Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0169800 |
Transcript ID | LotjaGi5g1v0169800.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|Q04672|SBP_SOYBN Sucrose-binding protein; TrEMBL-Plants: tr|I1JF86|I1JF86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0169800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:43462654..43471604) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAACTAGAAGACACATAAAGTAAAGTGAAAGAGAGAATCTTTGACTAATGTAATGCCAACAACATCAAGCTTCATAA TTCAATGTCAAGTGGTCCACACATCCACACATTCAGAATACAAAATGGTTCTAAACAAAGCTTAAGTTGTCCAAATTACA TAAAAAACAACAGCAAACACTTCAACCCATGTGCTTCCTAAACGATATCAAAATGTGCACCCATGTGGTGTCAAAAGTAA TGCCAACAAACCACAAAATATTCCCACTTGGTCTGTTCACATTAAATATCTTTCAGCCCTCCATTATTGCTCCACAACCG AGCCCTTACTAACCACAACAACCTTCAACCCTCTCATTTAGCAACTTGAGATTGGAGTGCCTGCACAACTTGAGATGGCT CCTCTTGAACAACAGCAGATCCACCAGCAGATCCACTTCCACCACCAACATTAGATGGCCCTGCTCCATGAACATAGTGC AATCTTGCCATGTCTTGATCCCATTGTTCCCTTAGCATGGCAGGTATTTCATCAAACTGGATCTGATGTTGAACAATATG AATATTAATCATTATTTTTGATGAGAAACTTGTAGATCTGTTTAAAATAAGACCACATGTTATAAGTTTACTTACATTTG CATCTTGTGTGGCATTGATGACCTGAGATGCATCCTCTTGTGTTTCAACTGGCTGAGATCCTTGTCCTGCTGCAACTGGA TCTTGTCCTGGTTCAGACCCTTGTCCTGCTTCTGGTTCTTGACTCTCCACTGGATTTGGGCATCTCCTTGAATTATGGCC ATGCTGACCACACCTACTGCATTTGTGTTTAGCAACAGTCCTGCTGAGTCTTGTGCTACCTAAATCTTCAAAGGGGTCCC TTCTTCTCAGCTTCTTAGGCCTTCCAGGCCCTCTCTTCTTTATGGGAGGAAGTATCTCAGGGTCATTTGTAGGCTGCCAT AACTCTTGGCCATTGATAGGAGTGATCTCATGCCCATATGTAGCTTCATATGCAGCTCTCTTATAGTATGGATGCACAAA ATCTTCTGGTTTCATCCTTTTACATGCTATGGCAGCCACTGCATGCCTGCATGGTATGCCAACCAAATCAAACAGATTGC ATGTGCATGAACTTTTGCTCAAGTCCACCACAAATCCCTCACCTGTTTGCAACATATTGCAGGATTAGGACAGCCATTAT CCATGAAAGTAAACAATGTGTATAAATTCTTATTGGACTTTGACTTGACAACATTGCTTCTTATCCTATCAGACTTCCTC ACTGGCAACTTGAATTTGGCAGGCCTCTTTGTTGGAGAAAATTTTTCAACACAAAAATTATCAAGACCAGGTAACTTCAG TGGTGCATCCACTTGCTTCTTGGATGGAGGTTTAAATGGCTGGTTTTTCTTCTTTGGAGGCTCCACAGCCACTTGCTTCC CCTTGTTCTTTGGTTCTTTTGCTTCTCCTTTCTTCTTTGTAGCCTCCACAGCCACTTGCTTCCCTCTCTTCTTTGAACCA TCCAACTGCTTGTCCTTATTCTTTGGATCACCTGATTGAACTTTCTTGGCTTTCTTCTTTGAACCATCAAGTACCCTGAG GAGATCAATTGGAGTAGTTGGCAGTTCATCAGGAGCATGCTTAACAAAGAGATGTACTTCCCCCCTCTTTACAGCATATT TACCCAACTCTATTGCCTCTTTATCAGTGGACAAAGGCCTGAAATTGCGAATTGCAAAATCCTCGTCTTTCATCGAAAAC ACCTGGAACTTTCCTTTTGTATACCCCAGCTCAGCAATTACATCAAGACTCTCAAAATAACTCCACCTATCACTATCAGC ATCCACAGTGTTTTCTTTGACATCTACGTAGTGCAACCTTGGCTCCTCAACAAATTGTCCAGAGTGATGAATAATGGCTT