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LotjaGi5g1v0112000.1

Overview

Field Value
Gene ID LotjaGi5g1v0112000
Transcript ID LotjaGi5g1v0112000.1
Lotus japonicus genome version Gifu v1.2
Description Protein-lysine N-methyltransferase; TAIR: AT3G58470.1 nucleic acid binding / methyltransferase; Swiss-Prot: sp|Q9CY45|N6MT2_MOUSE Protein-lysine N-methyltransferase N6amt2; TrEMBL-Plants: tr|A0A0R0IGD8|A0A0R0IGD8_SOYBN Protein-lysine N-methyltransferase GLYMA_09G103300; Found in the gene: LotjaGi5g1v0112000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:22173050..22176826) extracted from Lotus japonicus Gifu genome v1.2.

TATATCGGTTTGGTTCATGTTCAATGAGTTGAACGGCCCAGCCTTAGAATCTAAGATCCGGTTGGAGCACCCGGTCCACT CAACGTTCCTTCCTCCTATCACTCTGTGCTGGTTGCATCTCACACTCTCCAGTCTCCACACAACAACATGGAGGAGCAAC TCGAACTGAACCCTAACTCGGTCACCGGACTCACTGAGTCCTCCGCGCCGTCCTACGAAGAAGACATTGACGAGGACGCT CCAGTTCTGAGCTCCCATGCTCTCGCCGCCCTCAAAGAGTTCCTCGCCGAGCAGCAGCCGAGCCACTCTGACGCCGGAGA CTCCGAAGTTGCTCTGGTGTCCGAGGATTGGAGGTTGAGCCAGTTCTGGTACGACGCTGAAACCGCAAAGACCGTCGCTG AAGAGGTGCTCGGGCTCTGCGGCGGCGGTGTCGATTCTCGCGTCGCCTGCATCGCTTGCCCTACACTCTATGCCTATCTC AAGGTAGTTTCTGATTTCTGATTTCTATTCTGCAACTGTTTCTGGTTGAATTGAAGTTTGTTTATATTCACACTTTATGG TTCAAGTGAGAATGATTGGTGTCAGGATTTTGAATAGTAATGTGCATAGTTAATGTGTTTGATCAATGGTTCAAATTGTT GAGTTCAAAAAAATGGTTCAAATTGTTAGTGCTTTGATGTGTTTGGAGTTTGGTACCATTCAAAATTGTGATTTGAAATT CACCATTGGAGAGAGTCATTTCATTTATCTAAGCTGCTTAATAGGAGAGATAGTGTCTTTAGAATTTAGAGCTTGGATTT TGTTTGTTTGTTTAAACCACAACCTGCTTGAGCCGGGTAGGAGCACTATGGGTTGTAAAGCTCGCCTTATTAAATATTTA ACGCAGCTGCACTCACATAGACTTGAACGACAAGCTAGACAGTAGACACCGGTTGATCTACTTGCTTGGTGATCCTTAGA GCTTGGATTAAACTTCCAGTTTGATATTTTATAATTTATTTGTAATATAAGACTAGAGTTTAGAACATTTACTTGATCTA GAACATGTTTACAATGTCAAAGCCTAATGACTGAAAATTGAAAAAGTTAATAAGGCCACATTTGTAGCTGTAACTAATTG TATCATGAAGTGGTGTATTGACACTTACTGCTCAATATTTTGATTCCTTTGAGTGTCCATTTTTTTTTGGCTTTCTTAGT TACATTCTGTTTTTCAATTCTTCAATTTTCAGAAAATGGATCCTAGTGTTTCTATGCAACTTCTTGAGTATGACAAACGT TTTGAGCAATATGGAAGTGATTACACATTTTATGACTACAATCATCCTGAGGAGTTACCATCAGAATTGAAGCACTCTTT CAGAGTTGTAGTTGCAGATCCTCCTTATTTGGTGAGAATAACTTTAGCTGCATTAAATTGGTACCATGACCATCTTTGTC TTTTACTTCCACTTCTGTCAATTGTTTATATACTTCAGAGAACTATGAATGATTTTAGCGATGGGGGATTAGTTGATTTT