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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0169800 |
| Transcript ID | LotjaGi5g1v0169800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|Q04672|SBP_SOYBN Sucrose-binding protein; TrEMBL-Plants: tr|I1JF86|I1JF86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0169800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:43466939..43471603) extracted from Lotus japonicus Gifu genome v1.2.
CTTATTAGTGTGTTGGATACCGTCAACAAATTTTCCACTGAGTGATACACACTGTCGTTCTACCTGGCAGCCATTGCTGA TTTTGGTGACACGTATTTTCCACATGTCCTCGTGCATGCAACTACCACACCATTTCCCTCCATATAAACAACACACTTTC CCTCATGCATATCAAGAAACAAAACAAAGCAAAATTAGTTTGTTGTTCATCTCTGAACACACCATGGCCACGAAATCACG GTTTTCTTTAGCTATCTTCTTCTTTCTCTTCTTTCTGCTAGCCGTCACTTCAATCTCTGCCATAAGCACAGAAGAAACAG TGGTAGAAGATCCAGAGCTCAAAACATGCAAACACCAGTGCGAACAGCAACTGCAGTACTGCAAGAGTGACAAACGAATT TGCAAGCAAAGGTGTGAAGGGTATCATGAAATGAAGAAAGAACGAGAGAGGCAAATTGAAGAGGAAACTCGTGAGAGGAA AGAGCATGAGATGGAGGAAAAGAGTAAACATCATCATCATAGTCAAGAAGAAGAGGAAGGAGAAGAAGAAGGAGAAGAAG AAGAAGAAGAAGAAGGAGGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAAGATGAGAATCCTTTTGTTTTTGAAGATAAAGATTTTGACACTAGATTCGATACAGAGGATGGTAAAATCTGGGT TCTGCAGAAGTTCAGTAAGAAATCCAAGCTTCTTCGAGGCATTGAGAATTTTCGCTTGTCCATTTTGGAAGCTAGAGGAC ACACTTTCATTTCTCCACGCCACTTTGATTCTGAGGCTGTTCTCTTCAACGTGAAGGGTATGATATGAAGTTACCAAAAT CTACTTTTTTATGGTTATTCACAGTTACTATTATTGTTTAATGGAAAATTTCTGAATTTTTTTTACTAGGGCGAGCTATA ATTGGGTTGGTGGTTGAAGACAAAACAGAGAGATTCAACATGGAACCTGGAGACATCATGAGAATACCAGCAGGGACCCC TGTCTACATGGTTAACAGAGATGAGAATGAGAGGCTTTTCATTGCCACTTTCCATATACCAGTTTCTACTCCTGGAAATT ATGAGGTTAATCACAACTTCTAATTGCATACGTACAGTGGCGGAACCAGAAATTTTGTGAAGCCTGGGCAATATTTTTAA CCGCAATGGATGGTGGCTGCGGGTGGCGACCAATCAGCAGGCGGCAGCCGGCGAACGGGCGAAGGAAGGAGGAGAAAGTG GGTTCAGGGCTTCAGGCCAAACGCGTATGTGTGCGGCTAAAGAATTGAGTGTGTGTTTGGATTAACGTTAGCATGATTAG ATCTGACCAAAATTGGATTTGGTAAACGTGAGACGTGAGTTTGAGTGATTTAATTTATGCTTAGATACATAGGTGAACCT AATATGCACCAGTTTTAGGTGGTGTAATTTTACACCACCTACTTTAACTGGGTATAGCAGGTCAACAAATTATTTTTTTT AAGAAAAAATATAATTAAAAATTTATCATATATTAAATATCTTTAAAAAAAGATGCCTTGACCTGTTATAGCAGGTTAAA AAAAGTGGTCTAAAATTAGACCACTTTAAAAGTGGTCCACATTAGGGGTCACCTAGATACATTGTGAGAAACGAGATTCT TGTAAGAGAATTTTGTTTAGATATTAGAATTGATTTTGAGTGTGTAATGACGAAAATTGATACAAATATTATAATTAATA TACATGCTTTGGAGAAATTATTTTTAATGAGAAATAAACAGATTATATAATTATTAAATATTGTAAATAAACGTTTTTTT TGAAATGTATTGTAAATAAACGTTTGTTGGTTTGTTTTGAGTTTTAAAAAAAATTATTGTAAACAAACACAAAGAAAAAC AAACACAATGAAAAATAAACATGATGACAGTTGTACCCCTCCACTAAGCTCCAACAATCCCAGCCACAAGTATCTTATCT