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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0152000 |
| Transcript ID | LotjaGi5g1v0152000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT2G04540.1 Beta-ketoacyl synthase; Swiss-Prot: sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase, mitochondrial; TrEMBL-Plants: tr|A0A072VM15|A0A072VM15_MEDTR 3-oxoacyl-(Acyl carrier) synthase II; Found in the gene: LotjaGi5g1v0152000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:39747306..39752638) extracted from Lotus japonicus Gifu genome v1.2.
GGTAGATAGGTTTGTGAACATTACCATCAAATACCAACAACTAAGTGGGGTTGGACATGGGCATGGCGGTGCGTGCAGCT TCACGCAGAGCTTTCATCTCCTTCTATCGAACCGTTTCTTCAACTGCATCTTCAGGTGGAGCTCTTCCACCTCCTCCGGT TGTTTCTTCCCGAAGAGTAGTTGTCACCGGTAACTCTCCTTCTCTCCTCCACCTACACAATCTCTCTTTCACAGTTTCAT TCATTTCGTGGTCTTTTTCTAGGTTTGGGCATGGTGACACCTCTTGGTTGTGGGGTGGATAAAACTTGGAAGCACCTGAT TGGTGGGGAATGTGGGGTAAGGGCATTGTGTTTGGAGGATCTCAAGATGAATGGTTTTGATAGAGAAACCCAGTTGAGTA CATTTGAGCAGTTGACATCCAAAGTTGCTGCGGTTGTGCCCACAGGAACGAACCCGGGTGAATTCAATGAGGAATTGTGG CTTAATTCTAAGGTGAGCTTTTATTTGCTACACTGGAAGGTGTGCATAAGGTCTCTAGTTAGGTATGGAATTTCTCTGTT TTCAAATTAAGCATTCTCGCAATACACCTATAAAGGTTAAGCATGTAAGTGAAATATAATTATAAATTGTCAATAGCTCC TTAAGGATATGATGCATAAATGTCATAAGACCTCAAAAGAAAATATGAAGTATTGTATTATTGCAAACCTGAAGCCATAG CCTGTGCTGGAGTTCTAACATAAATTTGTGCATTGGAAACAGGACTTTGAACATTTTTATGCACACAGGCAAAGGATTTT GTCCATGAAAAATGAAACTATATTTAGTTATTTACAGTTCAGTGTCTGATTGTATTTCCTCACAGCCACTCAGTATGTTG CAGATAATTATGCTTGATATCTATGGCCTCTTAAACTGAGTCTGAAAACATTAACCACATATTTTCTGAAAATAAGAAAA AAACATTTATTTTATTTAAATTTTGTACCAAAAAGAAAGTCAAGCTGTTTTTGGATTAAATCATGGAACCCCGTGAACCT GGTGGACCTCTTGGTGGTTGACAATATTGTCTTTAAATTAGATGGAGGTTCCTATTGTTCCTAACATGAATGTAATCAAC AGGGCTGAAAGAGAGAAAACAAAAAAGAAGATAAAGTTGGCTAAGTGTTATGTAGCTTCTTCGTGTATTTAATGTTAACG GATATTGTTTTTCTTTTACTTGTACATGCTGGATCTAAACTTCTATTATGCTTATTGATGTCATTGTAGTATTGTGAAAT TTTCCTTAGGACCATCGATCCATAGCAAGGTTTATAGCGTATGCACTATGTGCTGCTGAGGAAGCTCTTAAAGATTCCAA TTGGTTTCCCACTGAGCAGGAACACAAGGAAAGAACGGTATGCAATTTTTGAATATGGTTCATACTTCATAACAAATAAT CTGACATTTCCTCTGTGACCTATTGTATTTTAACTTCAAAAACTATCAGGGGGTGTCTATTGGTGGGGGAACCGGAAGCA