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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0084100 |
| Transcript ID | LotjaGi5g1v0084100.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|K7LZS7|K7LZS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:14294181..14300623) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGGGAGGGCACAAGAAGCCCTCCAAATCGGACACCACCGACCCTCCGGTCCCCGGGAATAACCGCAGCTCGGTGGC GGCGGCAATCCCTAATGTGGTTGTCAACCACGCCTCACGCGGCGGGGCTGCGGCGGCGAACTCTGCTGCTTCCGCGATGG TCCCTTTGACCCCATCGCCCGGCGCCATGGAGCCGGTGCCGGCGTTTCGCGATGTTCCGGTGTCGGATAGGCAAACCCTC TTCCTCAAGAAGCTGCACATATGCTGCTACGTGCTGGATTTCTCCGACACGCTGAAGAATGTGAGGGAGAAGGAGATCAA GCGGCAAGCGTTGATGGAGCTTGTGGACTTCATTCAATCGGGTTCCGGTAAGATATCGGAGAATTGCCAGGAGGAGATGA TCAGAATGATTTCCGTTAACATTTTCCGGTGTTTTCCGCCGCTGTCTCATGAGAATACCGGGCAGGAGCCGACCGATCCT GAAGAGGAGGAGATGTGCTTGGAACCGGCGTGGCCTCATTTGCAGCTTGTTTATGAGCTTCTGCTTAGATATGTTGTGTC TTCGGATACCGATACCAAGGTCGCGAAGCGGTACATTGATCACTCTTTTGTGCTCAAATTGCTTGATTTGTTTGACTCTG AGGACCCGAGAGAGCGTGAGTATTTGAAGACCATTCTGCATCGTATATATGGCAAGTTCATGGTTCACAGACCCTTCATC AGGAAGGCCATTAACAACATCTTTTATCGGTTTATATATGAGACCGAGAGACACAGCGGTATTGGGGAGCTTCTGGAGAT TCTTGGGAGCATCATTAATGGATTTGCATTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGTGAGGGCGCTCCTGCCAC TGCATAAGCCTAAGTCTGTTGCTATGTACCACCAGCAGTTGTCATACTGCATCACTCAGTTTGTGGAGAAAGATTTCAAG CTCGCGGATACGGTTATTAGGGGATTGTTGAAGTATTGGCCTCTCACTAATTGCCAGAAGGAGGTTCTCTTCCTCGGAGA ACTGGAGGAAGTGCTGGAGGCCACACAGCCTGCTGAATTTCAACGCTGCATGGTTCAACTTTTTAGACAGATTGCCCGCT GCCTCAATAGTTCTCACTTTCAGGTTCCTAGAAAATTCACTCTTTTCCCTTTTATAATGCTGTTAGCTGGGACTTTGAAC TTTGGAGTAGGACTAGCTTTTTTCTGTTTTTCAAATTTTGGATTTGCAATATTAATACTTGTTGAACTGAACTGCTACCT TTTATGTCAGTATGATTACTTATACATCCAATCTAGGTTTATTATCTAACTTGCCATATTTCTACTTAAACGCGGTTGTT TAGTTATGAAATATATCAACCTAGGGTGGTATTAGTTTCACTGCTTATTTAATAGACATTAATTGTCACATCCCTTTTCT ACTTTGCCTTTTATGGGACCAAACTCTATCATGATTCAATCCTTTTTTTTGTATATTTGTAGTGGTTCATTGCCTTTTAA ACCATGCATCTATTCATGATGTGCTATTTGATAGGGAAAATAACTTCTATAAAATTTCACTATATATGAACATGAGAAGA TTCCTTTTCCTATCTGACTTCATTGGTTTCTGGCCTTTTACATATAGAAATTCAAACATAGGCAGACACATGCACATGCA TTTTTCATGTGCGAGGATTTCAAATTCATCATTGTTCATATTCTGCTTCAAAACTGAGTACTGAAATGACAAAGTTAACC ATAATTGAAATTCAATAGATGGCTCTTATTTTACTTATTCATTTTGGAATTGTAAGCGTTATCTGTAATCATATAAACAG TAAAAAAAACCTTGGCATTTAGCAAAGACTATAATGGGTAACGGCCTTGTTTGGGATTCTGTTAATTTTCTATTTAATAG CCATAATCCTGAAATTGGTGATTTGCCTGACTAAATATTTTTGAAATCTCAGTTATTTGTTTAGTTCCTTTATTGTCATT