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IPR018201 is a Beta-ketoacyl synthase, active site.
<p>This entry represents the active site of beta-ketoacyl synthases from bacteria and eukaryotes.</p> <p>Fatty acid synthases (FASs) and polyketide synthases (PKSs) are closely related and have a common evolutionary history. FASs and PKSs share a similar enzymatic domain structure in which acyl transferase (AT), ketosynthase (KS) and an acyl carrier protein (ACP) form the core structure for condensation of acyl units, and are essential for both PKSs and FASs [[cite:PUB00103750]].</p> <p>Beta-ketoacyl-ACP synthase (EC 2.3.1.41) (KAS, also known as 3-oxoacyl synthase or ketoacyl synthase, KS) [[cite:PUB00000791]] is the enzyme that catalyses the condensation of malonyl-ACP with the growing fatty acid chain. The condensation reaction is a two step process: the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide.</p> <p>KASs fall into five families separated by their characteristic primary structures, each having members with the same catalytic residues, mechanisms, and tertiary structures. KS3, a very large family, is composed of bacterial and eukaryotic 3-ketoacyl-ACP synthases I and II, often found in multidomain fatty acid and polyketide synthases [[cite:PUB00103749]].</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Beta-ketoacyl-ACP synthetase I [Glycine max] gi|351724925|ref|NP_001238610.1| | 17 | ||
– | PREDICTED: 3-oxoacyl-[acyl]-carrier-protein] gi|502114770|ref|XP_004495046.1| | 10 | ||
– | PREDICTED: 3-oxoacyl-[acyl]-carrier-protein] gi|502114770|ref|XP_004495046.1| | 17 | ||
– | PREDICTED: 3-oxoacyl-[acyl]-carrier-protein] gi|502086144|ref|XP_004488123.1| | 10 | ||
– | PREDICTED: 3-oxoacyl-[acyl]-carrier-protein] gi|502086144|ref|XP_004488123.1| | 17 | ||
– | Beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] gi|210110425|gb|ACJ07142.1| | 23 | ||
– | PREDICTED: 3-oxoacyl-[acyl]-carrier-protein] gi|356523620|ref|XP_003530435.1| | 17 | ||
– | Plastid 3-keto-acyl-ACP synthase II-A [Glycine max] gi|59710572|gb|AAW88763.1| | 17 | ||
– | Beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] gi|210110425|gb|ACJ07142.1| | 16 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|Q9M508|Q9M508_SOYBN Beta-ketoacyl-ACP synthetase I; Found in the gene: LotjaGi4g1v0024200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr|D8KXZ0|D8KXZ0_ARAHY Beta-ketoacyl-ACP synthase II-1; Found in the gene: LotjaGi4g1v0321700 | 24 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr|A0A0L9UY00|A0A0L9UY00_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0321700 | 24 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr|V7CCC5|V7CCC5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0321700 | 24 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A151RI86|A0A151RI86_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0437100 | 22 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437100 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437100 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A151RI86|A0A151RI86_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 17 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT2G04540.1 Beta-ketoacyl synthase; Swiss-Prot: sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase, mitochondrial; TrEMBL-Plants: tr|A0A072VM15|A0A072VM15_MEDTR 3-oxoacyl-(Acyl carrier) synthase II; Found in the gene: LotjaGi5g1v0152000 | 16 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT2G04540.1 Beta-ketoacyl synthase; Swiss-Prot: sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase, mitochondrial; TrEMBL-Plants: tr|A0A072VM15|A0A072VM15_MEDTR 3-oxoacyl-(Acyl carrier) synthase II; Found in the gene: LotjaGi5g1v0152000 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr|A0A0L9UY00|A0A0L9UY00_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0221600 | 18 | ||
– | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr|A0A151SST6|A0A151SST6_CAJCA 3-oxoacyl-[acyl]-carrier-protein] synthase; Found in the gene: LotjaGi6g1v0221600 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd00834 | CDD | 1 | 3.57 |