TTAGTGACATCTTAGATTCTGCACAACTGATATGTGAGAAGGTCAGTTTGTAGTAACTCACTGGTATTAAGAACTTGATG ATCTTTCCTCATTCAAGTTTTTCTCCATGTGCCTATAATATTTGATATTTACTTATTCTTCTCTCAATACAGCGTCTTCG TCGCCTTAGTCCATTTTTTATCCCACGGATATTGATCAATATGGCATCAGGTCACGTAAGCATTAAATATGGGTTCCAGG TAAAGAAACTACTTTCAACTAATTGATATTCTATCAAAAAGTTATAGTGAGCTTCTATAGGCTATGGCTGCTGGGAAGGC AACTGTTTTTTTTTTCAATTACTTACTTTTGTAGATATATGGAATATGGATTTAGAGCATGAAGATTATTTGTTTATTGT AGGATGAATTAACCTCCAGTGTAAATGATTTAGGCAGTATATTCTCCTGCTTTTATGTTTTTGATCTTTTAATAATTAAA CTAACATCTCCAGTGAGAAATATCATCCTTCTGAAACAAACGTAGAACTTTCCTAGGATATAGTTATATATGTCAATCAG GTTTAAGTAAACACTTGTGATATATCTCCTGGTGGAAATGATATATGTTCTTAACATATGGATATTACCATATTCTTCTA CATGGTAGTAAAGCTGATTGTTGTTGCAGTCTTGCAGAGATATTACCATATTCTTTTATGCTAGGACTTTTGTATTAGGT AAAGTTAGTAATAACAGAATGAGAGTTAGTTGGTGCTGTTAGGAGTTTGTTAAAGGGGGCTACATGCTGTATCAGCTATA TATCAGCCAGTGTTAGAGAATGGAGGTTCAGAAAAGTTAGTTGAGGAGAAGGAGGAACCAGGACCTCTTGTAGCCAGGAC TCAGGAGTGGGCGGTGTCAGTTTGTCTACATTGGACAATACCGACTTTCTTGCTAGAATTCTCAATATAAGATTCATTCA TTCTTCTGAATTCTGAACCAGTTTTATCACTTTTTTATTACTGATAATCATGAGCATGTGAAGAACCTGTTCCCTATTCC TGAATATAGGGGCCAAATCATGCTGCAGTCACTGCATGTGCTACTGGATCACATTCTATTGGTGATGCCGTGAGAATGAT TCAATTTGGCGATGCAGATGTTATGGTAGCTGGAGGCACAGAGTCCAGTATTGACGCATTATCCATTGCCGGATTCTGCA GGTAAAGTCTGATTGACACCTTGTATCTTCTGTTAGTTAAACCACCTTAGTAATCTGTTGTCCATTTTCCTCTAATATTT TAAACTTTATGTGTGAAACTTGCAGGTCTCGAGCTTTGTCTACAAAATATAATTCAAGCCCCCAAGAAGCATCACGACCG TTTGATAGTGGTCGAGATGGGTTTGTGTGAGTATAACAACATTGTAGATTTGTTTCTAATTATAGTAATTTATTTCTCTT ACTTGGTATTTGTTTTCTGACTTCAAATTATTGCTTTGTTTGTCTTTCTTCTTATATCCAAGTTATATTTTTGCTCAGGA TAGGTGAAGGTTCTGGAGTCATGGTCTTGGAGGTTGGTTAAGAAATTTATTCTGTATCATCTATCCCTCCAATTCCTCTT CACCTACTTTGTTAAATCTTGACCTTTCTTGTATATTTGTTCCCTCCATTGTTTAGGAATTCGAGCATGCTAGAAATCGA GGAGCCAAAATCTATGCAGAGGTTCGTGGCTATGGGATGTCAGGTAGTTTGTTGCAGGATATGTAGAATTTTCTCTCTTG TCTTAGTTTTACATGTGGTTGACTTCTTTTTATCTGGATTTTGACTAGGTGATGCATATCATATTACTCAACCTCCTAGT GATGGAAGAGGTGCTATTTTGGCCATGACTCGCGCTTTAAGACAGGTTTGTTTTATCATTCTATGTTGATTTGTATGTTA TGTAACAATAGAGGTTTTCTGTTGGCTGAGCTGCCAACAATAAGTATACATGTCCTGATGGTATGGCCTGTTATATATAT