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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0084100 |
| Transcript ID | LotjaGi5g1v0084100.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|A0A0L9TW93|A0A0L9TW93_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:14293303..14301040) extracted from Lotus japonicus Gifu genome v1.2.
TAAGAAAGAAAGAAAGAATGCTTCTCCTTCTCATAATAATTCAGGAAATGACTGATTCTAAAAAGCGATTATTGTAATCG ATAATCACTCGCTTCTCAATCATATCTCTCTAATGTGAAAGAAATCTCTTACATTAATTTTAGTTTTTCCACTTTCTCTC TCTCTATCGGTGTCTCTGTTTGTTTACCTTTCCTTCTTCTCTCTCGCCGGAACTTCGCCGCACCGATCTATTTTCCGGTG ATCCACCTCCGATGACTCTCCGCCATGATCCATAGCTTCCTCCATCTCCAAATCGCTATTTCTCACCATTCTCCACGCTC TTCTCCTTCTTCTCCTTCACCTTCTTCGCTCGTCGATTTCAGATCCCTTTCAATCATCGAATTCTAGGGTTAGGGTTACA CAATGTTCAAAAAAATCATGAAGGGAGGGCACAAGAAGCCCTCCAAATCGGACACCACCGACCCTCCGGTCCCCGGGAAT AACCGCAGCTCGGTGGCGGCGGCAATCCCTAATGTGGTTGTCAACCACGCCTCACGCGGCGGGGCTGCGGCGGCGAACTC TGCTGCTTCCGCGATGGTCCCTTTGACCCCATCGCCCGGCGCCATGGAGCCGGTGCCGGCGTTTCGCGATGTTCCGGTGT CGGATAGGCAAACCCTCTTCCTCAAGAAGCTGCACATATGCTGCTACGTGCTGGATTTCTCCGACACGCTGAAGAATGTG AGGGAGAAGGAGATCAAGCGGCAAGCGTTGATGGAGCTTGTGGACTTCATTCAATCGGGTTCCGGTAAGATATCGGAGAA TTGCCAGGAGGAGATGATCAGAATGATTTCCGTTAACATTTTCCGGTGTTTTCCGCCGCTGTCTCATGAGAATACCGGGC AGGAGCCGACCGATCCTGAAGAGGAGGAGATGTGCTTGGAACCGGCGTGGCCTCATTTGCAGCTTGTTTATGAGCTTCTG CTTAGATATGTTGTGTCTTCGGATACCGATACCAAGGTCGCGAAGCGGTACATTGATCACTCTTTTGTGCTCAAATTGCT TGATTTGTTTGACTCTGAGGACCCGAGAGAGCGTGAGTATTTGAAGACCATTCTGCATCGTATATATGGCAAGTTCATGG TTCACAGACCCTTCATCAGGAAGGCCATTAACAACATCTTTTATCGGTTTATATATGAGACCGAGAGACACAGCGGTATT GGGGAGCTTCTGGAGATTCTTGGGAGCATCATTAATGGATTTGCATTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGT GAGGGCGCTCCTGCCACTGCATAAGCCTAAGTCTGTTGCTATGTACCACCAGCAGTTGTCATACTGCATCACTCAGTTTG TGGAGAAAGATTTCAAGCTCGCGGATACGGTTATTAGGGGATTGTTGAAGTATTGGCCTCTCACTAATTGCCAGAAGGAG GTTCTCTTCCTCGGAGAACTGGAGGAAGTGCTGGAGGCCACACAGCCTGCTGAATTTCAACGCTGCATGGTTCAACTTTT TAGACAGATTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTCCTAGAAAATTCACTCTTTTCCCTTTTATAATGCTGT TAGCTGGGACTTTGAACTTTGGAGTAGGACTAGCTTTTTTCTGTTTTTCAAATTTTGGATTTGCAATATTAATACTTGTT GAACTGAACTGCTACCTTTTATGTCAGTATGATTACTTATACATCCAATCTAGGTTTATTATCTAACTTGCCATATTTCT