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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0160300 |
| Transcript ID | LotjaGi5g1v0160300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine-rich repeat secretory protein; TAIR: AT1G04520.1 plasmodesmata-located protein 2; Swiss-Prot: sp|Q6NM73|CRRS3_ARATH Cysteine-rich repeat secretory protein 3; TrEMBL-Plants: tr|I3SYW5|I3SYW5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0160300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:41059383..41067096) extracted from Lotus japonicus Gifu genome v1.2.
TGTGCGTGAACTACGCACTTAAAAGTACGTGTGAAAAAGGATGTGAAATTAAATGAGACGGTGGTGACATTAACAATACC CTCTTAAGAGTTTGTAGGTCTATCAGTTCGACTCCTCTAAAATGAGGGGAGTCGATAGAACATTGTTACACTCTAGTCGC ATAAGAGTTAGATGATTAGGTTAAAAAAGAGAGGTTAAAAAGTCATGGATAGAAAAGAGAAAGAGAGCACAATGCACATC TAGAGAGGCATTACACATTGGGCTACCCATCCATCCATCCAAAGGAAAGTGAATCCCAAGAACACAAAAACCAGAACGTG AGTCTCTCACAAATCCTTTTCCCTACTGAGTCAGCAAAAACAAAAATCCAACTATCAATCCCCACAACTTCCTTTGATTC CTTTCCTTAATCAGAGCCTTGCTTATGCTCTCTGAATCTGAAAGTTCCCAACTTTGAATCCTTTTCCATCAAAACTGCCA TGTTTTGATCCCTCTCAAGCCTCAACACTACAAACACTCAAATGGGTTTTCCTAGAAATCCCCTCTTCCTTTCTCTGTTC TTGTTTTTGCTCACAAATCTGGGTCTACTACCCCAACTAGCTGAATCTGCTGCTGCTTACACAAGCTTGGTCTACAAGGG TTGTTCAAAGGACACTTTCTCAGATCCAAATGGTGTTTACTCTCAAGCTCTTTCTGCACTATTTGGGTCACTGGTTTCAC AATCCACCAAAGGAAAGTTCTTTAAGGCCACCACTGGTAGTGGCCAAAGCAGCATAACTGGTCTCTTCCAATGCAGAGGG GATCTGAGCAATTCTGACTGCTACAACTGTGTGAGCAAGCTCCCAGTTTTGTCTGATAAGCTCTGTGGTAAGACTGTAGC TGCAAGGGTTCAGCTTCAAGGTTGCTACATGCTGTACGAGGTTGCTGGGTTTGCTCAAATCTCAGGAATGGAAATGCTGT TCAAGAGTTGTGGGACAACGAATGCTGCTGGAAGAGGGTTTGAGGAGAGAAGGGACACTGCATTTTCTGTGATGGCAAAT GGGGTTGTCAGTGGCCATGGATTCTATGCTACCAGCTACCAGTCTCTTTATGTGATGGGGCAATGTGAAGGGGATGTTGG TGATTCGGATTGTGGGCAGTGTGTGAAATTTGCTGTGCAGAAAGCTCAAGTTGAATGTGGGAGCTCTATTTCAGGCCAAG TCTATTTGCACAAGTGCTTCATGAGTTATAATTATTACCCAAATGGGGTTCCAAGACACGCCTCTTCTGCAGGATCATCC TCTTCTTCAGGCTCTTCATCTTTTTCTGGTAATAACTAATACCCAGACACTCATAAGTCATTACCAAAAGAGATACCATT GACATAAGTTTTGGGAGAAAAGAAAGTGTCTGTCTGTTTTACTTGTTAAATTTCAGATATGAATAGATAAGTGTTTATAG AAGATAGAACAACTCTATTTCTAAGCTAGCTTACCGGGTAGAGTTAGGTTTAACGCGAATTCTAAAATTATATCAGAGCT