TTTAGTCTACCGCATAATTTATTTTGGTATTCAGTTATTTTCATAAAAATATAAGTTAGATATTTTCTCCCCTTTTCACT TCCCCTGTAATTAGTGTGTACAGAAGATGGCCAAACCATTGTTAGAATCAGCATGTGGGATGTTAGCTAAGTTTGAAAGG AAGAAAAATTATCATGTTCAAGAGTAGATATTTCAGTGCCTTTGGCATTTATTATTTGAGACCGCTCTAGATGCCTCTTG TTTAGCAGAAATTAAGTCTTCATGATTAAGAATTCAACTCTTCTGGCATATCGTACTTTTGTTTGCTCTCTTCATTCGTG GCTTAGCCACAGTCTAGATGATCTTCATTTTAAGTGATTGCCTTCTCCTAAATTGCAGTCAGGTCTTCATCCTTCTGATG TACATTACATAAATGCGCATGCTACATCTACAACTTTGGGCAAGTGAAGTAAACCCTCACTGATTCCAGCAATTTAAGCT TGAATATTTATTATTTTGGATACTTCATATCTGGATGTTTGTGCTTATTTCATCAACTATCTCACCAGAATCTTCTATAC AGGTGATGCAATAGAAGCGAATGCTATCAAAACCATATTTTCTGATCATGCTGACTCATCTTCTTTCGCCTTCTCTTCCA CCAAGGTAAATGTGATTGCAAACTGTGTGTGACCAATAAATTATATGCTTATCTGATTAGCAGTCTAATCTGAAACTCAT CCATGGGAATGGAGATGCTGTGTTATACTTTTTTTTATAACTTATTTGGATGGGGTGAACGATGATACATTGATAATTCA TTTTTCTAACTATACATTTTTTTGGGTAAGATTTTCTTCCAATACATGCTGGATCATGTCCATGACATTTCCATAATTTC TGTTTTCAGGGGGCTATTGGTCATCTTCTAGGTGCTGCTGGAGCTGTTGAAGCAATATTTGCAGTTTTGGCAATACGACA TGTAATTAAATATTTCACGTTTTATGTACTTGCATCATTGAAGTTGTGGCGAAGCATTTTTGCACATACTGTTGCTTTTG TCTTAATCTATAGCCATATACGCTTAATCTAATAGAGTATCATATGATGTTCTCATCGCAGGGAATTGCTCCATTAACTC TTAATTTAACTAAGCCAGATCCCGTATTCAGTGATGGTTTCATGCCATTGACTACTTCAGAGGAGATACCAATTAGAGTA GCTATGTCAAATTCATTTGGTTTTGGAGGAACAAATTCGTCCCTACTTTTTGCTCATACTGAATCAGACTAATGAGATAG TTGCATCTCACTCCATTGGTATTATTCTACAAGAGCTGATTGCATTATGCTGAGGAGAGTTTAATAGCCTAAAATTCTTG GTGGAATATGTATGCCTGAATGTTGTCTTCTACCATGTACATTTTAATAATGCTATTGCTTTTGCTCATTAGTTTTAGCT CTAAAAAATATTCAAAACCCGAATTGTTGACTATTCAGCAGTGGTTTCTATTGCGAGTTCTGAAACTTGAAAGGGAAGGT TCAGCAGGTTTTTCTTATGATAATTGCATTGTGGAGCCATTATAGATAGACCAGGATGGTTGGCGGTTTTGTTTGAATTG AAATGAATTAACCAAATTGTTTGACGTCTATTGTATTTCATTCCTATGGCTTCTTTCTGTCCTTTACCAGACAAAGTCCA AGTATGTCTCCTCACTTTGTCATTAGGCAAATGGACAACTGTTGGACGGTGGGAGCTTTTTGCACATTATAAAGATTCAG TCTGAGTGAATCTTAGACCAAAAAGAAGAAGATTGAGTGAGTCTTAGACCAGG