ACTTAAACGCGGTTGTTTAGTTATGAAATATATCAACCTAGGGTGGTATTAGTTTCACTGCTTATTTAATAGACATTAAT TGTCACATCCCTTTTCTACTTTGCCTTTTATGGGACCAAACTCTATCATGATTCAATCCTTTTTTTTGTATATTTGTAGT GGTTCATTGCCTTTTAAACCATGCATCTATTCATGATGTGCTATTTGATAGGGAAAATAACTTCTATAAAATTTCACTAT ATATGAACATGAGAAGATTCCTTTTCCTATCTGACTTCATTGGTTTCTGGCCTTTTACATATAGAAATTCAAACATAGGC AGACACATGCACATGCATTTTTCATGTGCGAGGATTTCAAATTCATCATTGTTCATATTCTGCTTCAAAACTGAGTACTG AAATGACAAAGTTAACCATAATTGAAATTCAATAGATGGCTCTTATTTTACTTATTCATTTTGGAATTGTAAGCGTTATC TGTAATCATATAAACAGTAAAAAAAACCTTGGCATTTAGCAAAGACTATAATGGGTAACGGCCTTGTTTGGGATTCTGTT AATTTTCTATTTAATAGCCATAATCCTGAAATTGGTGATTTGCCTGACTAAATATTTTTGAAATCTCAGTTATTTGTTTA GTTCCTTTATTGTCATTACATTTATCATTTTTTGTTTATTATAACGTGACATGTATGTATGTATACATGAAGAATGCCAA CCTAGTTGGGACTGAATCTTGATATTGCAGCTTTGCTTAATATGGGTTAACTGTTCTATATGACCCCTGAGCACATTCCC CTCTGATTTAACATGATCCATTGCATTGTGGCACCTAATATCACAATCAAGGGTTAATTTTGATTGAATTAGAGTCACCT GCAAGTCACATGATCTATTTGCTTGAAATAAGAAACAAACAGACTGGAAGGACATAAGAACCTCCAATGAACTTTCCTTT GGGAAGCGGAGACGCTTCCTCAGTAAGTCATTGTAGTGGGTGACCTATCCTTTGCTCTCAATGAAAAAGAAATGGGGAAT ATTTTAATGGGAGATATCTGGTTCTCAAGATGCCAGCATCATCTAAAATTCTCCTCTTTACAGCCCTTCCCACTGAACAT TTGTAAATAAAGTTGCTCTCTTACGAAGATGATTACTAAACTAGTAAACATATACCTTTAAGGAACTGATGTGTTTGTGA TTGATAGGACTGAGTCGGAAAGCATAAAAACAGTGATTTTATTGATGAAAACAAGATGAATACAACTCTCCAGAACTTTT AAGGGGTCTGGACTCTCCTAACCTTTCCTGACTCAAACTGTTCCTCGAAGACCACTCATCATCTCTTCTTATAGGAAACA TGCCTTCTCATTAATCCACTAACACTGCTCTGACCAATTTACTAACTCCCATTGTTGTTATTATTACTACTATTATTATT GTTACTGTTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTCTGTTGACTAT TAACCAACTATAGCTAACAACACTCCCCTCTTAAACATTCACCTTATCCTCAAGATTAACAGTAGTTACGACCGGACTAC TCCTAGGAAATTACCCTATTCCTTCACAACGGGCTGCATGCTCACAATCTTCAATTTATGTGTCCTGTTCTTGCGAATGT GCTCAGGGCTATATTTTTCTTCACATGTGAAAGAAAGCCCTTTTGTTCTTCTATCATTGTATTCACCATCAGGAACCAGC CTTAACCCCTTAGTGTTGCTTCCTGTTCCCTCGGCCATCATCTTGTTTGGCTTGATAATAGTATTCTGCCCTATGCTACT GTCAGATTTGTTCCTAGTCTAAGCACTTCTCTAGCATTGTTTGAATTCTGCCAATTTTCATTGTTTTCAAAGAATCTTAA CCACCTGAGCTCCTCTGTCCCACTTCCTGTCTAGCTAGTTCGAAAAGAATCTCTTCTTGCTCCCTTCTGATCCTTATGGC CTCTTGCACAGACTGAGGTTTGTGTAGACTAAGAAATTTCTCCACGTGACTCCTAAGGTTTCCCAAGAATATACTTAATG CCACCGAATTCTCCCCAACAACCGTGGCCAGTGACTCATCAAAGTCTTTGCAATACTGTCCCAAAGTGTCTGTTTGCTTT