TTTTATTCATTGCAAAGCAGTCTAACCACCTCTGTCCTTCCCCTGTGTTCGTTGTTCCTGTTTTTTCCACTCTTTTCTCA ATTATGTTTTTTCTCTTTTCTTCTCCTTTGAACCTGAATCTGTATCTGTTCTTTTTAGCACTTCTTGTGCATTATATATA TAATATTATTGGCTTACCCAAAAAAAATCCTTCCATACTCCACATCTGTCTTTTTCAACAAACCACAATTCCCTTTAAAA AAAACACCCACAATTCACCTCCTTCTCTCTTTTTTTTCTTTCTGCAACAAACAACGACAATTAGCTTTCTTGATGCTGGA ATTTCTACCTAAAGTATTGTGCATGCAGAGAACAAAAGTGGATGAGAGTTGCAGAGTGAAAGAACAAGAATGCAGAAGCT AAGATTTCCAGCTTCGGTCAGATCCGATTTTGGGAGAGAAAATCGATTTTGAAGAAACCACCCACAGGCCGCTACCCCTG CTTCACTCACCCTCACCCACATATACAACCCTCTTCACAGTTCACTCACCCTCATCCTCCTTCACCCAATCACCCTGCTT CACCTTCACCCAATTTTGCCCTTTCTCTCTTCTTTTTTTGGACCCAAATGCTTATCTGGTCCAAAGAAAAAAAAAATTAT TTCCTTTGAGCCTGGGCAAGGGCCCAGGCAAGCCAGGTGGTGAATCCGCCCCTGCATACATAACAAACCATTTATTTACA ATTACAAACTAAAATTCAATCAGGGTTTTTGTTGTCTCAATCACTAAATTTTACTAAATCTTAGCTAAAATAACTTTAGA TGGAATAATATTTTAACATGCCCTCAGGCCTCAACAACCTAGCTCAGACATGTCACATAGTCAAAATATTATTGGACCAC GTTGTTCAATACTCACATGTCTGAATTTGAGTAATACTTAGCTTGAGTGATAAGATAAGTGATTTAGATAACCTGTTTTC ATCCAAATAAAGTAAATTTACATTCATGATTGAGTCCACATGTTCACTAAAATAGCCAAAAACGTATTAAAAAAAACACA CACATTTCATAAATTATACACAAGAAGAATGTTGGTATACTTATCTACAGAATTTGTGATGGTGTAGTCATTTTTTGGGC CTGGAGGGCAAGACCCAGAATCAGTTCTCACAACATTCAGCTGGAAAGTACTTGAAGCTGCACTAAAAGTAAGCCCCTTA ATTAGTTGATCATCAAATTCTATGATTATTCTTCAATTTTGTTTGTCTATTTCATTAACTTGGTTTCTTTTCTCTTGAAA TTGAAAACATTCAGACCCCACGAGGAACATTGAAAGGGCTTTTTGATCAACAAAACCGGGGAAGCATGTTCAGAATACCC AAACAACATGTTCATGCCTTAGCCCCTAAGCGAACCATTTGGCCTTTCGGTGGCCAATCCATGGCACCTTTCAACCTCTT CAGCAAGCGCCCCATTTTCTCCAACGAATATGGCCGTCTCTTTGAAGTTGGTCAGAATCCTTCTGAAGATAAGAGTGGAC TTCAAGGACTCAATCTCATGGTCACCTTTGCCAACATCACCAATGTAAGAATTCAACCTCTGTATACTTAACCATTACTT CTAACATTTTATCTACGATGTTCACAAATTAAAATGTTTCTGTGTAAATTAATTTTAACACATAATGACATACATGTCAC ATGTAAAACATGGTTTATGGGTAGGTAGACACGGTCAAGTGGTAAGAGCTAGGGAACATAAGGGTTGGGTATGATAGGGT TGGGTAGGATGAAGGGTGAATCCTGAGGAGGAACTAATTTACTAATATTACTAACACTTATTATTTGCTTATAAAAAACT GCCCGTTATAACTCTATGTTAATGCATGATCCCATTATAACATTATGTTGATGCATGATGCTTAGGGGTGTATGAGTACT CTTTTCTACAACACACATTCAACACCAATAGCAATGGTGGTTGAAGGTGAAGGACATTTTGAGATGGCATGCCCACACCT CTCATCAAGGTCTCACTCACAAGAACGAAAGAGTAGCCCCTCATATCAGAAGATCAGTGCAAGATTAAGGCCTGGGACGG TGTTTGTTGTTCCCGCTGGTCACCCCTTTGTGACCATTGCTTCCAATAAAAGTAACCTCATGATTCTTCGCTTTGAGGTC AATGCTAAAAACAACAAGAAGCTCACTTTTGCAGGTAGTTAATTTGTTCAAACTCTTACAATATTTGAAGTCTCTAATCA ATTACAAGTCTCATACTGATTATAGATAGGACCAGATAGTCCTTATAAATGGTATAGAGCTAACCTTGTCTTGATTTGTG TAATAGGGAAGGGGAACATTGTGAGTGCATTGGACAAGACAGCAAAGGAGTTGTCCTTTGACTACCCTGCGGACAAGGTG GACAAGATCTTCGAGAGGGATGAGGAATTCTTTTTCCCTGGCCCTGAAGCTTTCGAGGAGAGCAAGGAGCGTGGTCACTC TGAGGCGTGAGAAGTAGTGAATATGGTTGTTGAAGATGAGGATGTGTGTGTAGTTTTGAGTTTTCTATTTGTGCATGATG TAAATTAGATGGAGTTTGTGTGTGTATACGAGGATGATGTAAAATGAAATAAAACTGCCACCGTTTGCTATCTTTTGTGA TATATAGCAGAGGTTAATTATCTCA