TATCCTAGATCTGTCTATTGGATACCACCCATATATGGGTCACCCGCATATGTTCATTCTTGCAAACTTCACATAAAGAT ATCCGGCCCTAAGCGTGAGGCCTGACCTGAATTCTAAGAGAGCCCAATTTTGTAATACCATTCTCTAAGTGTCCCTATCT ATCTTCAGAGTAAAAGTCCAACTTTGCTGAATATATATATCGTATTTTAATTATTGTGTTATATGTGTCTACTTGATGCA ATGACAGGGCAAAATGCAGGAAAGACAGTAGCTATAATATTAGGAGGGGCAGCTGGGGTGGCGTTTTTGATCATTATGTT ATTATTTGCCAGGAATTTGATGAAGAAACATGATGGTAGGTGCTATACATGGCTATATGGAATGAATGATTTCTCTATTA CTCAATTGATACTTTACAATCCTACTTATTCTTATTCTGATTCTGTCATTTTACCATGTCATTTTCTTGTACAGATTATT GACAGTAGAAGATGTTTTACTGTGGAGGCAAAATTCTCCTTGAAGTGGATTGTTTTTATATATATAGCTTTTGAGTGAAT GAGATGGGCAATTTCTGGTAAATAGAGTTAGCAGATAGAGAAAGAATCTAGGCCGGTTCAATGTGGGGACTACTAATTCT TGTAGCTAGGTAAGAAGATTTTGTTGTGAAGAACAGTGTAATTAGCTCATGCAAGTGAGATTTTTTTGTATTACAAGGGA AAGAGGTATTATACCCAGAGGAATGAATGTTATCCTGAATGGATGGAAAATTTTGTGCCTACTACCCCTTTAGCCATGTG GATGATTCTCTTTTCCCTCATCTCAATACTATTGACTCTACATTTTCTGCACTAACTTTAACTTTTTTTTAAAGTTGCAA CTTGCAAGTTGTAGCTCCCTCTCTCTTCACTTTCCTTTACTCCCACCAGTTGTTTTGGTTTTTGTGTTGAGGAAAGACAA TGACAGCTACATAACTTCAAGTCAATATAATTAATTAAACGATTATATTGGGGAGAAGAAAAAGTTGACACAGTATTTGG GGGCTTCTTGGTGGCATCAACCTAAAAAGTCTGCAATAAACCAAGACAAGGAATCGTTTGGCATGAGCATGTGCCTTGCC TGAGTCTTCACTCTTCTGCTTTCTTCTCTCTCTCTCTCTTCCTCCCTAGGAAAATGCTGTTGTTTGGCCAATTTACTTCT TATTTATTTTCTCAGAAAAATATGCTAGTTTTGGATTCACTGTTGTTTAGCATTAGCTATGAATGTTTGTTAGTAAGCTT AGTAAGTTGCGAGTGGTACCTTAATGCTTGGCATTTTAACATGAAGTATATTCTGGGTTTACGTTTGATAATTTTGGCAC ATGAAACTTTAAAGGGGCAGAAAGTTTGCCAACTCTACAGTTGAAGCATGTTGGAACTCGGGAGTGTCAGTAATCGAAGT CAAAATCCTTTTTACAAGGACTGTTTGATGCAATAAATTGAATCTTTTCATTGGCTCATGACAAATTGTTAAAGAATTAG CAGAATATGTTTCAAAATGGCTGTGGTTAGCTTATGTTCTGTTTGGCATGAATGGTTTAATTTTTACCAGAACACTGTCA CCATCTGGCCTCCACTCCCTTCCAAACTCCAAACTGTTTAGCTATTCAAGGAAAAGAAGAGACATTTTCTCCAACTCATG GTTTGAGCCAAAGGTGCTTTATTTGTAAACATATTCTTCTATTACATAGGATATCCTATTTCTTCTTATTAAGTGTGCTT CTAAGGTGAACTAACGCTCAAGTCTTCTACGAGTGTAATACCTCTTTTAACCATTTGATTTAATCGTATTTTATTGGATG GTCAGGATTGTCTACTTGCTACTTGTCAATTCAGACTTTTGTTAATTGTAGATTCCCCCATACTTGGATTTGATTCTCAC TTTAACCTCATCCACACTTACGAAGCTTACTCAACCATTACATAATTGCCGCTTTCGACTAGCCCCCACCGTCCACGCCA CCGCAGCCATCTTCGGCTAGCCAACGTACCTATCATGGAGATTATGCTCCATGCCGTCAATGATGGTAGCCTTGGTTACG