ACATTTATCATTTTTTGTTTATTATAACGTGACATGTATGTATGTATACATGAAGAATGCCAACCTAGTTGGGACTGAAT CTTGATATTGCAGCTTTGCTTAATATGGGTTAACTGTTCTATATGACCCCTGAGCACATTCCCCTCTGATTTAACATGAT CCATTGCATTGTGGCACCTAATATCACAATCAAGGGTTAATTTTGATTGAATTAGAGTCACCTGCAAGTCACATGATCTA TTTGCTTGAAATAAGAAACAAACAGACTGGAAGGACATAAGAACCTCCAATGAACTTTCCTTTGGGAAGCGGAGACGCTT CCTCAGTAAGTCATTGTAGTGGGTGACCTATCCTTTGCTCTCAATGAAAAAGAAATGGGGAATATTTTAATGGGAGATAT CTGGTTCTCAAGATGCCAGCATCATCTAAAATTCTCCTCTTTACAGCCCTTCCCACTGAACATTTGTAAATAAAGTTGCT CTCTTACGAAGATGATTACTAAACTAGTAAACATATACCTTTAAGGAACTGATGTGTTTGTGATTGATAGGACTGAGTCG GAAAGCATAAAAACAGTGATTTTATTGATGAAAACAAGATGAATACAACTCTCCAGAACTTTTAAGGGGTCTGGACTCTC CTAACCTTTCCTGACTCAAACTGTTCCTCGAAGACCACTCATCATCTCTTCTTATAGGAAACATGCCTTCTCATTAATCC ACTAACACTGCTCTGACCAATTTACTAACTCCCATTGTTGTTATTATTACTACTATTATTATTGTTACTGTTACTATTAT TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTCTGTTGACTATTAACCAACTATAGCTAA CAACACTCCCCTCTTAAACATTCACCTTATCCTCAAGATTAACAGTAGTTACGACCGGACTACTCCTAGGAAATTACCCT ATTCCTTCACAACGGGCTGCATGCTCACAATCTTCAATTTATGTGTCCTGTTCTTGCGAATGTGCTCAGGGCTATATTTT TCTTCACATGTGAAAGAAAGCCCTTTTGTTCTTCTATCATTGTATTCACCATCAGGAACCAGCCTTAACCCCTTAGTGTT GCTTCCTGTTCCCTCGGCCATCATCTTGTTTGGCTTGATAATAGTATTCTGCCCTATGCTACTGTCAGATTTGTTCCTAG TCTAAGCACTTCTCTAGCATTGTTTGAATTCTGCCAATTTTCATTGTTTTCAAAGAATCTTAACCACCTGAGCTCCTCTG TCCCACTTCCTGTCTAGCTAGTTCGAAAAGAATCTCTTCTTGCTCCCTTCTGATCCTTATGGCCTCTTGCACAGACTGAG GTTTGTGTAGACTAAGAAATTTCTCCACGTGACTCCTAAGGTTTCCCAAGAATATACTTAATGCCACCGAATTCTCCCCA ACAACCGTGGCCAGTGACTCATCAAAGTCTTTGCAATACTGTCCCAAAGTGTCTGTTTGCTTTCAACCGTGTAAGCTCTG ATAAAGGATCCTCATAATTCCCATCATTAAACCTGCACCTAGCATCATAAAGAATTGGCCTTCATGTCAAATTTTATTTC CCTTTCATCGCTGTATAATGCCTCAACCAAGCAAAGGCTTTTCCCTCCATAGCTATCAATAACTACTTGGATTTCTGAAT TTCAGGAACCTCCAACACACCGTATTGCTCACATCTTGCCCTCCATTCTCTGTATCCCAAACCATCAGAAGATGACAAAG GAGTCTATGGTGCCTTTGCCACCCACTTTTTCCTCCCGTCACCACTTCTTCTTTCTCTCTCCCCTGTGATTATGCGAGTT TACTCTCTTCCATTGAGCACCAGCACCTTTTCCATAATCTCTTTTAGGGCCATCATACTCTGGCACATAACCTCAAACTG ATCCCTGTTCTGCCACTGCATCTCCTCCAGCAAGCCCACTGCCTGAATTGAGCTCTAATACCAGTTCATAGGACTCCTCT GAAATAAGAGAAAAACACCGATTTTTTTTTTTGAAGAAAACTAGATGAGTACAACTCCCCAGGACTTTCGAGAGGTCTGG ACTCTTCTTACCTTTTCTTACTGAAACTGATACCCAAAGACCCCCCCCCCCCCCCGCCTCCTCTCCAATTCATCCCTTCT TCCTACTTTATAGGCAACATCCCTTATTTGTTATGACACTTAGTCACTTACAATCCACCGACTAACTAACTATACATAAC