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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0205600 |
| Transcript ID | LotjaGi5g1v0205600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ammonium transporter; TAIR: AT1G64780.1 ammonium transporter 1;2; Swiss-Prot: sp|O04161|AMT12_SOLLC Ammonium transporter 1 member 2; TrEMBL-Plants: tr|Q7Y1B9|Q7Y1B9_LOTJA Ammonium transporter; Found in the gene: LotjaGi5g1v0205600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50792433..50797139) extracted from Lotus japonicus Gifu genome v1.2.
GTCTAAGAGGAGCAAACTATAGTTGGAACCTCAAATCATATAGGCAACAACAATCGTATGCCCTTATAGGTAGTTTATTT AATTTGACGATTCTTTCTGCGGTTCCGAATACCACGAAAATTAAATTAGCTGAGATTCAAAGAGATAAACATATAAGCAA GTGGTCCTTACTCTCTAGCTAGCTACAATGTTATAAAAATGGGTGATATCCCTTCCACTTCCACCCCAACCACATTCCTT CAATCCACTCTGAACCAGTAGTACTGTTATTAGTTTCTGTCTGCACACTCACAAGTCACAACACTCCCCGACACACACAA CATGGCTTCTCTCTCTTGCTCAGCCACAGACCTCGCTCCACTCTTAACCGCCACAACCAACGCAACCGCAACCGCCGCCG CCACCTACCTCTGCAACCAGCTCGATACAATCTCCAGGAAGCTCAGCGACACCACCTATGCCGTTGACAACACCTACCTC CTCTTCTCAGCTTATCTAGTCTTCGCCATGCAGCTCGGTTTTGCCATGCTCTGCGCCGGCTCCGTCCGAGCCAAAAACAC CATGAACATCATGCTAACCAATGTTCTTGATGCAGCAGCCGGCGGCCTATCCTACTACCTCTTCGGCTTCGCGTTCGCCT TCGGAGCCCCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAACACTACCCTTCGCCCACCTACGACTACAGC TTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCTGCCGGAATCACCAGCGGCTCCATCGCCGAGAGGACACAATTCGT CGCCTACCTCATCTACTCCTCTTTCCTAACCGGCTTTGTCTACCCGGTCGTCTCGCACTGGCTCTGGTCCTCGGACGGCT GGGCCAGCCCCACCCGCACCACTGGCAGCTTACTATTCGGATCCGGCGCGATTGATTTCGCTGGATCCGGAGTAGTCCAC ATGGTCGGTGGCATAGCAGGACTATGGGGCGCGTTCATCGAAGGCCCTAGAATCGGCCGGTTCGACCGAACCGGCCGATC CGTAGCCTTACGTGGACACAGTGCGTCCCTAGTTGTCCTCGGTTCGTTTCTACTATGGTTCGGTTGGTACGGGTTCAACC CCGGTTCATTTCTCACCATAGCAAAAGCCTACGGTAACAACGGCGAAAACGGTAATTACTACGGTCAGTGGAGCGCGATA GGGAGAACAGCGGTCACAACCACATTGGCTGGATGCACTGCGGCACTCACCACGCTTTTCAGCAAACGGTTATTGGAGGG CCACTGGAAAGTGCTTGACGTGTGTAACGGCCTGCTCGGCGGTTTCGCCGCCATCACCTCCGGTTGCTCCGTCGTCGAGC CGTGGCCGGCGATTGTCTGCGGTTTTGTGGCAGCGTGGGTGCTGATCGGGCTCAATTTGGTTGCGGCGAAAATGAAGTAC GACGATCCTCTGGAGGCGGCGCAGCTTCACGGCGGGTGCGGCGCGTGGGGGGTTTTATTCACGGGGCTGTTTGCGAAGGG GGAGTACGTGGCGGAGGTTTACGGCAGCGCTGGGAGGCCGTACGGGTTGTTAATGGGTGGCGGAGGGAAGTTGCTGGCGG CGCAGGTGATTGAGATATTGGTGGTGTGTGGGTGGGTTACGGCGACGATGGGGCCGTTGTTCTATGGGCTTCATAAGATG AAACTTTTGAGGATTTCTGAAGATGATGAGACTGCGGGGATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCTTACCA TGATGAAGATGATGTGTCCACCAAGAGAGGGGTCATGATGAGTAGGATTGGGCCTGGTAGTAGTTCTCCCTCCACCATGA ACACGCCGGCGGCGAGCGCCGCCGCCAATGACTGTTGACGCCGGTTGCTGCTTCTTGAACATGGGTGCATATATGGTAGG GGTGAATATTCTATGGGAAATTATTAATTTTGTGATAGAGAAATAGGTATTGAATTTGTCTTTTGCTTGATTTGTTGATG TAAAAGAAAGTTATTATGAGAATGCATGGGGTGAATGGTGATGAAGTGATGTACAAGTGTATATGATCTCATGGTAGGTG ATGTGCAGTAAATAATATTTTTATAGGTTTGTGGTTTGGGTTTTGTTTTGAAGTTTGAAATGAGGGTGTACTCCCTACAA TTGTAAGAAATTAGTGTCCTCCCATTCTATGTTATTGAATGTTTTTTTTATAGGCATGTTCTATTGAATGTAATTAAGGT TGTTTGTGACTTGAACGAATCTAAATTGAATCATAATCATAATAATTAATAATACCTGAATGTTTTCCATCAATTTTCAT TTTCATGAGAATTCCACTCTTCCTTGTTATAGTGGAATTAAGTTCCATTCGCATTTTATCTCTTCGAGAACATTCGACGA TGAAACTTGAGTAAAGAGATAGAAATAAAATAAGAGAAAATAAGGTATGTGAATGGTAATATGATTGAAAGAGTAGAAAA AAAAATAGTTAAAAAGTGGATGATAATGAAATAAATGTGTAAAGGAATCATATTTCAATATTACAGTTTTGAGGTTGTCT TATATATGTTCTTCCTTGACTTCCTTGTATTCATGCTCACCTCATAATGTTTGGTAAACCACCAATGGGATAGTGAAAAG AGAAACAATAGTTATGATACTTGAACCACCAACCGTACATATATTCTTTAAACATCTCATTTTTCCCTCTATTTCTAATT TCTTATCACATCTATTACTCTCTTCTTCTCTTATTTTCTCTTTATGGATGTCTATACCTTTTGGTGGTCTATAAAGCATT TTCCAACATTAATTGAGTAGCATCCAAAGTATGGAAGATGGTCTATAAAGCATTTTCCAACATTAATTGAGTAGCATCCA AAGTATGGAAGAAGCTGAAGAGGAGCATCGCGTGTGTATTTATAGCAACCCGTGAATTCACCAGCAATGAGAAAATTATG CAACCACAATAATAGCTGAGAAAATTGGAAAATGTTGGGTAGACAACAGTGGCGAATCCAGGACTCCGGGGTCAGGGGTT CAAAATTTTCAAATTAACACATTGGTAAAAATATAATTAAATTGGGGATTGAAAAGACATAAATTGAAAGTGAACACTAA GCACAAGGCATTGCATACTCAACCCACAAGTTCTTCCCTCTGATCTCAACACCAATCTTCTTCTTTTTTTGACATGAAAC AAAGCATTATATTAATTAGGAAGGGACATAATGTCCATTAGTACAATCTGTTGAATACAAGGTGGGGTTATACCAACCCA AATCTTATCAGTATGCACAAGAGCAAAACGAGAAAGCTCATGTGCAGCACAATTAGCAGCTCTACCCACATGAATCAAAG AAACTTGAGCAAACTGGCACTATAATGCAACAATATCTTGTAGAATAAAACTAAGATAAGATCCATGACTCCTGCACTGT ACCACAGCATCTACTACACCCTTGCAATCTGATTCATTATGAGGAACCAATCTAATGCATATTGCAGATTGTTGTTTATT TGATACCATGCTTCTCCCAAATTAGTTCTCATATATGATACCAAATTAAATAATACTGACAAACCACAAGATCCAATACA TCATGATCCAACAACATACAATTATCCGGATGTGTTCAATCCTTTAAGATTTCATGTAAGTCTACCCAAGTGATCTACTA TGTAACATTATAATTGGTTAAGGAAAATAGAAGCTAAATTTTGATATTTTAATATTCACAAACCACAAGATTCCGCTTAA GCCCTTAATAGAACAGAGGAAATCAATTACACATTTAGATACCTCAATTCCCATAGACAAATTCCCACACAGAACCACAA AATAGCACAAAACCCCACTGTAATGCCATGAGAAAACGTGTGGCAACAGCAGGCTAAAAACGAGCACACAGACAGCAGAA AAAGATCATACAACATCCAAAACTCAAGATCAAAGTTACTCAATACAGCTTCTTGGATTCGTGCTCACCAATTACAAGTG GGTATTTTTATTGTGTGTGTGACTTTGCTATAAGCTATAAACCAGTTAGTAATTAGTAATTAAGGGGAAAATTTGGGGAA AATGACAAATGGGTACCTCACCTTAGCAATCAAGGGTGCGTGCGTGGTAGACTCACTCTTCAGAGAAAGGAGAAGCCACG