CACGTGTTTTCTTTTGATAATTGTTTTTGCGCTCCTAGTGTGCAAGTCGTAGTAGTTTGAATCTTATAACTCCATTCACT ATTTAAAACTCAGATGCCATCATTTGTCAAGTCAGCACAGGTATAAAGGGAATATTTTTATTATTAGGTGTGTCAGATAG GATCACTCTTTTCCTCTTCTAATCTCAAGAGTGTTGTAGATTCTAAGTCTTCTAAGATTTGTGCATGACAAATCTATTGT GTTGAATTGAACTTCTCTCAAGTTTAATTCTTCCCTCCCTCGGGTAAATTTTCACTTTTTCTAATTAAAAGTAACGGCAA TTCTTTGATATGAAGCTCATATTGTAAGGCTTTTAGGTATGATTGTAATCACTAATCAATGTGAAGCTGATTTTTTGTTT TGCTTCATACATAATGACCTCGTGTTAGACAAAGCAAAGGTGCAAAGGCTTTATAGTTTATATCCTCCTTTACATCTCTT TTTTTTGGAGTTGAACTGGATTTGCCATGGACCCTTACTCCTTAGGCTTCCTTTATGTCAATTTGTGCTATTTTAAAGTT TTTTTTTGTGTCAGCTTCTAGCATAGGCACCTGCTTGCTCTTGTAGTGAGACTGAGTTCTATCTTAGTGACGCCATTGTA AGAATATTGCAGTTATTTGTTACCACAAAAGGTGCTCAGGATGCGAGTGCAAAAGAAAAACCCAGTTTTATTTAAGGCAT GACGTGACAAACCTTTTCTTTCCCTCTTCAATAAAAGGAAAATTAGTCTTGAACTTTTTTTTTTGACGGTCAAGTAGTTT TGAACTTTAATATATTACAAATTTAACGTTAAAAGAAAAGTTCCAATAAGTTAGTAGTGACTAGTGAGTGTAGATGGCAA GCCTTTGTAATTTAATTTGCAATGATAATTTTGTCCATTTTAAGAGAAGACATAATACACCGGGTGGGTGACATTTCTAT GAGTGATAATATTGATTATTTTCAGTTTAGAAAATGATGATCTAATTAAGCAAATTTCTTTGGAAACAGAGCAAAGAGTG CTTGGAGAAAGTTGCTGAAACTATTTGTTTTCTCACACAACCTGGAGAGTCATTTTTGCTTCTACTCACCGGTAAGGATG AATTTTATCCTGTTTTGTGTTGTATTACTACCCTGAAAATGATAATTTCCTCTTAATAGAATGTTCATGATGAGGTCATC AGTTTAAAGCCATTTGCCAAGGTTAAATTCCCTAATTGTTGTATTACTATTAATTGCAGGTGAAGTGCAGAAAGAAAGGG CCGCTGAGATCTTGGGTTTGCATCCGTGTGGTTTTAGGCCTCATCATTCCAGCAAACTTGGAAATGAATTTCGTTTGTTC ACAAACTATGACCCCGGAACGAGACTAGGAGGGTGGGAAAAATAGGTATTTTCGTTTGGTTGCCTTTGTTGTAATTTGAT ATCAGTGAAGAGTTGAATTTATTTCGCCCAACAACTGCTATCACACCAGATTCCATCTTTAGGCATCTTATATGTATGGA ATGTGCATAACTAGGTATATAGACGGAAGCTGGTTTATCACCTAGTTGTCTGAAGCTGCAGTTGCAGATTTGGTGGCAGG GTGATTCGACGATCTTGGATACCACCATTGAAGCTATTCAACTTGAATTATTGATCAAATACGAACATTTTTGTGGTATG ACTATTAGCTTCGGGGACCATGAGCATGATTTTTTACTTTTGTTCCAATTCCCATTAAGAGGCCTATTTAGATTTTAAAG AGTTGTAGTGTGTTTGGATCTATGTTGAACTCGACGTGGTAAAATCTTGTTCCTCTGATCCATGTAAGTTCAATATGACA GACTCCAGTGCTAAGGGAAATTCCAATATGGGATCTATCCGTGTGGTCTAGTCTACCCATGTATTTTTCTTTAACAGGAT CATCTTTATATACAAAACATGATCTATTTGTCAGTGTTCTTAATTAACTCTTTCACAAGACAATATCGCCCGTGCTTGCA ATGTAGTGCTTGCTCAGCAAGATGGAATCAGGAATGCTTATCATCCCATCCTCCATCCAATTATATATACAGTTGATTTT TTTGGTCCAGATACAGACAGTTGACTTTAAATAAATAAACGCAAGAATAATTATTTAATCTAAATTTCCTTATTAGCGAG