AGTAATCTTGCTTTGTAATATATTAGTATGTAATGATTATTGATATGATACATTATATTCATAGAGAGCCAATATTGTTT TGTTTCCCCAGCTTCCTTTTCAGTTTTTTCAGATCAGATGGTCGTTAAGAGTGCTAATTTTCCACACCCACTTGTCTTAT ATTAGGGTTTATTTATGCATCCTTGTACGGTTGAATGGACAGAGTATCTAAGAACTGGTTGTGATTTCTATTTAATTATG TTTAATGCTAGATTTCGCTTAATCTATGTAATTGGTTATCATTTGGGAGGAACTCTTTCATATGAATTCAATGTTAGCTC TTTATCATTTACTTCCAAATAAAAGTAAAAGTAGTGCTATTGATCCAGTGATTTCAAGGGCAAAGAGCAAATGAGCCTTC TTTTAACTTTTCTCTAATCCCTTCATACCTAATCTTGTATGGTCTTGTGTGTCCATTCATATATTGTAACATAACATTCT CATCTTTGTAACATTGAGCTTATTTCCTTATTAGTTCTTTATCTCCAAATGTACAATCCCATACAACAACACATGTCTTA GAGTTGTGTGGTAAAATTTTCATTTTGAAGCACAATAATATGCAAACCGCTCTTAAACTCAACTCTAGCAAAAAAAGCCT CTACTGCTACTTTGGAAATTAACTAGCTTAAATTTCCATTAACTAATATGTGAAAAAAAGAAAGAAAGAAATGGGATCAG CTGAGCTACTGCTTGGCAGACCCAAACCCTAGCTTAGCTGATCCCATTTTTTTTCTTTCATTTATTACTGCAAGACCTGT GGTTTTGTATGAGATTTTATGCTAGGAGATAAACAAAGAAGAAAATAATCTCAATGTTTCAACGATGAGAATGTTATGAT GGAAATACAAAACAAGATAGGATTAGGAATGAGCACATTAAAGAGAGAAATAGGGTAGCTAGCACCTACTGTGGAAAAGA TGATAAAATTTTGTTCTAAGTGGTTTGGATGTGTGGAGAAGCCTTAGAAAAATTCCAGTAATGAGAATAATTTGATGGAG GGTAGTTCATTATTTAGACGTAGAGGGAGACCAATAACTATTATAGGCCAAATCACCAAACCACTAAGAAGGATGTAGAT AAAATGGTTTATCGTTGGGAATGATTCTCAAGAGGACATAATGAGTTGTTTGATCCATGTAGCTAATCTAACCTAGTGGG TAAATTTTGTTGTTGTTATATTCAATACCTCTAAACATATGCATTGATTCAGTCTCTTATATTAAACAAGTGTTCTATTT ACTTTTTAAGCTGCAGTATAGGTTTGTAGATGTTTTCATATGCAGATAAGTACTGTGAATGCTTTTATTAGCTTGACAGC TGTAGGTGTAAAATTTAGTCTCCTGGAAAATATTCATTCTGGAAGCTTGCCCTGATAGCTTTTTTAATTAGTGAGTGGTA CTAAGGCTTATGCAAATCTTTAGTTTGCATTGTTGGATGAATATTGTACTTCCAGGACCTTTGAAGAAAATGGAAGGAGA AAACCTATTTATTCATAATCCTGAGCAAACAAGTGAAGGTTATGAACTGATAGAACTTATTCATCTCTACATGCCAATGC ACATACCCCTCTAAAATACACCCATTGGTGAACCACCATAATAAGTCTAAGATTTGGTTTTTGTCAATATAGGATTGAGT TAGGTTGAATTCAATTTGAGAGTACAATGTCTAAATGGCTTCCGACTGTGGTCTACATGTCACAAATATTAATTGTCAAA TCTTTTTAATCAGCTTATTGGGTTGTAATCTTGATCTGTAGAACTGAAATTTGTTTGCTGTTTTAGTTAATTTGTATAAA TATTCCCGATGTCTTTGCTGAGGCAAACTTTCTATGCAGGTTGCAGAGAGAGCCCTCTTTTTGTGGAATAATGAGCACAT TGTGAGCTTAATCGCTCAAAATAGGACTGTGATATTACCAATAATATTTGAGGCGTTTGAGAAAAACATCGAGTCTCATT GGCACCAAGCAGTTCACGGGCTGACTGTGAATGTTCGTAAAATGTTCATGGAAATGGATGCGGAATTGTTTGAAGAGTGC CAGAGGCAGCATGAAGAGAAACAGGCTAAAGCCAAAGAAATGGCTGAGCAGCGGGAACTGAATTGGAAGAGACTGGCAGA AGCTGCTGCACAGAACGGGGTGGAGGATATGGTTACAGATTAG