CDS sequence (LotjaGi5g1v0152000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCATGGCGGTGCGTGCAGCTTCACGCAGAGCTTTCATCTCCTTCTATCGAACCGTTTCTTCAACTGCATCTTCAGG TGGAGCTCTTCCACCTCCTCCGGTTGTTTCTTCCCGAAGAGTAGTTGTCACCGGTTTGGGCATGGTGACACCTCTTGGTT GTGGGGTGGATAAAACTTGGAAGCACCTGATTGGTGGGGAATGTGGGGTAAGGGCATTGTGTTTGGAGGATCTCAAGATG AATGGTTTTGATAGAGAAACCCAGTTGAGTACATTTGAGCAGTTGACATCCAAAGTTGCTGCGGTTGTGCCCACAGGAAC GAACCCGGGTGAATTCAATGAGGAATTGTGGCTTAATTCTAAGGACCATCGATCCATAGCAAGGTTTATAGCGTATGCAC TATGTGCTGCTGAGGAAGCTCTTAAAGATTCCAATTGGTTTCCCACTGAGCAGGAACACAAGGAAAGAACGGGGGTGTCT ATTGGTGGGGGAACCGGAAGCATTAGTGACATCTTAGATTCTGCACAACTGATATGTGAGAAGCGTCTTCGTCGCCTTAG TCCATTTTTTATCCCACGGATATTGATCAATATGGCATCAGGTCACGTAAGCATTAAATATGGGTTCCAGGGGCCAAATC ATGCTGCAGTCACTGCATGTGCTACTGGATCACATTCTATTGGTGATGCCGTGAGAATGATTCAATTTGGCGATGCAGAT GTTATGGTAGCTGGAGGCACAGAGTCCAGTATTGACGCATTATCCATTGCCGGATTCTGCAGGTCTCGAGCTTTGTCTAC AAAATATAATTCAAGCCCCCAAGAAGCATCACGACCGTTTGATAGTGGTCGAGATGGGTTTGTGATAGGTGAAGGTTCTG GAGTCATGGTCTTGGAGGAATTCGAGCATGCTAGAAATCGAGGAGCCAAAATCTATGCAGAGGTTCGTGGCTATGGGATG TCAGGTGATGCATATCATATTACTCAACCTCCTAGTGATGGAAGAGGTGCTATTTTGGCCATGACTCGCGCTTTAAGACA GTCAGGTCTTCATCCTTCTGATGTACATTACATAAATGCGCATGCTACATCTACAACTTTGGGCAAGTGA
Protein sequence (LotjaGi5g1v0152000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGMAVRAASRRAFISFYRTVSSTASSGGALPPPPVVSSRRVVVTGLGMVTPLGCGVDKTWKHLIGGECGVRALCLEDLKM NGFDRETQLSTFEQLTSKVAAVVPTGTNPGEFNEELWLNSKDHRSIARFIAYALCAAEEALKDSNWFPTEQEHKERTGVS IGGGTGSISDILDSAQLICEKRLRRLSPFFIPRILINMASGHVSIKYGFQGPNHAAVTACATGSHSIGDAVRMIQFGDAD VMVAGGTESSIDALSIAGFCRSRALSTKYNSSPQEASRPFDSGRDGFVIGEGSGVMVLEEFEHARNRGAKIYAEVRGYGM SGDAYHITQPPSDGRGAILAMTRALRQSGLHPSDVHYINAHATSTTLGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| Gene3D | 34 | 312 | 279 | 3.6E-82 | ||
| PANTHER | 37 | 368 | 332 | 9.9E-152 | – | |
| PANTHER | 37 | 368 | 332 | 9.9E-152 | ||
| Pfam | 39 | 304 | 266 | 3.8E-54 | ||
| SUPERFAMILY | 39 | 311 | 273 | 1.61E-68 | ||
| SMART | 41 | 369 | 329 | 4.4E-6 | ||
| CDD | 44 | 368 | 325 | 5.21446E-144 | – | |
| ProSitePatterns | 211 | 227 | 17 | - | ||
| SUPERFAMILY | 284 | 367 | 84 | 1.57E-15 | ||
| Pfam | 312 | 368 | 57 | 2.5E-13 | ||
| Gene3D | 314 | 369 | 56 | 1.8E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi5g1v0152000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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