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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0084100 |
| Transcript ID | LotjaGi5g1v0084100.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|K7LZS7|K7LZS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:14294181..14300638) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCAAAAAAATCATGAAGGGAGGGCACAAGAAGCCCTCCAAATCGGACACCACCGACCCTCCGGTCCCCGGGAATAA CCGCAGCTCGGTGGCGGCGGCAATCCCTAATGTGGTTGTCAACCACGCCTCACGCGGCGGGGCTGCGGCGGCGAACTCTG CTGCTTCCGCGATGGTCCCTTTGACCCCATCGCCCGGCGCCATGGAGCCGGTGCCGGCGTTTCGCGATGTTCCGGTGTCG GATAGGCAAACCCTCTTCCTCAAGAAGCTGCACATATGCTGCTACGTGCTGGATTTCTCCGACACGCTGAAGAATGTGAG GGAGAAGGAGATCAAGCGGCAAGCGTTGATGGAGCTTGTGGACTTCATTCAATCGGGTTCCGGTAAGATATCGGAGAATT GCCAGGAGGAGATGATCAGAATGATTTCCGTTAACATTTTCCGGTGTTTTCCGCCGCTGTCTCATGAGAATACCGGGCAG GAGCCGACCGATCCTGAAGAGGAGGAGATGTGCTTGGAACCGGCGTGGCCTCATTTGCAGCTTGTTTATGAGCTTCTGCT TAGATATGTTGTGTCTTCGGATACCGATACCAAGGTCGCGAAGCGGTACATTGATCACTCTTTTGTGCTCAAATTGCTTG ATTTGTTTGACTCTGAGGACCCGAGAGAGCGTGAGTATTTGAAGACCATTCTGCATCGTATATATGGCAAGTTCATGGTT CACAGACCCTTCATCAGGAAGGCCATTAACAACATCTTTTATCGGTTTATATATGAGACCGAGAGACACAGCGGTATTGG GGAGCTTCTGGAGATTCTTGGGAGCATCATTAATGGATTTGCATTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGTGA GGGCGCTCCTGCCACTGCATAAGCCTAAGTCTGTTGCTATGTACCACCAGCAGTTGTCATACTGCATCACTCAGTTTGTG GAGAAAGATTTCAAGCTCGCGGATACGGTTATTAGGGGATTGTTGAAGTATTGGCCTCTCACTAATTGCCAGAAGGAGGT TCTCTTCCTCGGAGAACTGGAGGAAGTGCTGGAGGCCACACAGCCTGCTGAATTTCAACGCTGCATGGTTCAACTTTTTA GACAGATTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTCCTAGAAAATTCACTCTTTTCCCTTTTATAATGCTGTTA GCTGGGACTTTGAACTTTGGAGTAGGACTAGCTTTTTTCTGTTTTTCAAATTTTGGATTTGCAATATTAATACTTGTTGA ACTGAACTGCTACCTTTTATGTCAGTATGATTACTTATACATCCAATCTAGGTTTATTATCTAACTTGCCATATTTCTAC TTAAACGCGGTTGTTTAGTTATGAAATATATCAACCTAGGGTGGTATTAGTTTCACTGCTTATTTAATAGACATTAATTG TCACATCCCTTTTCTACTTTGCCTTTTATGGGACCAAACTCTATCATGATTCAATCCTTTTTTTTGTATATTTGTAGTGG TTCATTGCCTTTTAAACCATGCATCTATTCATGATGTGCTATTTGATAGGGAAAATAACTTCTATAAAATTTCACTATAT ATGAACATGAGAAGATTCCTTTTCCTATCTGACTTCATTGGTTTCTGGCCTTTTACATATAGAAATTCAAACATAGGCAG ACACATGCACATGCATTTTTCATGTGCGAGGATTTCAAATTCATCATTGTTCATATTCTGCTTCAAAACTGAGTACTGAA ATGACAAAGTTAACCATAATTGAAATTCAATAGATGGCTCTTATTTTACTTATTCATTTTGGAATTGTAAGCGTTATCTG TAATCATATAAACAGTAAAAAAAACCTTGGCATTTAGCAAAGACTATAATGGGTAACGGCCTTGTTTGGGATTCTGTTAA