CDS sequence (LotjaGi5g1v0084100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCCCTTTGACCCCATCGCCCGGCGCCATGGAGCCGGTGCCGGCGTTTCGCGATGTTCCGGTGTCGGATAGGCAAAC CCTCTTCCTCAAGAAGCTGCACATATGCTGCTACGTGCTGGATTTCTCCGACACGCTGAAGAATGTGAGGGAGAAGGAGA TCAAGCGGCAAGCGTTGATGGAGCTTGTGGACTTCATTCAATCGGGTTCCGGTAAGATATCGGAGAATTGCCAGGAGGAG ATGATCAGAATGATTTCCGTTAACATTTTCCGGTGTTTTCCGCCGCTGTCTCATGAGAATACCGGGCAGGAGCCGACCGA TCCTGAAGAGGAGGAGATGTGCTTGGAACCGGCGTGGCCTCATTTGCAGCTTGTTTATGAGCTTCTGCTTAGATATGTTG TGTCTTCGGATACCGATACCAAGGTCGCGAAGCGGTACATTGATCACTCTTTTGTGCTCAAATTGCTTGATTTGTTTGAC TCTGAGGACCCGAGAGAGCGTGAGTATTTGAAGACCATTCTGCATCGTATATATGGCAAGTTCATGGTTCACAGACCCTT CATCAGGAAGGCCATTAACAACATCTTTTATCGGTTTATATATGAGACCGAGAGACACAGCGGTATTGGGGAGCTTCTGG AGATTCTTGGGAGCATCATTAATGGATTTGCATTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGTGAGGGCGCTCCTG CCACTGCATAAGCCTAAGTCTGTTGCTATGTACCACCAGCAGTTGTCATACTGCATCACTCAGTTTGTGGAGAAAGATTT CAAGCTCGCGGATACGGTTATTAGGGGATTGTTGAAGTATTGGCCTCTCACTAATTGCCAGAAGGAGGTTCTCTTCCTCG GAGAACTGGAGGAAGTGCTGGAGGCCACACAGCCTGCTGAATTTCAACGCTGCATGGTTCAACTTTTTAGACAGATTGCC CGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAGAGAGCCCTCTTTTTGTGGAATAATGAGCACATTGTGAGCTTAAT CGCTCAAAATAGGACTGTGATATTACCAATAATATTTGAGGCGTTTGAGAAAAACATCGAGTCTCATTGGCACCAAGCAG TTCACGGGCTGACTGTGAATGTTCGTAAAATGTTCATGGAAATGGATGCGGAATTGTTTGAAGAGTGCCAGAGGCAGCAT GAAGAGAAACAGGCTAAAGCCAAAGAAATGGCTGAGCAGCGGGAACTGAATTGGAAGAGACTGGCAGAAGCTGCTGCACA GAACGGGGTGGAGGATATGGTTACAGATTAG
Protein sequence (LotjaGi5g1v0084100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVPLTPSPGAMEPVPAFRDVPVSDRQTLFLKKLHICCYVLDFSDTLKNVREKEIKRQALMELVDFIQSGSGKISENCQEE MIRMISVNIFRCFPPLSHENTGQEPTDPEEEEMCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFD SEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALL PLHKPKSVAMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPLTNCQKEVLFLGELEEVLEATQPAEFQRCMVQLFRQIA RCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVILPIIFEAFEKNIESHWHQAVHGLTVNVRKMFMEMDAELFEECQRQH EEKQAKAKEMAEQRELNWKRLAEAAAQNGVEDMVTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 4 | 436 | 433 | 3.3E-238 | ||
| PANTHER | 6 | 431 | 426 | 7.1E-280 | – | |
| PANTHER | 6 | 431 | 426 | 7.1E-280 | ||
| Pfam | 15 | 425 | 411 | 1.4E-190 | ||
| Gene3D | 21 | 424 | 404 | 2.5E-189 | ||
| SUPERFAMILY | 26 | 407 | 382 | 7.53E-159 | ||
| Coils | 393 | 413 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi5g1v0084100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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