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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0100200 |
| Transcript ID | LotjaGi5g1v0100200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | HVA22-like protein; TAIR: AT2G36020.1 HVA22-like protein J; Swiss-Prot: sp|Q8GXE9|HA22J_ARATH HVA22-like protein j; TrEMBL-Plants: tr|K7LHZ7|K7LHZ7_SOYBN HVA22-like protein; Found in the gene: LotjaGi5g1v0100200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:18076005..18080287) extracted from Lotus japonicus Gifu genome v1.2.
AACAACAAGCATGAAACAACAAAAGAACGGTGTCGTTCCACTACACCCAACCACCAAACGGTGATTCCATTTCCAAAGAA CACCACCAACAAACCCCGACGGTTGCGTCCTCCCATTTTCTATTTAAAAAAAGAAAAATATTTCTCTGGTCATGCACACG TTTAAAAATAACTGTACCTCTGCATTACTATTTAAGTTTTTGAACCATTTTTTTGTTGCCTCTTGTGTAAGGCTTCTTCT TCACTTTCACATTTTGTTCCATAGAGAGAGAGAATCAGAGGCCATTCTTCTAGGGGATTAAACTTCATTACCTTCTAAAG TATAATAAATTAAAAAAAAAATTCTTAAGAATTATAATATTCCTTTGGAACTAGGTTCGTGGCAGGCACCCCACAATTCA CAAACCTGAGGTTTGAATTTTGGGTGGTGCTTCCTCTGAATTTGTCAAATTCAGAAATCAGAATCTAGTTCCAACTCCAT ATTGATCGTTGCAATACAACAATAACAGGTGATGATGCTAATTTATTGAAGTGCAAAATGCCATCAACAAAATGTTCCTT TGAGTTTTATTGATTGGCTGCTTTGGTTTTTTCAGAGTTTCTGGCGGTGCAACTATTAGCGGTTGAAAATGTTGGGGGAT TTCATTAATCGGTGCCTCATGTATGTGTTTTTTCTTTCTTTCTTTCTTGTTATTTTTTTTTTGTTTTGATTCATTCAATC ATTGTGTCATGTTTATGTTACATTCTTCATTGATTTTGGATTGCAGACTTCTTCTGGGGTATGCGTACCCTGGATTCGAA TGCTATAAAACAGTGGAGAAAAATAGGGTGGATATAGAAGAGCTTCGATTCTGGTGCAAATACTGGTACATTAAATACAC CATTTCCATTTTTGCTATGAACTTCTTCTGAAATGGTCAATTTTTGTTTTAATTTGTTGCAAGTTTTACAATATGCATGC AAGGCATAGTGGTGGTCAGGGACGGATGTATGTACAAAGTTTATGAGGGCAAATGCCCTCACTTGATTTTTTTAAATATT ATTAGAAAAAAAATTGAGTAGTAAAAGTATGTGATTTTTTATGTCTTTTTTGGTACTCATTTGTGTTTCATATTGCAAAA TGCCCTCACTTGTATTCCACATTGTTAAATGTTCTCACTCGAGTAGTAAAAGTATATGGTTTTATATGATCTCTTTGGTA AAAAAATGTCATCACTTGTGTCCCATTTGGTAAAAAATGCACTCACTTATAATAGTATATATTAAATTTTTTATATAAAT TTATATGTATATATTGCCCTCACAACATCAAATTTCTGGATCCGTCACTGGTGGTGGTGCATGGTGGCACTAGTTATTTG TAAGTTTTAGGATAATGACAGGATTAGTTATGATCTAGATAAATTTTAAGGCGATTTCTATACACCGGAACTAGAATTCT ATTGGACATACATACATGAGTAAAGAATTAAAAAATAGTCCTTGAATTTGTTGACAAGAAAAGGATCCTCTTATTGAATA ACCAAATGAAAGCTAATACCTATAAAATCAGAGCAAAACAGAGCCCTTGTAGCATGTTTGGTAGCATGTTTAGAGTTAGA AGGTTTTCCCAGCATGCATTTAATGCCTCTTTGGAACTCTAGTATGTTTTTCAGGAGACAATTGACTTTAGAGAAGTTAC CAAGAGTAGCTTTTGTAATGTAGGAAGTGATTCTGGAGGGTTTTAATGTGGATCCATAGATTTTCTTTTAGTTTTTGTTT