ATAGAGAGGCAGAGGCGTGCGGGTCTTCACTCTTCAATCTTGTCGTCAGCCTTGGGTGATGGGTCTGGGAGAAGGAGAAC TGGCAGGGGCGGAGGCGCGGCTGGGGCTTGGGTTGAGCGGCGCAGGGTGTGCGTGGTGGATTGGTGGTGGCGTGGTGGTG GCCGCCGGTGGTGCGTGTGTGTGTCCGCTTGACCTAGGGTAGTGAGAGTCGAGAGAAGGAGGGTGAGGGACTGTGTAGTG TGCGTGAGTGTGAGAGAGAGGGTCTTTGGTGCAAATTTAAATTTTCAGGGGGTTCAAAAAATAATTATACAGGGGGTAAG TGAGAATTTTTTTTCCAGGGGGTTCGAGTAAACAGCCATTTTGGTCCTTGGTTGTGTATAGCTGTGACGGAATGGTCCTC AGCTTTTAAAAATGGTCGTTTTTAATCCTTGAATGTGTTGACGTCGTTCAAGTTAGTCATTTTTTCAATTTTCCGTTGGT CCCTGAGACGGAAAATGTCAAATGTCACGTTTTTTTACACGTTGGCATCCTACGTGGCTCTCCAATG
CDS sequence (LotjaGi5g1v0205600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTCTCTCTTGCTCAGCCACAGACCTCGCTCCACTCTTAACCGCCACAACCAACGCAACCGCAACCGCCGCCGC CACCTACCTCTGCAACCAGCTCGATACAATCTCCAGGAAGCTCAGCGACACCACCTATGCCGTTGACAACACCTACCTCC TCTTCTCAGCTTATCTAGTCTTCGCCATGCAGCTCGGTTTTGCCATGCTCTGCGCCGGCTCCGTCCGAGCCAAAAACACC ATGAACATCATGCTAACCAATGTTCTTGATGCAGCAGCCGGCGGCCTATCCTACTACCTCTTCGGCTTCGCGTTCGCCTT CGGAGCCCCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAACACTACCCTTCGCCCACCTACGACTACAGCT TCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCTGCCGGAATCACCAGCGGCTCCATCGCCGAGAGGACACAATTCGTC GCCTACCTCATCTACTCCTCTTTCCTAACCGGCTTTGTCTACCCGGTCGTCTCGCACTGGCTCTGGTCCTCGGACGGCTG GGCCAGCCCCACCCGCACCACTGGCAGCTTACTATTCGGATCCGGCGCGATTGATTTCGCTGGATCCGGAGTAGTCCACA TGGTCGGTGGCATAGCAGGACTATGGGGCGCGTTCATCGAAGGCCCTAGAATCGGCCGGTTCGACCGAACCGGCCGATCC GTAGCCTTACGTGGACACAGTGCGTCCCTAGTTGTCCTCGGTTCGTTTCTACTATGGTTCGGTTGGTACGGGTTCAACCC CGGTTCATTTCTCACCATAGCAAAAGCCTACGGTAACAACGGCGAAAACGGTAATTACTACGGTCAGTGGAGCGCGATAG GGAGAACAGCGGTCACAACCACATTGGCTGGATGCACTGCGGCACTCACCACGCTTTTCAGCAAACGGTTATTGGAGGGC CACTGGAAAGTGCTTGACGTGTGTAACGGCCTGCTCGGCGGTTTCGCCGCCATCACCTCCGGTTGCTCCGTCGTCGAGCC GTGGCCGGCGATTGTCTGCGGTTTTGTGGCAGCGTGGGTGCTGATCGGGCTCAATTTGGTTGCGGCGAAAATGAAGTACG ACGATCCTCTGGAGGCGGCGCAGCTTCACGGCGGGTGCGGCGCGTGGGGGGTTTTATTCACGGGGCTGTTTGCGAAGGGG GAGTACGTGGCGGAGGTTTACGGCAGCGCTGGGAGGCCGTACGGGTTGTTAATGGGTGGCGGAGGGAAGTTGCTGGCGGC GCAGGTGATTGAGATATTGGTGGTGTGTGGGTGGGTTACGGCGACGATGGGGCCGTTGTTCTATGGGCTTCATAAGATGA AACTTTTGAGGATTTCTGAAGATGATGAGACTGCGGGGATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCTTACCAT GATGAAGATGATGTGTCCACCAAGAGAGGGGTCATGATGAGTAGGATTGGGCCTGGTAGTAGTTCTCCCTCCACCATGAA CACGCCGGCGGCGAGCGCCGCCGCCAATGACTGTTGA