TTTTCTATTTAATAGCCATAATCCTGAAATTGGTGATTTGCCTGACTAAATATTTTTGAAATCTCAGTTATTTGTTTAGT TCCTTTATTGTCATTACATTTATCATTTTTTGTTTATTATAACGTGACATGTATGTATGTATACATGAAGAATGCCAACC TAGTTGGGACTGAATCTTGATATTGCAGCTTTGCTTAATATGGGTTAACTGTTCTATATGACCCCTGAGCACATTCCCCT CTGATTTAACATGATCCATTGCATTGTGGCACCTAATATCACAATCAAGGGTTAATTTTGATTGAATTAGAGTCACCTGC AAGTCACATGATCTATTTGCTTGAAATAAGAAACAAACAGACTGGAAGGACATAAGAACCTCCAATGAACTTTCCTTTGG GAAGCGGAGACGCTTCCTCAGTAAGTCATTGTAGTGGGTGACCTATCCTTTGCTCTCAATGAAAAAGAAATGGGGAATAT TTTAATGGGAGATATCTGGTTCTCAAGATGCCAGCATCATCTAAAATTCTCCTCTTTACAGCCCTTCCCACTGAACATTT GTAAATAAAGTTGCTCTCTTACGAAGATGATTACTAAACTAGTAAACATATACCTTTAAGGAACTGATGTGTTTGTGATT GATAGGACTGAGTCGGAAAGCATAAAAACAGTGATTTTATTGATGAAAACAAGATGAATACAACTCTCCAGAACTTTTAA GGGGTCTGGACTCTCCTAACCTTTCCTGACTCAAACTGTTCCTCGAAGACCACTCATCATCTCTTCTTATAGGAAACATG CCTTCTCATTAATCCACTAACACTGCTCTGACCAATTTACTAACTCCCATTGTTGTTATTATTACTACTATTATTATTGT TACTGTTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTCTGTTGACTATTA ACCAACTATAGCTAACAACACTCCCCTCTTAAACATTCACCTTATCCTCAAGATTAACAGTAGTTACGACCGGACTACTC CTAGGAAATTACCCTATTCCTTCACAACGGGCTGCATGCTCACAATCTTCAATTTATGTGTCCTGTTCTTGCGAATGTGC TCAGGGCTATATTTTTCTTCACATGTGAAAGAAAGCCCTTTTGTTCTTCTATCATTGTATTCACCATCAGGAACCAGCCT TAACCCCTTAGTGTTGCTTCCTGTTCCCTCGGCCATCATCTTGTTTGGCTTGATAATAGTATTCTGCCCTATGCTACTGT CAGATTTGTTCCTAGTCTAAGCACTTCTCTAGCATTGTTTGAATTCTGCCAATTTTCATTGTTTTCAAAGAATCTTAACC ACCTGAGCTCCTCTGTCCCACTTCCTGTCTAGCTAGTTCGAAAAGAATCTCTTCTTGCTCCCTTCTGATCCTTATGGCCT CTTGCACAGACTGAGGTTTGTGTAGACTAAGAAATTTCTCCACGTGACTCCTAAGGTTTCCCAAGAATATACTTAATGCC ACCGAATTCTCCCCAACAACCGTGGCCAGTGACTCATCAAAGTCTTTGCAATACTGTCCCAAAGTGTCTGTTTGCTTTCA ACCGTGTAAGCTCTGATAAAGGATCCTCATAATTCCCATCATTAAACCTGCACCTAGCATCATAAAGAATTGGCCTTCAT GTCAAATTTTATTTCCCTTTCATCGCTGTATAATGCCTCAACCAAGCAAAGGCTTTTCCCTCCATAGCTATCAATAACTA CTTGGATTTCTGAATTTCAGGAACCTCCAACACACCGTATTGCTCACATCTTGCCCTCCATTCTCTGTATCCCAAACCAT CAGAAGATGACAAAGGAGTCTATGGTGCCTTTGCCACCCACTTTTTCCTCCCGTCACCACTTCTTCTTTCTCTCTCCCCT GTGATTATGCGAGTTTACTCTCTTCCATTGAGCACCAGCACCTTTTCCATAATCTCTTTTAGGGCCATCATACTCTGGCA CATAACCTCAAACTGATCCCTGTTCTGCCACTGCATCTCCTCCAGCAAGCCCACTGCCTGAATTGAGCTCTAATACCAGT TCATAGGACTCCTCTGAAATAAGAGAAAAACACCGATTTTTTTTTTTGAAGAAAACTAGATGAGTACAACTCCCCAGGAC TTTCGAGAGGTCTGGACTCTTCTTACCTTTTCTTACTGAAACTGATACCCAAAGACCCCCCCCCCCCCCCGCCTCCTCTC CAATTCATCCCTTCTTCCTACTTTATAGGCAACATCCCTTATTTGTTATGACACTTAGTCACTTACAATCCACCGACTAA