CAACCGTGTAAGCTCTGATAAAGGATCCTCATAATTCCCATCATTAAACCTGCACCTAGCATCATAAAGAATTGGCCTTC ATGTCAAATTTTATTTCCCTTTCATCGCTGTATAATGCCTCAACCAAGCAAAGGCTTTTCCCTCCATAGCTATCAATAAC TACTTGGATTTCTGAATTTCAGGAACCTCCAACACACCGTATTGCTCACATCTTGCCCTCCATTCTCTGTATCCCAAACC ATCAGAAGATGACAAAGGAGTCTATGGTGCCTTTGCCACCCACTTTTTCCTCCCGTCACCACTTCTTCTTTCTCTCTCCC CTGTGATTATGCGAGTTTACTCTCTTCCATTGAGCACCAGCACCTTTTCCATAATCTCTTTTAGGGCCATCATACTCTGG CACATAACCTCAAACTGATCCCTGTTCTGCCACTGCATCTCCTCCAGCAAGCCCACTGCCTGAATTGAGCTCTAATACCA GTTCATAGGACTCCTCTGAAATAAGAGAAAAACACCGATTTTTTTTTTTGAAGAAAACTAGATGAGTACAACTCCCCAGG ACTTTCGAGAGGTCTGGACTCTTCTTACCTTTTCTTACTGAAACTGATACCCAAAGACCCCCCCCCCCCCCCGCCTCCTC TCCAATTCATCCCTTCTTCCTACTTTATAGGCAACATCCCTTATTTGTTATGACACTTAGTCACTTACAATCCACCGACT AACTAACTATACATAACAGTAATCTTGCTTTGTAATATATTAGTATGTAATGATTATTGATATGATACATTATATTCATA GAGAGCCAATATTGTTTTGTTTCCCCAGCTTCCTTTTCAGTTTTTTCAGATCAGATGGTCGTTAAGAGTGCTAATTTTCC ACACCCACTTGTCTTATATTAGGGTTTATTTATGCATCCTTGTACGGTTGAATGGACAGAGTATCTAAGAACTGGTTGTG ATTTCTATTTAATTATGTTTAATGCTAGATTTCGCTTAATCTATGTAATTGGTTATCATTTGGGAGGAACTCTTTCATAT GAATTCAATGTTAGCTCTTTATCATTTACTTCCAAATAAAAGTAAAAGTAGTGCTATTGATCCAGTGATTTCAAGGGCAA AGAGCAAATGAGCCTTCTTTTAACTTTTCTCTAATCCCTTCATACCTAATCTTGTATGGTCTTGTGTGTCCATTCATATA TTGTAACATAACATTCTCATCTTTGTAACATTGAGCTTATTTCCTTATTAGTTCTTTATCTCCAAATGTACAATCCCATA CAACAACACATGTCTTAGAGTTGTGTGGTAAAATTTTCATTTTGAAGCACAATAATATGCAAACCGCTCTTAAACTCAAC TCTAGCAAAAAAAGCCTCTACTGCTACTTTGGAAATTAACTAGCTTAAATTTCCATTAACTAATATGTGAAAAAAAGAAA GAAAGAAATGGGATCAGCTGAGCTACTGCTTGGCAGACCCAAACCCTAGCTTAGCTGATCCCATTTTTTTTCTTTCATTT ATTACTGCAAGACCTGTGGTTTTGTATGAGATTTTATGCTAGGAGATAAACAAAGAAGAAAATAATCTCAATGTTTCAAC GATGAGAATGTTATGATGGAAATACAAAACAAGATAGGATTAGGAATGAGCACATTAAAGAGAGAAATAGGGTAGCTAGC ACCTACTGTGGAAAAGATGATAAAATTTTGTTCTAAGTGGTTTGGATGTGTGGAGAAGCCTTAGAAAAATTCCAGTAATG AGAATAATTTGATGGAGGGTAGTTCATTATTTAGACGTAGAGGGAGACCAATAACTATTATAGGCCAAATCACCAAACCA CTAAGAAGGATGTAGATAAAATGGTTTATCGTTGGGAATGATTCTCAAGAGGACATAATGAGTTGTTTGATCCATGTAGC TAATCTAACCTAGTGGGTAAATTTTGTTGTTGTTATATTCAATACCTCTAAACATATGCATTGATTCAGTCTCTTATATT AAACAAGTGTTCTATTTACTTTTTAAGCTGCAGTATAGGTTTGTAGATGTTTTCATATGCAGATAAGTACTGTGAATGCT TTTATTAGCTTGACAGCTGTAGGTGTAAAATTTAGTCTCCTGGAAAATATTCATTCTGGAAGCTTGCCCTGATAGCTTTT