Protein sequence (LotjaGi5g1v0205600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLSCSATDLAPLLTATTNATATAAATYLCNQLDTISRKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNT MNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLKHYPSPTYDYSFFLYQWAFAIAAAGITSGSIAERTQFV AYLIYSSFLTGFVYPVVSHWLWSSDGWASPTRTTGSLLFGSGAIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRS VALRGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKAYGNNGENGNYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLEG HWKVLDVCNGLLGGFAAITSGCSVVEPWPAIVCGFVAAWVLIGLNLVAAKMKYDDPLEAAQLHGGCGAWGVLFTGLFAKG EYVAEVYGSAGRPYGLLMGGGGKLLAAQVIEILVVCGWVTATMGPLFYGLHKMKLLRISEDDETAGMDLTRHGGFAYAYH DEDDVSTKRGVMMSRIGPGSSSPSTMNTPAASAAANDC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 2 | 504 | 503 | 3.5E-295 | – | |
| PANTHER | 2 | 504 | 503 | 3.5E-295 | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 27 | 12 | - | – | |
| Gene3D | 23 | 495 | 473 | 2.5E-142 | ||
| Phobius | 28 | 50 | 23 | - | – | |
| SUPERFAMILY | 46 | 458 | 413 | 8.5E-101 | – | |
| TIGRFAM | 49 | 477 | 429 | 2.4E-143 | ||
| Phobius | 51 | 75 | 25 | - | – | |
| Pfam | 52 | 477 | 426 | 8.3E-136 | ||
| TMHMM | 53 | 75 | 23 | - | – | |
| Phobius | 76 | 95 | 20 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| Phobius | 96 | 115 | 20 | - | – | |
| Phobius | 116 | 134 | 19 | - | – | |
| TMHMM | 132 | 154 | 23 | - | – | |
| Phobius | 135 | 153 | 19 | - | – | |
| Phobius | 154 | 159 | 6 | - | – | |
| Phobius | 160 | 182 | 23 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 183 | 201 | 19 | - | – | |
| Phobius | 202 | 226 | 25 | - | – | |
| TMHMM | 203 | 225 | 23 | - | – | |
| ProSitePatterns | 205 | 230 | 26 | - | ||
| Phobius | 227 | 246 | 20 | - | – | |
| TMHMM | 246 | 265 | 20 | - | – | |
| Phobius | 247 | 265 | 19 | - | – | |
| Phobius | 266 | 291 | 26 | - | – | |
| Phobius | 292 | 312 | 21 | - | – | |
| Phobius | 313 | 323 | 11 | - | – | |
| Phobius | 324 | 341 | 18 | - | – | |
| Phobius | 342 | 346 | 5 | - | – | |
| TMHMM | 347 | 369 | 23 | - | – | |
| Phobius | 347 | 368 | 22 | - | – | |
| Phobius | 369 | 379 | 11 | - | – | |
| Phobius | 380 | 398 | 19 | - | – | |
| TMHMM | 382 | 404 | 23 | - | – | |
| Phobius | 399 | 424 | 26 | - | – | |
| Phobius | 425 | 448 | 24 | - | – | |
| TMHMM | 428 | 450 | 23 | - | – | |
| Phobius | 449 | 518 | 70 | - | – | |
| MobiDBLite | 497 | 518 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of LotjaGi5g1v0205600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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