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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0155300 |
| Transcript ID | LotjaGi5g1v0155300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase family protein; TAIR: AT5G43320.1 casein kinase I-like 8; Swiss-Prot: sp|Q6K9N1|CKI1_ORYSJ Casein kinase 1; TrEMBL-Plants: tr|A0A067KZF1|A0A067KZF1_JATCU Uncharacterized protein; Found in the gene: LotjaGi5g1v0155300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40209705..40211427) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATCATGTGATTGGTGGCAAGTTTAAACTGGGAAGAAAAATTGGGAGTGGATCTTTTGGGGAACTCTATTTGGGTAT GCTTCTGTTTGTTTCCTTAATTTGTTTAAAACAATTGTTCTTTTTTTTTTCTTCTTTTGCTACATGGTATTGTATTGTTT TATATTTTTTGAACATGTTCTTTCTTTTTTAGGTGTTAATGTACAAACTGGAGAGGAGGTTGCTGTTAAGCTGGTATGTT AAATTCTTTCTTCAAGCTTTTGACCCCTTTTTATGTCTGTGTGGGCTTCAATTTTTCATTAAAAATTTTCATGAATTTCG AGATAAATTGACCCTTTTTGTTGTGGTTCTGAATATATTTATAGCATGTCATCTTAAATATATATAATGATACAATCACC TTGTTTTACTTTGTTATGTGTTTGTATGTGTGTGTTGTGCTCTATAAGGTCGTTTATTACTCTAAATGGTATCTATGGAG CCTAGATGCTCCAAACTTGCTAAAGTATCGATGTTGTACCAGGCTTGTTAATAGCGCGCCATAGCGGCGCAATAGCACTA AAGCGTAGCGCCCTGGGGGTTCACCGCTACTCCCCTATTCATTGCTATTGTCCGCTATTTGCGTCTATAGCGCTTGAAAT AGTGTTTTTTGGGCTTGCCGCTATGCTACGCTATCCGCCATTAACAACCCTGGTACCTGTATCTTTTGCAGCTGCTGGAT GCACACATTGGTTCATATTTTTAGAATACATTTTATGTGGGGTTATCCATTACTTTTTGCTGGTTTTTGAAAGAATATTT GTCACCAATATTAACTGCTCATGATATTCTATATTTTCCGAATTCCTAATCACCCTTTCTGTTCACCAAAATATTCAGGA ACCTGTGAAAACCAGGCACCCACAGCTTCACTATGAGTCAAAGTTGTATATGCTTCTTCAAGGAGGAAGTAAGTCTGCAC CCCTCTTTCCTTTAATATTTAGTGTACTATAAGTATTTCCTGACCTAATGCTAGAGGCTTCATGTTAGAAATGTTTCTTA ATCATTGTTTCTTGACTCTGGAGTCTGAACTCTGGAGTATAATAACATGATTCATCAACTGAATCTTCTAATAATGAGAT CACGAACCAATTGTCTCAAACCATGCTCTCAAAGCAAAGTGAAGAACTAAAGGAATGTTATAAAGTACTCAGCATGTTTC CTTGAGTAATCCAATATGATTTTCCTTCATGAAGCGGGGATTCCCCATCTCAAGTGGTTTGGAGTTGAGGGAGACTACAA TGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAGTTCACATTGAAGACAG TGTTAATGCTTGCTGATCAATTAGTAAGTCGATGTGCCAACTATTGTTAAAGAAGTTACGTTAAATAGTGAAACTAATTA CTCATCTGCTTCATGTTCTCATTTTCAGATTAACAGAGTTGAGTATATGCATTCAAGAGGTTTCCTTCACCGTGACATTA AGCCAGACAATTTTCTGATGGGCCTAGGACGTAAAGCAAATCAAGTATGTTATTGTTGAAGATTATGAATTTTTATTTAT CTATTTTTTTATTCTCATATCTATTATAGAAACAATGTATGTCTTGTGAAGTTTGATGGAGAGTAACGTGAGAAACCTAA ATGATGTATATATGATTATCATTGACCTGGCAAAGGATTATGA
CDS sequence (LotjaGi5g1v0155300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCATGTGATTGGTGGCAAGTTTAAACTGGGAAGAAAAATTGGGAGTGGATCTTTTGGGGAACTCTATTTGGGTGT TAATGTACAAACTGGAGAGGAGGTTGCTGTTAAGCTGGAACCTGTGAAAACCAGGCACCCACAGCTTCACTATGAGTCAA AGTTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTCATG GTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAGTTCACATTGAAGACAGTGTTAAT GCTTGCTGATCAATTAATTAACAGAGTTGAGTATATGCATTCAAGAGGTTTCCTTCACCGTGACATTAAGCCAGACAATT TTCTGATGGGCCTAGGACGTAAAGCAAATCAAAAACAATGTATGTCTTGTGAAGTTTGA
Protein sequence (LotjaGi5g1v0155300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVM VIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQKQCMSCEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 144 | 144 | 1.7E-87 | – | |
| PANTHER | 1 | 144 | 144 | 1.7E-87 | – | |
| Gene3D | 2 | 85 | 84 | 6.6E-40 | – | |
| SUPERFAMILY | 4 | 139 | 136 | 1.5E-41 | ||
| SMART | 9 | 148 | 140 | 2.6E-4 | ||
| ProSiteProfiles | 9 | 152 | 144 | 20.711 | ||
| Pfam | 10 | 136 | 127 | 6.8E-18 | ||
| ProSitePatterns | 15 | 38 | 24 | - | ||
| Gene3D | 86 | 150 | 65 | 5.3E-17 | – | |
| ProSitePatterns | 124 | 136 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0155300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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