TGAAAGCCATCCTGATAGAAATGCAGATTAATTACATGCAACATCATGATAGAAATAGAAAGGACAAAGGAACATAATGC TAACATTGGAGTCTACAAATTGATGAACAACAACCCAATGCAAGAATGCATGACCCGACACAACCAAAGCCATACACCCT ACCAAAATCGTAAGAACAGAGAGATAGGCAGAAATAGAAACCAAGGTAGAAATAGAAACCATGTTGAGCTACAAAAGAGA TAGGCAGAGCAGAGGACACACTAACCTTCGTCTCCGTCAATTCCAGTCGCCTTCCTCGCCGTCGCCGCTGTCAAAGTTCG TCGTCGCCGCCGTCAAAGTTCTTCGCTCTTCGCCTGGGATAGAAAGCTAGGTTTCAACTGAGAGAGATTGAAGGGTGGGT CGAGAGATGGGTGAATAGTAAGGGGTAAATGTCAAGTTTAGATTAGGTTTTAGGGTTAATTAGTTTTAGGATTATTTAGT TTAGCTAGGGTTAAATCAGAGGGCTTAATTATAATTTTTAAAAGAATTTTTTTTTATTTAAATGCCATGTCATTTCATTA AATGACGTGGCACGACCACGTGCACGGCTGCCGGAGCTATACCGGCGGCAAGGACGGTTTCCGTACAAACACTTGAGTCT GAGGATGGGGTTAGGAAGATTTTCCGGCGAGGGACGGAAACCAGATCTCGCTCAAAGTTCAGGGACGGTGAACACATTTA ACCCTTCATTATTTCATGAAGTAAGCAATAACAAACGGTTTCTTGCAAAATGTTCAATTGAGTTCAATTTGTTTTCCTAA ATCAAATATTAAACGTGCAGGGTTATATATGTAATTAAAATCATGGTTCTGTTCTATTGACTTGGAGTTACCAAACACAA CACACAGAACATTGTTGTCCTGTTCCATCATGTTCTGTCCTGTTCCGTTCTGTTCTGTCCTATTCCGTTCCATCACCAAA CGCTACCTATAATTTCCTTTATGCAGTGTTTAGTTCTTTCTCTTCTTACTATCTCTTTCTCATCAGCAAAAGCTGACTCC ATTTTTCCGCACATCAACAATAAGCTTTGCATTTGTGACTTGGTCTATCCCACTGTCTTTAATTGCCAAGTTTAGACCAA CCAATCCACCACCTAATTGGAATTTCATTTCAGATTCCAATCATATGTTCCAACAGACAAGAACAAATCATATTAATATA TGTTTGCAAATCATTTTAAAATTGATTCTAAAGCCAGAACTAATTTTGGTGAGAAGCATATGTGAATAGCTTTTGGATTT TAGAATCGATTCTAATGATAGAGAAGTTGATCCAACATATGCTACTAATCAATGAAATTTCCAGTCACTTTCCTCTTGTT CCAGTTCATATGCTACTGATTCACAACTATGTCAAAGTTGCCTAGGTAGGATCCATATTTATACAAGAAAGATGAAAAGT CCCCAGGTGCAAGTTTTGGTAGTCCTGGTATGAGAAAGAGAAACTGTGTCTGTGAAAGAGGTAACTCAACCAATTTCTGG CGAGCATGGAAGCTTATGATGTTAACTGAACAAGATTGGGTGAAGAAGGCAGCCCCAAGGAGGGGCAAATTACCTTCAAA ATTTGTCTTTAGTTTTGCTACGTATTTACTTTTGAAAGGAAAATTTTATTCATCTCAAATTTAATTTGGACAAAAATCAA TTTACAAAACCATGATTATCTAAAATTTCACAAACGCGCGCATGCCGGCTTAGGGAGTATTGGGAAGACTTTGTTGAAGC TTATCTTACAGCTGTTTCCATGTGATAAATTGCTCTTTTAATTCTGACTCAGTATGACAAAGGTCAAATGTCTCTAAAAA ATGCGGCTCCATTTGAACTTTTATGTCAGGATTAAACATTCACTATTTACCATTGCGATTGACACCCGGGTGCTTAAGCA TTTAAACATGTGTTTGTTTAATCTTCTTAAAATATCTTATGATAAACATATTAGTAAAATTCATGTAAACATCCTAGCTG TTTGATCGAACTTCATACTCCCTCCGTTCCAGAAAGTTTGTAGTTTAAGGTTGTGACACAAAGAGTAAGAAAACAATTAT TGATAGTATAATTTGACTAGATTGCCCTTATTTAATTTTAATAGTATGATGTGCAACTATTAAAGTATAATGTAGTTAAT AGAGAAGAGTTGTGGTTGATTAATATGAAAGGTGATAAGTGAGAGAAAATGTATTAAATGAGGGTATAAGTGAAAAAAAT