TTAATTAGTGAGTGGTACTAAGGCTTATGCAAATCTTTAGTTTGCATTGTTGGATGAATATTGTACTTCCAGGACCTTTG AAGAAAATGGAAGGAGAAAACCTATTTATTCATAATCCTGAGCAAACAAGTGAAGGTTATGAACTGATAGAACTTATTCA TCTCTACATGCCAATGCACATACCCCTCTAAAATACACCCATTGGTGAACCACCATAATAAGTCTAAGATTTGGTTTTTG TCAATATAGGATTGAGTTAGGTTGAATTCAATTTGAGAGTACAATGTCTAAATGGCTTCCGACTGTGGTCTACATGTCAC AAATATTAATTGTCAAATCTTTTTAATCAGCTTATTGGGTTGTAATCTTGATCTGTAGAACTGAAATTTGTTTGCTGTTT TAGTTAATTTGTATAAATATTCCCGATGTCTTTGCTGAGGCAAACTTTCTATGCAGGTTGCAGAGAGAGCCCTCTTTTTG TGGAATAATGAGCACATTGTGAGCTTAATCGCTCAAAATAGGACTGTGATATTACCAATAATATTTGAGGCGTTTGAGAA AAACATCGAGTCTCATTGGCACCAAGCAGTTCACGGGCTGACTGTGAATGTTCGTAAAATGTTCATGGAAATGGATGCGG AATTGTTTGAAGAGTGCCAGAGGCAGCATGAAGAGAAACAGGCTAAAGCCAAAGAAATGGCTGAGCAGCGGGAACTGAAT TGGAAGAGACTGGCAGAAGCTGCTGCACAGAACGGGGTGGAGGATATGGTTACAGATTAGTGTTGTTAGTTTACTGCCTC AACTGCAAAGTGTGAATTAAATAGGTGAAGGGTCATTAACGTGCTCCTCTTTTCTATTTTGGTGCCATTATTTATTGATT TCTTTTGTTTTTCATACCATTTTTTTTTCTACTCTTCTATCTTATTATCTCAGTTTGGATAATTAGCAATTTGAAGAAAG AAGTGATTAATGTAACTTATTGGAAGCTGTTAGCTATGTCTGATGAGTAAGAATGTTCCTTGAAAAGCTTTCTTGTATTT TTCCCTTTTTACAAAAAGAAATGCAGAAAGTTTCTTTTCTTTATCCTATTTTTTATTCTCGCTTTTACACAAAATGACAG TACTTTGCAAAGGAGCATATGAGAATTATTAACAACACAGATTTTTACTCATTTATAATATTAGGTAAAATTTATGAGCT TTGCCAAATAGGGAGATTTTAATTTAAGAAAGCTGAATAATTTTGTAAGTGAATCAGATTAATTTTACTTGATAAATTAG CAGTACGTTGAAAAGTGCCATATTACCATAATTGATAAAGAAACTGTCTCTGGTGGGCGCTCCAGCTTTGACGAGAACTA GCTTTCTCACAGGTAGTCATAGAGACGCACTGTAAAACTTAGTCCTACTTCCATGATGTGGTTCTGGATTTTGGCTAGAT CTTTTGTAGGTTGTCAGTTTTCAAATAAGACCAGATACTTCTCACATACCAATTAGGCTCCAGACTTTATGTCAAAGCTT TGCATATTTGTTTTCAGATTCAGTTTGGGTAGAAGTAGGACCTGTTGGTTTGGAGCCGTATTTGGCAAAAAGGATTTGTA TTGTCTATGATTCTAGTAATTCAATGCAAGCATCTCTTTCCGAAACTGTTTTGAACTA
CDS sequence (LotjaGi5g1v0084100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAAAAAAATCATGAAGGGAGGGCACAAGAAGCCCTCCAAATCGGACACCACCGACCCTCCGGTCCCCGGGAATAA CCGCAGCTCGGTGGCGGCGGCAATCCCTAATGTGGTTGTCAACCACGCCTCACGCGGCGGGGCTGCGGCGGCGAACTCTG CTGCTTCCGCGATGGTCCCTTTGACCCCATCGCCCGGCGCCATGGAGCCGGTGCCGGCGTTTCGCGATGTTCCGGTGTCG GATAGGCAAACCCTCTTCCTCAAGAAGCTGCACATATGCTGCTACGTGCTGGATTTCTCCGACACGCTGAAGAATGTGAG GGAGAAGGAGATCAAGCGGCAAGCGTTGATGGAGCTTGTGGACTTCATTCAATCGGGTTCCGGTAAGATATCGGAGAATT