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LotjaGi5g1v0108200.1

Overview

Field Value
Gene ID LotjaGi5g1v0108200
Transcript ID LotjaGi5g1v0108200.1
Lotus japonicus genome version Gifu v1.2
Description Sucrose-phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH14|SPP1_TOBAC Sucrose-phosphatase 1; TrEMBL-Plants: tr|I3SAL2|I3SAL2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0108200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:20577442..20580930) extracted from Lotus japonicus Gifu genome v1.2.

TAAAAAAGAAAAACTTTAGCAAGATAATGGATTGGAATGTTTAATTTGATCCTCTCACTACTTACTCAGGCACCGAAGAA TAAGCGGCAACGAATTTGGATCCAATTCAGCATTTTGCATCTTTTCTGTTATATTCAGAGCATATTATCACTTACTCACT TCCGTTCTTTTTCTTTTTAACCACTTTCTCTTCATCTTCTTCACAAATCACAACCACTCTTCTATTCTATTACAATTTAC AGGTTTCATCATCATCTTCTCTCTACTATCATCACTCACTCCTCAAATTCCCTTCTTAATTTTCATCTCCATTCCCCTAA TTTCATTTTTTTTTTATATTTGCTTGCAGATTTTTGTTTTTTTTGTTTTTATCTTTGAAATGATGGTTTAATTAGTGTTT TTGAATATGGAAAGTGTTTTCTGTCTGAATCAATCGAATATCGTGCTTTCCTTTTTTATATGAACCCGATTTTGTAGTTG AATGTATGATTTTTTAAGTTCTGGGGAAAAACCGTTATGCTCTAGAATGAGTTCAAGTGTTGAACTGAGTTAATGCACAG TTAGTTGTTAGTTTATAGTTTTGATTTGTATGTTAATCTGCATAAAATGCTAATATAATCTCGTCGCTTTTCTCTTTTTT TGAATTAGATTTCAGCTCACAGGATCAAATTGGGGATTGAACATCATGGATCGACTTCAATCTTCTGCACGGCTTATGAT TGTATCGGATCTCGATCACACGATGGTGTGTTTTCGCAGTTGCCCGTCTTCTTTTATCTGATTCTGATGATGTTATTAAT TGTTATTATTATTATTATTATTGTTGTTGTTGTTGTTGATGTTGTTGTTATAATTCTTATTGTTATTAATTTTATTGTTG TAGTTGTTGTTATTGTTGTTGATTGTGATTTAAATGGTTGATATGATTTGTTGCAGGTGGATCATCATGATGAGGAGAAT AGCTCCCTTCTCAGGTTCAATGCTCTTTGGGAAGCGCATTACCGCCATGATTCGCTGCTGGTGTTCTCAACCGGGAGATC ACCTACTCTCTACAAACAACTGAGGAAAGAGAAGCCGATGATAACTCCTGATATAACCATAATGTCTGTGGGGACCGAGA TTACTTATGGAAAATCAATGGTTCCGGATGATGGATGGGTTCAGGTTTTGAACCAGAAATGGGACAAGGACATAGTTATT GAGGAAACAAGCAAGTTTCCTGAACTTACTCGTCAGGTACTATTTGTATGTAGGTAATAATGTGGTTTGTTTGTTGATTT TTTAACGGTTCAAGCACAATGGGCATTTAGGGTGACTTATGTGATTCTTTCACAATTATTTAGAGGTAGCAAATTAGCAA TAGCATCTTAGACTGCTTTGATTCATATCTTATTAACTGGTAGTGCAGGCAGAAACAGAGCAAAGGCCACATAAAGTTAG CTTTTATGTCAAGAAAGATAAAGCTCAGCAAGTGACAGAGTCTCTTTCTAAGATTTTGGAAGAGCGTGGGGTAAGCTACA ATGCCTTTATATTCATTTCTTTCCTCATCATTTATTTTGTATGTATTATGAATATGTGAGTTAGATTTTCTGACATCTAA CTTTACATGTTTAATATTGTATATAATTCTGTAACATTACCTCTTTTCTGGGCAGTTGGATGTTAAGATAATATACAGTG GAGGAGTTGATTTGGATATATTACCAAAAGGTGCTGGAAAAGGTCAAGCTCTTGCGTATCTGCACAAAAAATTTGTCACT GAAGGAAAGCTACCTGTTAATACTCTTGTTTGTGGTGACTCTGGAAATGATGCCGAGCTATTCAGCATTCCAGGAGTTTA