TAGTAAAAAATGCATTAGTTTTCTAAAACAACAAACATTTTGGGATATTGAAAAATAGTGCAAAACAACATGAAACGGAG GGAATATTTATGACGTACTCATCTTCTTTTCCATTCTGATTCAATCTTATTAGTGTGTTGGATACCGTCAACAAATTTTC CACTGAGTGATACACACTGTCGTTCTACCTGGCAGCCATTGCTGATTTTGGTGACACGTATTTTCCACATGTCCTCGTGC ATGCAACTACCACACCATTTCCCTCCATATAAACAACACACTTTCCCTCATGCATATCAAGAAACAAAACAAAGCAAAAT TAGTTTGTTGTTCATCTCTGAACACACCATGGCCACGAAATCACGGTTTTCTTTAGCTATCTTCTTCTTTCTCTTCTTTC TGCTAGCCGTCACTTCAATCTCTGCCATAAGCACAGAAGAAACAGTGGTAGAAGATCCAGAGCTCAAAACATGCAAACAC CAGTGCGAACAGCAACTGCAGTACTGCAAGAGTGACAAACGAATTTGCAAGCAAAGGTGTGAAGGGTATCATGAAATGAA GAAAGAACGAGAGAGGCAAATTGAAGAGGAAACTCGTGAGAGGAAAGAGCATGAGATGGAGGAAAAGAGTAAACATCATC ATCATAGTCAAGAAGAAGAGGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGGAGGAGAAGAAGAAGAAGAA GAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAGAATCCTTTTGTTTTTGAAGATAA AGATTTTGACACTAGATTCGATACAGAGGATGGTAAAATCTGGGTTCTGCAGAAGTTCAGTAAGAAATCCAAGCTTCTTC GAGGCATTGAGAATTTTCGCTTGTCCATTTTGGAAGCTAGAGGACACACTTTCATTTCTCCACGCCACTTTGATTCTGAG GCTGTTCTCTTCAACGTGAAGGGTATGATATGAAGTTACCAAAATCTACTTTTTTATGGTTATTCACAGTTACTATTATT GTTTAATGGAAAATTTCTGAATTTTTTTTACTAGGGCGAGCTATAATTGGGTTGGTGGTTGAAGACAAAACAGAGAGATT CAACATGGAACCTGGAGACATCATGAGAATACCAGCAGGGACCCCTGTCTACATGGTTAACAGAGATGAGAATGAGAGGC TTTTCATTGCCACTTTCCATATACCAGTTTCTACTCCTGGAAATTATGAGGTTAATCACAACTTCTAATTGCATACGTAC AGTGGCGGAACCAGAAATTTTGTGAAGCCTGGGCAATATTTTTAACCGCAATGGATGGTGGCTGCGGGTGGCGACCAATC AGCAGGCGGCAGCCGGCGAACGGGCGAAGGAAGGAGGAGAAAGTGGGTTCAGGGCTTCAGGCCAAACGCGTATGTGTGCG GCTAAAGAATTGAGTGTGTGTTTGGATTAACGTTAGCATGATTAGATCTGACCAAAATTGGATTTGGTAAACGTGAGACG TGAGTTTGAGTGATTTAATTTATGCTTAGATACATAGGTGAACCTAATATGCACCAGTTTTAGGTGGTGTAATTTTACAC CACCTACTTTAACTGGGTATAGCAGGTCAACAAATTATTTTTTTTAAGAAAAAATATAATTAAAAATTTATCATATATTA AATATCTTTAAAAAAAGATGCCTTGACCTGTTATAGCAGGTTAAAAAAAGTGGTCTAAAATTAGACCACTTTAAAAGTGG TCCACATTAGGGGTCACCTAGATACATTGTGAGAAACGAGATTCTTGTAAGAGAATTTTGTTTAGATATTAGAATTGATT TTGAGTGTGTAATGACGAAAATTGATACAAATATTATAATTAATATACATGCTTTGGAGAAATTATTTTTAATGAGAAAT AAACAGATTATATAATTATTAAATATTGTAAATAAACGTTTTTTTTGAAATGTATTGTAAATAAACGTTTGTTGGTTTGT TTTGAGTTTTAAAAAAAATTATTGTAAACAAACACAAAGAAAAACAAACACAATGAAAAATAAACATGATGACAGTTGTA CCCCTCCACTAAGCTCCAACAATCCCAGCCACAAGTATCTTATCTTTTTATTCATTGCAAAGCAGTCTAACCACCTCTGT CCTTCCCCTGTGTTCGTTGTTCCTGTTTTTTCCACTCTTTTCTCAATTATGTTTTTTCTCTTTTCTTCTCCTTTGAACCT GAATCTGTATCTGTTCTTTTTAGCACTTCTTGTGCATTATATATATAATATTATTGGCTTACCCAAAAAAAATCCTTCCA