GGTTGAGTTGTAGTCATAAAAGCCAATTCACTTCCATCCAAAAACAACAATTCGCGGCTTAAATGCGGATCAAAGACTAC TTATTAGAGCTTATCCAGTATTTTTTTTTAGTAGATTCACTTCAAAAGTGGTGTTATCCTTCGATTGACTTGAATGCAAT TTAATGTGATTCTAATCTTAACGAAGAACTTTTAAATGAAATAACCCACAATCAGAAGCTAAACGTGTCCTTTTCCTAGG TGTAGACATGGTGTTAAGCACCACTAAAAGTAGAGTGAAAAGAAATGATGACTAGAAAAGGATATTGTTTTGTTCCAGTT GATTTTGGTTATGCTTGTATATTTTTACCCTATTAAACTATGAGTTGAATTCTCATATAGCTTTGTCACTGAATCACATC TTTTGCATTATGTATTTGAAGGATCATTGTGGCCCTCTTCACAGTACTGGAAAAGTTTGCAGATATCTTTCTTGCATGGT AAGACTCATTTGTCTATGTTGTGTTGTTTCCTTTTGATTTAGCTTCATGCAAAAATTCGCCCTTCAACTCTTTTTGAAGG ATTCCAATGTACGGAGAGACGAAACTGATTCTCTTTGTCTACATGTGGTATCCCAAAACAAAGGTAAGATCTTAACTTCT TTACAATTTAAGTTTCAGTGAATAGCTTCTAGATTTCAGAATTGATTCTAAAAGAAAGAAAAATTGATCCAAACATGCAG GGTACGGGATATATTTATGAGACCGTGTTGCGGCCCTGCATATCAAGGCACGAAAATGAGATTGACAGGAAATTGCTAGA GTGGAGGGCAAGGGCATGGGACTATGTGATATTTTACTGGCAATATTGCGCGCAATTCGGGCATTCTGCATTTCTCATGG CGCTTCAGCAATTAGCTACTCAATCTACAAAAATTATTCCTACCCCAGCAGCAACTCAGAAAAACGTGAACGATGCACAG GTCCAAACCGCTGCAGCAGAAATGACTGTAAAACAAGCATCTTTCCAGATGAAGCAAAACAGCACCTTGAGCAAGAGCAA GAAGTGGCCGCCAAGTCCCCCAACATCACCGACCGCCACCACAAATACAATTCACCGCAGCAGCAGCACCATCTCAGAGA CTCCTCGAAAGTCTAAAACCATGCACCAGGTTCCGGTCGATCATTCCTCTTCGGAAGAGTATTTAGAAGAGGAAGAGGCA TTGATGGACCCTGAACCTGTTACATTAGATCAGGAAGTAAAAGATGATGAGCAGCGCGTGGGTGTGAGCGTGAGGGACAG GATCAACCGCGCTCGCGCGAGGCTAAGGAGGTTAGATTCCTCACAAACCCCCAAAACACCGCGAACACCACAAAAACGAC AGCAGTAACAGCAACATTTGTACATAGTGTCACCTTAATTATCCCCTTGGAGAAAAATGGTGAAAAATGAAATTAGACTC TGCTTTCTTTTTCTTTCTTATTCTAAAAGTTGTTGTTCATTTATATATGTACACTTTTATTCTAGTAACACGCTTTGCGA ATTTGCAAAGTTGAGTTCAAGTTGAGAGTTTTTTTTTTTTTAAAAAAAAATCAATTGGTTGATAATCTGAGAGCAAAGAA AATAAAGAAATATGCTATTCTTTTACTACGCACGGAAGCAAAGGATTGCTACCTGGTCCCTGATTGCTTGAAGAGTTGGG TGCAAAGTTCGGGTGAAACAAGAAAGGAACTATGACGCCAGATGAAGCTGAGACATAGTCATGACTCATGACACTAATCT CTCCCATCGCTATCAGTGCAACTGAGTGGTAGAGACGGACTAATTAGTTTTTTTTTTAATTCACAAGAGTTGAAATTCGA GCATCCAACCGCTTTTGTAAGAACTGATGAAGTATTAGACTACCGTGTTTTATGTCTTTATCACTATGTCAACCCATTTA GTTAGGCAATGGTCGAGATAGTGCAGCGGTTATGGCTGACAAGAACCTGAGAAGGAGAATGTTATTAACGTTTTTTGGTT CTTAGCTAAGTGCAACACTTGATTTTGTAATTACTACAATTAAGGCACAAGTATGATGAAGTTGGGCCATGTGCTGCACA CAAGCCCAAGAGGATCACTAACAAGCGGGCATGGTTAAAGGATTTTATCTTTTTTAATATATCGGAAAGATAAATTGCAC TTTTTAGGAATTGATCCCTGAACCTCCTCCTCCCAACCCGTATGGCGCCGGTGTGAGGGACAACAAATTGAGAGGTACTG GTTCTTATTTGGACAACAAATTGTGAAAGTAATAGACATGATTTAGTTTAGAGTCTGGTTGTGGCTCAAGGTGAAGGGAA AGAATTGTATGGCTTCCATTTATGAATGGATCGAGAACCCTGTTGCTTGCTTGAGCTCCGTATCTGTCAGATAGTTTGCA AGTCTCAGTTTGCCAGCATTGGAGCAATTGGACTAGTTTGTTGGTTATCCATGTGCTTGTGTGTAAGGTGCATCTTATGG TGACGTTTTGGATGATATATACTGCTGGGTTTATTTAAGAAGG