GCGACCAAGCCTAGGAGGATGATTAGTCCAATGTCGAGTACCCCCTCTCCTCTGAAGAAGAATATGACGACTAAAATCTC GAGAAGCCCTGCGATCATCCATATGCTTGAACAAGATGAAGGTGTAGCCCTTTGATTTTCCTGAGACCTTGTCAGTGACG ACTTTGCAATCCTCGATCTCGTCGTACTTGCTAAAGATGTTGGTTAGGGTTTCAACGATGGTGTCCCAGCCGCACATGAA GATCTTTCGGTCAGCAGGGTTCACATCGCCAACGTTCATGACAAAATCATGGTACTTCTCCGAGGCTTGCTTCATGAGAG AGTGAAACCACTCCCCAGTGAAGGGTTCTAGAAGCTTCCTGTCAGGTTCATCCTCTAATCTAAGGTCTTCTTCATTGTTG TTGCTTTCATTTGGGATATTCGGAACAATAGATTCCGACGCGGCAGCCTGGTTCAAAGCTTTTGCATTGTCTTCTAGTCT TTCTTCTGCTAGTTCTAGCTCTGGTGCTGCTTTTGTTCTTGGTTCTTCCTCTACGGAAACATCGTTTTATGGTTAACCTT TTGGTTCCTATTCTTGTTCTTCATCAACAACCATGTTGTTGGGTTCTTCTATATCCGAGGTTGGTTCAGGGTGGTGGGGT TGAATGCAACTATTATTTTTCTTTTCAATTAAAAAGGTTGGATAGTTTTTATTTACCACCATTGTCAACTGTCAAGTGAT TATGATACTTACATGGCCTACATGTATAAAGTACAAAAAACAGTGTCTCAAATTCTTCAACAAAATTCACAAATTGGATA AATTATATTGTTCACTTGATGTATAATGGATGAATATTATAAATTTATATCATGTGGTAGAGGCAGCCAAAAAAGAAGAA GAAATAGCTGAACTGTGTAAGTCATCTAGATGGTCAGGATGATTCTTGGTTGTAAAGGTTCACTGTCGTATTTGATTCAC AAGTCACCAAAATCAGAAAGGCAAAGACTATAATAGTATAGATAGTCCTCCATCTGTATATCATGAGAATGTATTCTAGG CTCATTTATCTCTTTCTCTTCGCAGCAGCTATGCTTAAGACTTGGACAGGGCATTCAAGGCATAGCCACATCATGAACAA TCATTTGATTTTTCTTACTATTGCTACTGGCCTCTATTCCCATGGTTAATGACTTGAAATAGCAAATAATTAGCTCATGT GCAAGAGGAATGCATTAGGAGAAGGCAAATTCCCAACCTGCAGTTTGTAAAAGTTAACTGAAGAGCATGAAATTCCTTTA CAACGGCTTTGCCATGTCCTGCAAACAAAGGTGACAGAAGAGCGTGATACACCATTCAATTTAGCAAAAGCAAAATTAGA ATGGTATCACAAAGAAAAGAGTAAGGAATAAACAGATATTCATATTAGTATATTACCATAGATCAACCTCTTGAAGATCA TTTTGGGGCCACTATCAATCTCAACCTTGAATTCCTGATCGCAATGAACCCGGGCTTCACTTTGTATATATCCTAAATTC ACTTGATCACTTTTGACATTAACCCTGGATCACAATCAAATTACGGAACCTCTTTCTACCAGTAGTTCCCGCAAGAACAC TCACCATTTCTAAAATGGTGAAACCTTCTCCTATCTCGCACAACTATCTCTCGCTCTACTACTTTAGAAATAAACTTGAA TGCATTATGGCAGTCCCCGCACATCCTCAAATTTTTGAAAACCCGAATCGTAGCTCCTAAAGGAAGCTTCAAAATTCCAT AAACAACAGCTAGCTTTTCGCTGTGGGTGGACAAGGCATGTTCTTTATGCTCAGATTCCATATCATGTAATACAAACTTT GTATCAGGAATATACCCCAATTTCCTCATTTCAATGACCAGTTGCTCCAGATATTTATAAACTGCATGCACCTCAGGGTG CACAGCATCATCAACTAAAAACACATGGACCATGTTTTCAATCTCAATCCAACTACATCCAGGTTCCTTCTTAACCCCTC TTTCCCTCATTAATTTTCTCACCCTGGCTACTTCATCCCACTTACCTAAGTGTGCATACATATTGGAAAGGATTATGTAG