CTAACTATACATAACAGTAATCTTGCTTTGTAATATATTAGTATGTAATGATTATTGATATGATACATTATATTCATAGA GAGCCAATATTGTTTTGTTTCCCCAGCTTCCTTTTCAGTTTTTTCAGATCAGATGGTCGTTAAGAGTGCTAATTTTCCAC ACCCACTTGTCTTATATTAGGGTTTATTTATGCATCCTTGTACGGTTGAATGGACAGAGTATCTAAGAACTGGTTGTGAT TTCTATTTAATTATGTTTAATGCTAGATTTCGCTTAATCTATGTAATTGGTTATCATTTGGGAGGAACTCTTTCATATGA ATTCAATGTTAGCTCTTTATCATTTACTTCCAAATAAAAGTAAAAGTAGTGCTATTGATCCAGTGATTTCAAGGGCAAAG AGCAAATGAGCCTTCTTTTAACTTTTCTCTAATCCCTTCATACCTAATCTTGTATGGTCTTGTGTGTCCATTCATATATT GTAACATAACATTCTCATCTTTGTAACATTGAGCTTATTTCCTTATTAGTTCTTTATCTCCAAATGTACAATCCCATACA ACAACACATGTCTTAGAGTTGTGTGGTAAAATTTTCATTTTGAAGCACAATAATATGCAAACCGCTCTTAAACTCAACTC TAGCAAAAAAAGCCTCTACTGCTACTTTGGAAATTAACTAGCTTAAATTTCCATTAACTAATATGTGAAAAAAAGAAAGA AAGAAATGGGATCAGCTGAGCTACTGCTTGGCAGACCCAAACCCTAGCTTAGCTGATCCCATTTTTTTTCTTTCATTTAT TACTGCAAGACCTGTGGTTTTGTATGAGATTTTATGCTAGGAGATAAACAAAGAAGAAAATAATCTCAATGTTTCAACGA TGAGAATGTTATGATGGAAATACAAAACAAGATAGGATTAGGAATGAGCACATTAAAGAGAGAAATAGGGTAGCTAGCAC CTACTGTGGAAAAGATGATAAAATTTTGTTCTAAGTGGTTTGGATGTGTGGAGAAGCCTTAGAAAAATTCCAGTAATGAG AATAATTTGATGGAGGGTAGTTCATTATTTAGACGTAGAGGGAGACCAATAACTATTATAGGCCAAATCACCAAACCACT AAGAAGGATGTAGATAAAATGGTTTATCGTTGGGAATGATTCTCAAGAGGACATAATGAGTTGTTTGATCCATGTAGCTA ATCTAACCTAGTGGGTAAATTTTGTTGTTGTTATATTCAATACCTCTAAACATATGCATTGATTCAGTCTCTTATATTAA ACAAGTGTTCTATTTACTTTTTAAGCTGCAGTATAGGTTTGTAGATGTTTTCATATGCAGATAAGTACTGTGAATGCTTT TATTAGCTTGACAGCTGTAGGTGTAAAATTTAGTCTCCTGGAAAATATTCATTCTGGAAGCTTGCCCTGATAGCTTTTTT AATTAGTGAGTGGTACTAAGGCTTATGCAAATCTTTAGTTTGCATTGTTGGATGAATATTGTACTTCCAGGACCTTTGAA GAAAATGGAAGGAGAAAACCTATTTATTCATAATCCTGAGCAAACAAGTGAAGGTTATGAACTGATAGAACTTATTCATC TCTACATGCCAATGCACATACCCCTCTAAAATACACCCATTGGTGAACCACCATAATAAGTCTAAGATTTGGTTTTTGTC AATATAGGATTGAGTTAGGTTGAATTCAATTTGAGAGTACAATGTCTAAATGGCTTCCGACTGTGGTCTACATGTCACAA ATATTAATTGTCAAATCTTTTTAATCAGCTTATTGGGTTGTAATCTTGATCTGTAGAACTGAAATTTGTTTGCTGTTTTA GTTAATTTGTATAAATATTCCCGATGTCTTTGCTGAGGCAAACTTTCTATGCAGGTTGCAGAGAGAGCCCTCTTTTTGTG GAATAATGAGCACATTGTGAGCTTAATCGCTCAAAATAGGACTGTGATATTACCAATAATATTTGAGGCGTTTGAGAAAA ACATCGAGTCTCATTGGCACCAAGCAGTTCACGGGCTGACTGTGAATGTTCGTAAAATGTTCATGGAAATGGATGCGGAA TTGTTTGAAGAGTGCCAGAGGCAGCATGAAGAGAAACAGGCTAAAGCCAAAGAAATGGCTGAGCAGCGGGAACTGAATTG GAAGAGACTGGCAGAAGCTGCTGCACAGAACGGGGTGGAGGATATGGTTACAGATTAG