GCCAGGAGGAGATGATCAGAATGATTTCCGTTAACATTTTCCGGTGTTTTCCGCCGCTGTCTCATGAGAATACCGGGCAG GAGCCGACCGATCCTGAAGAGGAGGAGATGTGCTTGGAACCGGCGTGGCCTCATTTGCAGCTTGTTTATGAGCTTCTGCT TAGATATGTTGTGTCTTCGGATACCGATACCAAGGTCGCGAAGCGGTACATTGATCACTCTTTTGTGCTCAAATTGCTTG ATTTGTTTGACTCTGAGGACCCGAGAGAGCGTGAGTATTTGAAGACCATTCTGCATCGTATATATGGCAAGTTCATGGTT CACAGACCCTTCATCAGGAAGGCCATTAACAACATCTTTTATCGGTTTATATATGAGACCGAGAGACACAGCGGTATTGG GGAGCTTCTGGAGATTCTTGGGAGCATCATTAATGGATTTGCATTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGTGA GGGCGCTCCTGCCACTGCATAAGCCTAAGTCTGTTGCTATGTACCACCAGCAGTTGTCATACTGCATCACTCAGTTTGTG GAGAAAGATTTCAAGCTCGCGGATACGGTTATTAGGGGATTGTTGAAGTATTGGCCTCTCACTAATTGCCAGAAGGAGGT TCTCTTCCTCGGAGAACTGGAGGAAGTGCTGGAGGCCACACAGCCTGCTGAATTTCAACGCTGCATGGTTCAACTTTTTA GACAGATTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAGAGAGCCCTCTTTTTGTGGAATAATGAGCACATT GTGAGCTTAATCGCTCAAAATAGGACTGTGATATTACCAATAATATTTGAGGCGTTTGAGAAAAACATCGAGTCTCATTG GCACCAAGCAGTTCACGGGCTGACTGTGAATGTTCGTAAAATGTTCATGGAAATGGATGCGGAATTGTTTGAAGAGTGCC AGAGGCAGCATGAAGAGAAACAGGCTAAAGCCAAAGAAATGGCTGAGCAGCGGGAACTGAATTGGAAGAGACTGGCAGAA GCTGCTGCACAGAACGGGGTGGAGGATATGGTTACAGATTAG
Protein sequence (LotjaGi5g1v0084100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFKKIMKGGHKKPSKSDTTDPPVPGNNRSSVAAAIPNVVVNHASRGGAAAANSAASAMVPLTPSPGAMEPVPAFRDVPVS DRQTLFLKKLHICCYVLDFSDTLKNVREKEIKRQALMELVDFIQSGSGKISENCQEEMIRMISVNIFRCFPPLSHENTGQ EPTDPEEEEMCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMV HRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVAMYHQQLSYCITQFV EKDFKLADTVIRGLLKYWPLTNCQKEVLFLGELEEVLEATQPAEFQRCMVQLFRQIARCLNSSHFQVAERALFLWNNEHI VSLIAQNRTVILPIIFEAFEKNIESHWHQAVHGLTVNVRKMFMEMDAELFEECQRQHEEKQAKAKEMAEQRELNWKRLAE AAAQNGVEDMVTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PANTHER | 1 | 488 | 488 | 1.3E-287 | – | |
| PANTHER | 1 | 488 | 488 | 1.3E-287 | ||
| PIRSF | 6 | 493 | 488 | 8.8E-241 | ||
| Pfam | 72 | 482 | 411 | 2.2E-190 | ||
| Gene3D | 78 | 481 | 404 | 3.9E-189 | ||
| SUPERFAMILY | 83 | 464 | 382 | 1.07E-158 | ||
| Coils | 450 | 470 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi5g1v0084100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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