CDS sequence (LotjaGi5g1v0169800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCGTGCATGCAACTACCACACCATTTCCCTCCATATAAACAACACACTTTCCCTCATGCATATCAAGAAACAAA ACAAAGCAAAATTAGTTTGTTGTTCATCTCTGAACACACCATGGCCACGAAATCACGGTTTTCTTTAGCTATCTTCTTCT TTCTCTTCTTTCTGCTAGCCGTCACTTCAATCTCTGCCATAAGCACAGAAGAAACAGTGGTAGAAGATCCAGAGCTCAAA ACATGCAAACACCAGTGCGAACAGCAACTGCAGTACTGCAAGAGTGACAAACGAATTTGCAAGCAAAGGTGTGAAGGGTA TCATGAAATGAAGAAAGAACGAGAGAGGCAAATTGAAGAGGAAACTCGTGAGAGGAAAGAGCATGAGATGGAGGAAAAGA GTAAACATCATCATCATAGTCAAGAAGAAGAGGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGGAGGAGAA GAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAGAATCCTTTTGT TTTTGAAGATAAAGATTTTGACACTAGATTCGATACAGAGGATGGTAAAATCTGGGTTCTGCAGAAGTTCAGTAAGAAAT CCAAGCTTCTTCGAGGCATTGAGAATTTTCGCTTGTCCATTTTGGAAGCTAGAGGACACACTTTCATTTCTCCACGCCAC TTTGATTCTGAGGCTGTTCTCTTCAACGTGAAGGGGCGAGCTATAATTGGGTTGGTGGTTGAAGACAAAACAGAGAGATT CAACATGGAACCTGGAGACATCATGAGAATACCAGCAGGGACCCCTGTCTACATGGTTAACAGAGATGAGAATGAGAGGC TTTTCATTGCCACTTTCCATATACCAGTTTCTACTCCTGGAAATTATGAGGTTAATCACAACTTCTAA
Protein sequence (LotjaGi5g1v0169800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSCMQLPHHFPPYKQHTFPHAYQETKQSKISLLFISEHTMATKSRFSLAIFFFLFFLLAVTSISAISTEETVVEDPELK TCKHQCEQQLQYCKSDKRICKQRCEGYHEMKKERERQIEEETRERKEHEMEEKSKHHHHSQEEEEGEEEGEEEEEEEGGE EEEEEEGEEEEEEEEEEEEEEDENPFVFEDKDFDTRFDTEDGKIWVLQKFSKKSKLLRGIENFRLSILEARGHTFISPRH FDSEAVLFNVKGRAIIGLVVEDKTERFNMEPGDIMRIPAGTPVYMVNRDENERLFIATFHIPVSTPGNYEVNHNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 46 | 46 | - | – | |
| PANTHER | 42 | 311 | 270 | 1.6E-73 | – | |
| PANTHER | 42 | 311 | 270 | 1.6E-73 | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Phobius | 47 | 67 | 21 | - | – | |
| Phobius | 68 | 315 | 248 | - | – | |
| Coils | 104 | 131 | 28 | - | – | |
| MobiDBLite | 110 | 144 | 35 | - | – | |
| MobiDBLite | 110 | 190 | 81 | - | – | |
| MobiDBLite | 145 | 188 | 44 | - | – | |
| Coils | 151 | 184 | 34 | - | – | |
| Gene3D | 174 | 314 | 141 | 5.9E-50 | ||
| SUPERFAMILY | 183 | 313 | 131 | 3.85E-28 | ||
| Pfam | 237 | 300 | 64 | 7.6E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi5g1v0169800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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