TACTCCACATCTGTCTTTTTCAACAAACCACAATTCCCTTTAAAAAAAACACCCACAATTCACCTCCTTCTCTCTTTTTT TTCTTTCTGCAACAAACAACGACAATTAGCTTTCTTGATGCTGGAATTTCTACCTAAAGTATTGTGCATGCAGAGAACAA AAGTGGATGAGAGTTGCAGAGTGAAAGAACAAGAATGCAGAAGCTAAGATTTCCAGCTTCGGTCAGATCCGATTTTGGGA GAGAAAATCGATTTTGAAGAAACCACCCACAGGCCGCTACCCCTGCTTCACTCACCCTCACCCACATATACAACCCTCTT CACAGTTCACTCACCCTCATCCTCCTTCACCCAATCACCCTGCTTCACCTTCACCCAATTTTGCCCTTTCTCTCTTCTTT TTTTGGACCCAAATGCTTATCTGGTCCAAAGAAAAAAAAAATTATTTCCTTTGAGCCTGGGCAAGGGCCCAGGCAAGCCA GGTGGTGAATCCGCCCCTGCATACATAACAAACCATTTATTTACAATTACAAACTAAAATTCAATCAGGGTTTTTGTTGT CTCAATCACTAAATTTTACTAAATCTTAGCTAAAATAACTTTAGATGGAATAATATTTTAACATGCCCTCAGGCCTCAAC AACCTAGCTCAGACATGTCACATAGTCAAAATATTATTGGACCACGTTGTTCAATACTCACATGTCTGAATTTGAGTAAT ACTTAGCTTGAGTGATAAGATAAGTGATTTAGATAACCTGTTTTCATCCAAATAAAGTAAATTTACATTCATGATTGAGT CCACATGTTCACTAAAATAGCCAAAAACGTATTAAAAAAAACACACACATTTCATAAATTATACACAAGAAGAATGTTGG TATACTTATCTACAGAATTTGTGATGGTGTAGTCATTTTTTGGGCCTGGAGGGCAAGACCCAGAATCAGTTCTCACAACA TTCAGCTGGAAAGTACTTGAAGCTGCACTAAAAGTAAGCCCCTTAATTAGTTGATCATCAAATTCTATGATTATTCTTCA ATTTTGTTTGTCTATTTCATTAACTTGGTTTCTTTTCTCTTGAAATTGAAAACATTCAGACCCCACGAGGAACATTGAAA GGGCTTTTTGATCAACAAAACCGGGGAAGCATGTTCAGAATACCCAAACAACATGTTCATGCCTTAGCCCCTAAGCGAAC CATTTGGCCTTTCGGTGGCCAATCCATGGCACCTTTCAACCTCTTCAGCAAGCGCCCCATTTTCTCCAACGAATATGGCC GTCTCTTTGAAGTTGGTCAGAATCCTTCTGAAGATAAGAGTGGACTTCAAGGACTCAATCTCATGGTCACCTTTGCCAAC ATCACCAATGTAAGAATTCAACCTCTGTATACTTAACCATTACTTCTAACATTTTATCTACGATGTTCACAAATTAAAAT GTTTCTGTGTAAATTAATTTTAACACATAATGACATACATGTCACATGTAAAACATGGTTTATGGGTAGGTAGACACGGT CAAGTGGTAAGAGCTAGGGAACATAAGGGTTGGGTATGATAGGGTTGGGTAGGATGAAGGGTGAATCCTGAGGAGGAACT AATTTACTAATATTACTAACACTTATTATTTGCTTATAAAAAACTGCCCGTTATAACTCTATGTTAATGCATGATCCCAT TATAACATTATGTTGATGCATGATGCTTAGGGGTGTATGAGTACTCTTTTCTACAACACACATTCAACACCAATAGCAAT GGTGGTTGAAGGTGAAGGACATTTTGAGATGGCATGCCCACACCTCTCATCAAGGTCTCACTCACAAGAACGAAAGAGTA GCCCCTCATATCAGAAGATCAGTGCAAGATTAAGGCCTGGGACGGTGTTTGTTGTTCCCGCTGGTCACCCCTTTGTGACC ATTGCTTCCAATAAAAGTAACCTCATGATTCTTCGCTTTGAGGTCAATGCTAAAAACAACAAGAAGCTCACTTTTGCAGG TAGTTAATTTGTTCAAACTCTTACAATATTTGAAGTCTCTAATCAATTACAAGTCTCATACTGATTATAGATAGGACCAG ATAGTCCTTATAAATGGTATAGAGCTAACCTTGTCTTGATTTGTGTAATAGGGAAGGGGAACATTGTGAGTGCATTGGAC AAGACAGCAAAGGAGTTGTCCTTTGACTACCCTGCGGACAAGGTGGACAAGATCTTCGAGAGGGATGAGGAATTCTTTTT CCCTGGCCCTGAAGCTTTCGAGGAGAGCAAGGAGCGTGGTCACTCTGAGGCGTGAGAAGTAGTGAATATGGTTGTTGAAG ATGAGGATGTGTGTGTAGTTTTGAGTTTTCTATTTGTGCATGATGTAAATTAGATGGAGTTTGTGTGTGTATACGAGGAT GATGTAAAATGAAATAAAACTGCCACCGTTTGCTATCTTTTGTGATATATAGCAGAGGTTAATTATCTCAT