CDS sequence (LotjaGi5g1v0100200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGGGGATTTCATTAATCGGTGCCTCATACTTCTTCTGGGGTATGCGTACCCTGGATTCGAATGCTATAAAACAGT GGAGAAAAATAGGGTGGATATAGAAGAGCTTCGATTCTGGTGCAAATACTGGATCATTGTGGCCCTCTTCACAGTACTGG AAAAGTTTGCAGATATCTTTCTTGCATGGATTCCAATGTACGGAGAGACGAAACTGATTCTCTTTGTCTACATGTGGTAT CCCAAAACAAAGGGTACGGGATATATTTATGAGACCGTGTTGCGGCCCTGCATATCAAGGCACGAAAATGAGATTGACAG GAAATTGCTAGAGTGGAGGGCAAGGGCATGGGACTATGTGATATTTTACTGGCAATATTGCGCGCAATTCGGGCATTCTG CATTTCTCATGGCGCTTCAGCAATTAGCTACTCAATCTACAAAAATTATTCCTACCCCAGCAGCAACTCAGAAAAACGTG AACGATGCACAGGTCCAAACCGCTGCAGCAGAAATGACTGTAAAACAAGCATCTTTCCAGATGAAGCAAAACAGCACCTT GAGCAAGAGCAAGAAGTGGCCGCCAAGTCCCCCAACATCACCGACCGCCACCACAAATACAATTCACCGCAGCAGCAGCA CCATCTCAGAGACTCCTCGAAAGTCTAAAACCATGCACCAGGTTCCGGTCGATCATTCCTCTTCGGAAGAGTATTTAGAA GAGGAAGAGGCATTGATGGACCCTGAACCTGTTACATTAGATCAGGAAGTAAAAGATGATGAGCAGCGCGTGGGTGTGAG CGTGAGGGACAGGATCAACCGCGCTCGCGCGAGGCTAAGGAGGTTAGATTCCTCACAAACCCCCAAAACACCGCGAACAC CACAAAAACGACAGCAGTAA
Protein sequence (LotjaGi5g1v0100200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGDFINRCLILLLGYAYPGFECYKTVEKNRVDIEELRFWCKYWIIVALFTVLEKFADIFLAWIPMYGETKLILFVYMWY PKTKGTGYIYETVLRPCISRHENEIDRKLLEWRARAWDYVIFYWQYCAQFGHSAFLMALQQLATQSTKIIPTPAATQKNV NDAQVQTAAAEMTVKQASFQMKQNSTLSKSKKWPPSPPTSPTATTNTIHRSSSTISETPRKSKTMHQVPVDHSSSEEYLE EEEALMDPEPVTLDQEVKDDEQRVGVSVRDRINRARARLRRLDSSQTPKTPRTPQKRQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 214 | 214 | 3.4E-126 | ||
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 1 | 214 | 214 | 3.4E-126 | – | |
| Phobius | 9 | 14 | 6 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Pfam | 19 | 97 | 79 | 4.6E-24 | ||
| Phobius | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 64 | 22 | - | – | |
| Phobius | 65 | 299 | 235 | - | – | |
| MobiDBLite | 181 | 299 | 119 | - | – | |
| PANTHER | 201 | 298 | 98 | 3.4E-126 | – | |
| PANTHER | 201 | 298 | 98 | 3.4E-126 | ||
| MobiDBLite | 202 | 231 | 30 | - | – | |
| MobiDBLite | 252 | 285 | 34 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0100200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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