TGGTGTCATGGTTGGTGGCTTAACTTTTTCATCAGCATATTTTGCCGTTGACTAAAATTAAGATTCTCTTGCTTTCTGCA TCTTCTTCTGTTCATTGTGTAGGTAAGCAATGCCCAAGAAGAACTGTTACAGTGGTATGCCGAAAATGCAAAAGATAACC CCAAGATTCTTCATGCCTCAGAGCGTTGTGCATCAGGGATTATCCAAGCCATTGGTCATTTTAACTTAGGTCCAAACCAG TCCCCAAGAGATTCTCCTGACGATGAACAAGAACCTGATTTTGAAAATGTCTCTCCAAGTCATGAAATAGTGAACTTTGT TTTATTAAGTGAAAAGTGGAGGCGGGCAGAAGTTGAGAACTCAGAGATGTTTATTGCTGCTTTAAAGGCCGTCACCGTAT GACCTTCCCACCATAACTTTCAGTTTTCCTCTCTCATTTTCTTGTTTCTTGATCTGAGCGCTCTATTATTGCTTTGATGC ACATGGACATCGGATTTTTCTTTTTCGAGTCTTACAGTAAGAGTTTACATTTGGAGAAGTGTCTGAGTTGTTCTATCTTT TAATGTGCAGCTCCCTTCTGGTTTTTATATCCACCCCTCTGGTACTGAGCATAATCTAAAGGAGTATGTAAATATTTTGA GAAAGGTGCATGGTAACAAACAGGGAACACAGTTCAGGATTTGGGTGGACAGTGTATTGGCTGAGCAGGTTGGTTCAGAT ACATGGCTAGTGAAGTTTGATAAGTGGGAGTCATCTGGTATGAGTTTCCCTTGCTTTTTGTTCTTTATGGTCATTTCATT TCTTTTTCCTTTGTATCTCTCAAAATAAATAATTCGGTATCTTATTTTTTATGTTGGGAAAATTGCGGTTAGGGCATCTG CAAGGAAATTAGAAAATTTTGCATTGCGCCTGCGCGTCTTTACCTATAACTACTGAATTTGTCAATTTTCAGGTGAAGAG AGGCAAGGTTGTGTGGTCACTGCCATACTGAGAAAGGTGCGTTGTAATGCATTAAGTGTTTTTTCCATGTGTTTCCTTTA ACTTTTGCTGAGGAGTGAAATTTGAATTTCAGGATTCCAACTGGTATACCTGGATGCATGTGCACCAGACATGGCTGGAA CAATCAGGGCATGGTGAATGGATAATTTAGCCATATTCTATGGCTTTTCCAAGTTCCTCAGTGTCTTGTGACCCCTTTTG CAATAAATGTAATGTAATCCATGACAAACTGATTTCAGCATTTGAATTTTTTAAAGAACTTCCATCATGTGAAGGTGTCT TATATTTATAGATTTGAACTTCACTGTAAATCTCCTTGTTGCATAGCTTTCTGAAGAATCAAATTTTAACATCTCAGACT GATGGTGGATCATTCCAAAGCTATGTTATGTTCAGCTTTTATTGTTTTGCATAATAAATCGATTGAGAAAAAAAATTCAG AATATTTTTGTTTCCAATTGAGCTAGAAAAACTGTTTTGTAAAATTATAGCTTATGGAAAACCACTTAGAAGTTGCAGGT GCCAGGTAGTATATCCTAGCTTCTACTTTCTTGACACAACTGCAAACGTGTTCCATAAAGCTTAATACTTTAAAATCTTG CACAAAATCTTGTATTCAAGTGAACAGCCTCTCAGAAATTACGTTTCCT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0108200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCGACTTCAATCTTCTGCACGGCTTATGATTGTATCGGATCTCGATCACACGATGGTGGATCATCATGATGAGGA GAATAGCTCCCTTCTCAGGTTCAATGCTCTTTGGGAAGCGCATTACCGCCATGATTCGCTGCTGGTGTTCTCAACCGGGA GATCACCTACTCTCTACAAACAACTGAGGAAAGAGAAGCCGATGATAACTCCTGATATAACCATAATGTCTGTGGGGACC GAGATTACTTATGGAAAATCAATGGTTCCGGATGATGGATGGGTTCAGGTTTTGAACCAGAAATGGGACAAGGACATAGT TATTGAGGAAACAAGCAAGTTTCCTGAACTTACTCGTCAGGCAGAAACAGAGCAAAGGCCACATAAAGTTAGCTTTTATG TCAAGAAAGATAAAGCTCAGCAAGTGACAGAGTCTCTTTCTAAGATTTTGGAAGAGCGTGGGTTGGATGTTAAGATAATA TACAGTGGAGGAGTTGATTTGGATATATTACCAAAAGGTGCTGGAAAAGGTCAAGCTCTTGCGTATCTGCACAAAAAATT