CDS sequence (LotjaGi5g1v0084100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCCGGTGCCGGCGTTTCGCGATGTTCCGGTGTCGGATAGGCAAACCCTCTTCCTCAAGAAGCTGCACATATGCTG CTACGTGCTGGATTTCTCCGACACGCTGAAGAATGTGAGGGAGAAGGAGATCAAGCGGCAAGCGTTGATGGAGCTTGTGG ACTTCATTCAATCGGGTTCCGGTAAGATATCGGAGAATTGCCAGGAGGAGATGATCAGAATGATTTCCGTTAACATTTTC CGGTGTTTTCCGCCGCTGTCTCATGAGAATACCGGGCAGGAGCCGACCGATCCTGAAGAGGAGGAGATGTGCTTGGAACC GGCGTGGCCTCATTTGCAGCTTGTTTATGAGCTTCTGCTTAGATATGTTGTGTCTTCGGATACCGATACCAAGGTCGCGA AGCGGTACATTGATCACTCTTTTGTGCTCAAATTGCTTGATTTGTTTGACTCTGAGGACCCGAGAGAGCGTGAGTATTTG AAGACCATTCTGCATCGTATATATGGCAAGTTCATGGTTCACAGACCCTTCATCAGGAAGGCCATTAACAACATCTTTTA TCGGTTTATATATGAGACCGAGAGACACAGCGGTATTGGGGAGCTTCTGGAGATTCTTGGGAGCATCATTAATGGATTTG CATTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGTGAGGGCGCTCCTGCCACTGCATAAGCCTAAGTCTGTTGCTATG TACCACCAGCAGTTGTCATACTGCATCACTCAGTTTGTGGAGAAAGATTTCAAGCTCGCGGATACGGTTATTAGGGGATT GTTGAAGTATTGGCCTCTCACTAATTGCCAGAAGGAGGTTCTCTTCCTCGGAGAACTGGAGGAAGTGCTGGAGGCCACAC AGCCTGCTGAATTTCAACGCTGCATGGTTCAACTTTTTAGACAGATTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTT GCAGAGAGAGCCCTCTTTTTGTGGAATAATGAGCACATTGTGAGCTTAATCGCTCAAAATAGGACTGTGATATTACCAAT AATATTTGAGGCGTTTGAGAAAAACATCGAGTCTCATTGGCACCAAGCAGTTCACGGGCTGACTGTGAATGTTCGTAAAA TGTTCATGGAAATGGATGCGGAATTGTTTGAAGAGTGCCAGAGGCAGCATGAAGAGAAACAGGCTAAAGCCAAAGAAATG GCTGAGCAGCGGGAACTGAATTGGAAGAGACTGGCAGAAGCTGCTGCACAGAACGGGGTGGAGGATATGGTTACAGATTA G
Protein sequence (LotjaGi5g1v0084100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPVPAFRDVPVSDRQTLFLKKLHICCYVLDFSDTLKNVREKEIKRQALMELVDFIQSGSGKISENCQEEMIRMISVNIF RCFPPLSHENTGQEPTDPEEEEMCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYL KTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVAM YHQQLSYCITQFVEKDFKLADTVIRGLLKYWPLTNCQKEVLFLGELEEVLEATQPAEFQRCMVQLFRQIARCLNSSHFQV AERALFLWNNEHIVSLIAQNRTVILPIIFEAFEKNIESHWHQAVHGLTVNVRKMFMEMDAELFEECQRQHEEKQAKAKEM AEQRELNWKRLAEAAAQNGVEDMVTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 421 | 421 | 1.6E-277 | – | |
| PIRSF | 1 | 426 | 426 | 3.2E-237 | ||
| PANTHER | 1 | 421 | 421 | 1.6E-277 | ||
| Pfam | 5 | 415 | 411 | 1.3E-190 | ||
| Gene3D | 11 | 414 | 404 | 2.3E-189 | ||
| SUPERFAMILY | 16 | 397 | 382 | 6.58E-159 | ||
| Coils | 383 | 403 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi5g1v0084100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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