CDS sequence (LotjaGi5g1v0169800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCGTGCATGCAACTACCACACCATTTCCCTCCATATAAACAACACACTTTCCCTCATGCATATCAAGAAACAAA ACAAAGCAAAATTAGTTTGTTGTTCATCTCTGAACACACCATGGCCACGAAATCACGGTTTTCTTTAGCTATCTTCTTCT TTCTCTTCTTTCTGCTAGCCGTCACTTCAATCTCTGCCATAAGCACAGAAGAAACAGTGGTAGAAGATCCAGAGCTCAAA ACATGCAAACACCAGTGCGAACAGCAACTGCAGTACTGCAAGAGTGACAAACGAATTTGCAAGCAAAGGTGTGAAGGGTA TCATGAAATGAAGAAAGAACGAGAGAGGCAAATTGAAGAGGAAACTCGTGAGAGGAAAGAGCATGAGATGGAGGAAAAGA GTAAACATCATCATCATAGTCAAGAAGAAGAGGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGGAGGAGAA GAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAGAATCCTTTTGT TTTTGAAGATAAAGATTTTGACACTAGATTCGATACAGAGGATGGTAAAATCTGGGTTCTGCAGAAGTTCAGTAAGAAAT CCAAGCTTCTTCGAGGCATTGAGAATTTTCGCTTGTCCATTTTGGAAGCTAGAGGACACACTTTCATTTCTCCACGCCAC TTTGATTCTGAGGCTGTTCTCTTCAACGTGAAGGGGCGAGCTATAATTGGGTTGGTGGTTGAAGACAAAACAGAGAGATT CAACATGGAACCTGGAGACATCATGAGAATACCAGCAGGGACCCCTGTCTACATGGTTAACAGAGATGAGAATGAGAGGC TTTTCATTGCCACTTTCCATATACCAGTTTCTACTCCTGGAAATTATGAGGTTAATCACAACTTCTAA
Protein sequence (LotjaGi5g1v0169800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSCMQLPHHFPPYKQHTFPHAYQETKQSKISLLFISEHTMATKSRFSLAIFFFLFFLLAVTSISAISTEETVVEDPELK TCKHQCEQQLQYCKSDKRICKQRCEGYHEMKKERERQIEEETRERKEHEMEEKSKHHHHSQEEEEGEEEGEEEEEEEGGE EEEEEEGEEEEEEEEEEEEEEDENPFVFEDKDFDTRFDTEDGKIWVLQKFSKKSKLLRGIENFRLSILEARGHTFISPRH FDSEAVLFNVKGRAIIGLVVEDKTERFNMEPGDIMRIPAGTPVYMVNRDENERLFIATFHIPVSTPGNYEVNHNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 46 | 46 | - | – | |
PANTHER | 42 | 311 | 270 | 1.6E-73 | – | |
PANTHER | 42 | 311 | 270 | 1.6E-73 | – | |
TMHMM | 47 | 69 | 23 | - | – | |
Phobius | 47 | 67 | 21 | - | – | |
Phobius | 68 | 315 | 248 | - | – | |
Coils | 104 | 131 | 28 | - | – | |
MobiDBLite | 110 | 144 | 35 | - | – | |
MobiDBLite | 110 | 190 | 81 | - | – | |
MobiDBLite | 145 | 188 | 44 | - | – | |
Coils | 151 | 184 | 34 | - | – | |
Gene3D | 174 | 314 | 141 | 5.9E-50 | ||
SUPERFAMILY | 183 | 313 | 131 | 3.85E-28 | ||
Pfam | 237 | 300 | 64 | 7.6E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi5g1v0169800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…