TGTCACTGAAGGAAAGCTACCTGTTAATACTCTTGTTTGTGGTGACTCTGGAAATGATGCCGAGCTATTCAGCATTCCAG GAGTTTATGGTGTCATGGTAAGCAATGCCCAAGAAGAACTGTTACAGTGGTATGCCGAAAATGCAAAAGATAACCCCAAG ATTCTTCATGCCTCAGAGCGTTGTGCATCAGGGATTATCCAAGCCATTGGTCATTTTAACTTAGGTCCAAACCAGTCCCC AAGAGATTCTCCTGACGATGAACAAGAACCTGATTTTGAAAATGTCTCTCCAAGTCATGAAATAGTGAACTTTGTTTTAT TAAGTGAAAAGTGGAGGCGGGCAGAAGTTGAGAACTCAGAGATGTTTATTGCTGCTTTAAAGGCCGTCACCCTCCCTTCT GGTTTTTATATCCACCCCTCTGGTACTGAGCATAATCTAAAGGAGTATGTAAATATTTTGAGAAAGGTGCATGGTAACAA ACAGGGAACACAGTTCAGGATTTGGGTGGACAGTGTATTGGCTGAGCAGGTTGGTTCAGATACATGGCTAGTGAAGTTTG ATAAGTGGGAGTCATCTGGTGAAGAGAGGCAAGGTTGTGTGGTCACTGCCATACTGAGAAAGGATTCCAACTGGTATACC TGGATGCATGTGCACCAGACATGGCTGGAACAATCAGGGCATGGTGAATGGATAATTTAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0108200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDRLQSSARLMIVSDLDHTMVDHHDEENSSLLRFNALWEAHYRHDSLLVFSTGRSPTLYKQLRKEKPMITPDITIMSVGT EITYGKSMVPDDGWVQVLNQKWDKDIVIEETSKFPELTRQAETEQRPHKVSFYVKKDKAQQVTESLSKILEERGLDVKII YSGGVDLDILPKGAGKGQALAYLHKKFVTEGKLPVNTLVCGDSGNDAELFSIPGVYGVMVSNAQEELLQWYAENAKDNPK ILHASERCASGIIQAIGHFNLGPNQSPRDSPDDEQEPDFENVSPSHEIVNFVLLSEKWRRAEVENSEMFIAALKAVTLPS GFYIHPSGTEHNLKEYVNILRKVHGNKQGTQFRIWVDSVLAEQVGSDTWLVKFDKWESSGEERQGCVVTAILRKDSNWYT WMHVHQTWLEQSGHGEWII
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46521:SF9
1 412 412 1.4E-212 –
SFLD
SFLDS00003
1 262 262 0.0 –
SFLD
SFLDF00043
1 262 262 0.0 –
PANTHER
PTHR46521
1 412 412 1.4E-212 –
TIGRFAM
TIGR01485
9 262 254 5.3E-119
IPR012847
Pfam
PF05116
9 261 253 1.2E-102
IPR006380
Gene3D
G3DSA:3.40.50.1000
11 258 248 1.2E-81
IPR023214
TIGRFAM
TIGR01484
11 219 209 2.2E-35
IPR006379
SUPERFAMILY
SSF56784
11 230 220 3.58E-28
IPR036412
CDD
cd02605
11 259 249 2.72215E-97 –
TIGRFAM
TIGR01482
12 257 246 2.7E-72 –
Gene3D
G3DSA:3.90.1070.10
102 172 71 1.2E-81 –
Pfam
PF08472
262 393 132 1.1E-51
IPR013679
Gene3D
G3DSA:3.10.450.50
280 410 131 3.6E-9 –
SUPERFAMILY
SSF54427
284 409 126 1.67E-24
IPR032710

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0005986
Biological process Sucrose biosynthetic process The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.
Subterm of
GO:0050307
Molecular function Sucrose-phosphate phosphatase activity Catalysis of the reaction: sucrose 6F-phosphate + H2O = sucrose + phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0108200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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