GTTCCATCCTGTTCGGGCGTAAGCTCAAAGAGCCGCTCAGCAGCTTGAATACCCAATTCAATGTTCCCATGGATCCGACA ACCAGCAAGAAGAGACTCCCAAATAGGTGCGCTTGGCTCAAAAGGCATTGACTCAGTTACCTTCTTTGCCTCTGAGAACT TACCGGCACGACATAACAAATCAATCAAACGAGCATAATGATCCTCCCCTGGCGTCATACCATAGTGAGTGCACATTGAA TCAAAATAATGCTGTCCCTCTTTGACCAACCCTGCATGGCTACAAGCAGAAAGAATTGTGAGAAAAGTTATCCGATCAGG CAATATATCTTCCTTCAACATCTGCTCATAAAGTTGAATGGCTTGAACACCACGTCCATGCTGTGCAAGAGCTGCGATCA TGGCATTCCAGGATACTGAATCCACATATGGCATAGTGAGAAACACCATATCAGCGTATCCAACAACACCACACTTTGCA TACATAGTGATCAGCGCATTCCCTGCAGAAAGACTCGAATCATGACCTAACTGGATCACCTGAGAATGAATTTGTTGTCC ATTATCCAATGATCCAAGAACACCACAAGCTTTAATCGCTCCAGCATATGCATAATCACACGGTTCCAGTCCCTCTGACT TCATCTGGTTGAACAGCTTCAAACTTTCTTCTCCAAAACCACTCTCTGCTAACCCTGATATCATCACAGTCCATGTCAGC AGGTTCCTCTCTGGCACCTCCCTGAAAATAAACTTAGCTTCCTCAAGTCTCCGTGCATTAATATACCCCGACAAAATCGC ATTCCACGAAACAAGATCCCTCACAGGCATCTTATCAAAAACCTCCCTTGCCTGTACCAATTTACCACACTTAGTATAAA AAGTAATCAAAGCATTATTCACAGACAGAATAAAATGCTCTGAAGGCTGCACCACTGTCCTGAGAACATAAGCATGCAAC TGCCTTCCACAATTGAAAAGCCCAGTATTAAAAGAAGCACTGATCAAACTGGTGTAAGTATACTCATCCATCTGAATTCC CATGGAGTGCATTTTCCTGAATGTGTCAAAAGCCTCTTCATATAAACCGTGGCGCACGTAACCAGAAATCATTGCATTCC ACGCAACGGCGATTGGATGAGTCATTCCATCAAGAAGCTTCCTCGCGGAAGCGAGATCATCGTTCCTCACGTATCCAGCA ATCATGGTGGTCCATGAAGGTTCATCTTTCTGACTCAAAGGCGCCTCATCAAACAGCTTCCTAGCAGAAGCCATCAACAC GGGAGACTCAACCAAAGTCGACGAAGCGCAACAAATGTAGCAGCTCAACAACGTGTTCAACACAGAAGGCACACACATCA CACCCCACTTGACAACATCACAGTGCAGCTGCTGGCAATGCCACTCCTCCTCCGCGATCAACGACATCGCGCCAAGCACA GTGGAGAAGCTAAAAGGGTCGGGTGCAAAACCGTCCCTCTTCATGCGAACGAAGAGCTTGACAGCAGCATGGCCATCCAG GTTGTGGGAGTAGGCTTTGACCATGGCATTGTAGCTGATGGTGTCGCGGAGGGTGACCGGGGTGGCATTGAAGAGTTTCT CGGCGAGCTTGACGTTGCCGGCGGCGGAATACGCTGAGAGGAGGGTGGTTCGTGAGAAGATGTCTGGGTTGGGCGTTTTG TCGAACAAGTGGTGGGCGTAAGGGATGTTGGAGGATTTGCAGTAGATATCAATGAGGCGGTTGCGGATGAGAGGGGTGAG TCTGAAGCCGGTGGTGAGGATGTGGGCGTGGATGGCGCGGGCGAGGGTTTGGGTGGCGGAAGGGTGATTGAGTTGGGCTA GGAAAAGGTTGGCCATGGTGCGAGAGTCCATGGTGGTGTTGTTTGAAGTGACGCTGCTTCATTCAAAAAGTCCAACACGT TGACTCTTTTGAAAGAAGAATGGGGGTAGAAGTAAGAAAGGTGAAGTGAATTTTTTTAGTATCCTTCAATCCAAATCCAA TAGAATGGAAGTGAAACTAACATGTTAATGTGAA