TCCTTCCTGATATAAAGGTCTGTGAATGAAATCGTGTTTAACTGACATTGATATGAGACCCTTTATAGTTTTATATCGAA ATAATTTCTAATTCAGC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0112000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGGAGCAACTCGAACTGAACCCTAACTCGGTCACCGGACTCACTGAGTCCTCCGCGCCGTCCTACGAAGAAGACAT TGACGAGGACGCTCCAGTTCTGAGCTCCCATGCTCTCGCCGCCCTCAAAGAGTTCCTCGCCGAGCAGCAGCCGAGCCACT CTGACGCCGGAGACTCCGAAGTTGCTCTGGTGTCCGAGGATTGGAGGTTGAGCCAGTTCTGGTACGACGCTGAAACCGCA AAGACCGTCGCTGAAGAGGTGCTCGGGCTCTGCGGCGGCGGTGTCGATTCTCGCGTCGCCTGCATCGCTTGCCCTACACT CTATGCCTATCTCAAGAAAATGGATCCTAGTGTTTCTATGCAACTTCTTGAGTATGACAAACGTTTTGAGCAATATGGAA GTGATTACACATTTTATGACTACAATCATCCTGAGGAGTTACCATCAGAATTGAAGCACTCTTTCAGAGTTGTAGTTGCA GATCCTCCTTATTTGAGCAAAGAGTGCTTGGAGAAAGTTGCTGAAACTATTTGTTTTCTCACACAACCTGGAGAGTCATT TTTGCTTCTACTCACCGGTGAAGTGCAGAAAGAAAGGGCCGCTGAGATCTTGGGTTTGCATCCGTGTGGTTTTAGGCCTC ATCATTCCAGCAAACTTGGAAATGAATTTCGTTTGTTCACAAACTATGACCCCGGAACGAGACTAGGAGGGTGGGAAAAA TAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0112000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEEQLELNPNSVTGLTESSAPSYEEDIDEDAPVLSSHALAALKEFLAEQQPSHSDAGDSEVALVSEDWRLSQFWYDAETA KTVAEEVLGLCGGGVDSRVACIACPTLYAYLKKMDPSVSMQLLEYDKRFEQYGSDYTFYDYNHPEELPSELKHSFRVVVA DPPYLSKECLEKVAETICFLTQPGESFLLLLTGEVQKERAAEILGLHPCGFRPHHSSKLGNEFRLFTNYDPGTRLGGWEK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 28 28 - –
MobiDBLite
mobidb-lite
1 20 20 - –
PANTHER
PTHR13200:SF0
18 240 223 1.8E-109 –
PANTHER
PTHR13200
18 240 223 1.8E-109
IPR019369
Hamap
MF_03187
26 235 210 36.292
IPR019369
Pfam
PF10237
66 230 165 4.9E-50
IPR041370
Gene3D
G3DSA:3.40.50.150
118 209 92 5.3E-6 –
ProSitePatterns
PS00092
158 164 7 -
IPR002052

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of
GO:0016279
Molecular function Protein-lysine N-methyltransferase activity Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate.
Subterm of
GO:0032259
Biological process Methylation The process in which a methyl group is covalently attached to a molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0112000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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