CDS sequence (LotjaGi5g1v0160300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTTCCTAGAAATCCCCTCTTCCTTTCTCTGTTCTTGTTTTTGCTCACAAATCTGGGTCTACTACCCCAACTAGC TGAATCTGCTGCTGCTTACACAAGCTTGGTCTACAAGGGTTGTTCAAAGGACACTTTCTCAGATCCAAATGGTGTTTACT CTCAAGCTCTTTCTGCACTATTTGGGTCACTGGTTTCACAATCCACCAAAGGAAAGTTCTTTAAGGCCACCACTGGTAGT GGCCAAAGCAGCATAACTGGTCTCTTCCAATGCAGAGGGGATCTGAGCAATTCTGACTGCTACAACTGTGTGAGCAAGCT CCCAGTTTTGTCTGATAAGCTCTGTGGTAAGACTGTAGCTGCAAGGGTTCAGCTTCAAGGTTGCTACATGCTGTACGAGG TTGCTGGGTTTGCTCAAATCTCAGGAATGGAAATGCTGTTCAAGAGTTGTGGGACAACGAATGCTGCTGGAAGAGGGTTT GAGGAGAGAAGGGACACTGCATTTTCTGTGATGGCAAATGGGGTTGTCAGTGGCCATGGATTCTATGCTACCAGCTACCA GTCTCTTTATGTGATGGGGCAATGTGAAGGGGATGTTGGTGATTCGGATTGTGGGCAGTGTGTGAAATTTGCTGTGCAGA AAGCTCAAGTTGAATGTGGGAGCTCTATTTCAGGCCAAGTCTATTTGCACAAGTGCTTCATGAGTTATAATTATTACCCA AATGGGGTTCCAAGACACGCCTCTTCTGCAGGATCATCCTCTTCTTCAGGCTCTTCATCTTTTTCTGGGCAAAATGCAGG AAAGACAGTAGCTATAATATTAGGAGGGGCAGCTGGGGTGGCGTTTTTGATCATTATGTTATTATTTGCCAGGAATTTGA TGAAGAAACATGATGATTATTGA
Protein sequence (LotjaGi5g1v0160300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFPRNPLFLSLFLFLLTNLGLLPQLAESAAAYTSLVYKGCSKDTFSDPNGVYSQALSALFGSLVSQSTKGKFFKATTGS GQSSITGLFQCRGDLSNSDCYNCVSKLPVLSDKLCGKTVAARVQLQGCYMLYEVAGFAQISGMEMLFKSCGTTNAAGRGF EERRDTAFSVMANGVVSGHGFYATSYQSLYVMGQCEGDVGDSDCGQCVKFAVQKAQVECGSSISGQVYLHKCFMSYNYYP NGVPRHASSAGSSSSSGSSSFSGQNAGKTVAIILGGAAGVAFLIIMLLFARNLMKKHDDY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| PANTHER | 1 | 299 | 299 | 1.1E-161 | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| PANTHER | 1 | 299 | 299 | 1.1E-161 | – | |
| Phobius | 8 | 18 | 11 | - | – | |
| Phobius | 19 | 29 | 11 | - | – | |
| Phobius | 30 | 269 | 240 | - | – | |
| Gene3D | 32 | 137 | 106 | 2.8E-21 | ||
| ProSiteProfiles | 34 | 137 | 104 | 16.733 | ||
| Pfam | 41 | 133 | 93 | 3.0E-15 | ||
| ProSiteProfiles | 142 | 241 | 100 | 14.769 | ||
| Gene3D | 143 | 240 | 98 | 5.8E-14 | ||
| Pfam | 153 | 237 | 85 | 9.0E-9 | ||
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 270 | 290 | 21 | - | – | |
| Phobius | 291 | 300 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0160300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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