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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0208700 |
| Transcript ID | LotjaGi5g1v0208700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell division cycle 5-like protein; TAIR: AT1G09770.1 cell division cycle 5; Swiss-Prot: sp|P92948|CDC5L_ARATH Cell division cycle 5-like protein; TrEMBL-Plants: tr|A0A0L9VKK7|A0A0L9VKK7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0208700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51069955..51074410) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTCAAAGCTGCTGTGTATCTGTGATGAAA TATGGCAAGAATCAGTGGGCTCGTATCTCTTCCCTCCTCGTTCGCAAATCTGCTAAGCAATGCAAGGCTCGTTGGTATGA GTGGCTTGATCCTTCCATCAAAAAGGTCTCCATTCATTCTATGATTGCTTCTTTGTTGTCTGTTGTTATGTTTTAGCCTC ACTCTTTAATAACAATGGTAGTAGCACTAGTGATTCTTTAATTTATCCATTTTGTTAGTTGTTGGTGCATGTTTGGAAAT CTTTTAGAATTGATTCTAAAGCCAAAACCTTTAGCTTCTGGGTGTCAGAATTGATTTTGAGAAAAGAGAAATCGATCTAA ACATGCTACAAATACCCTTATTGAAGCTGTTGTTTCTTTAATCATGAATTCTTTTTTAAGGCATTTTTCCAAGGTTTTAA ATTGAGGTAATGGTCGCTGTCGTGTCACGATTGCGTTGCGGGAAAAATTGTGAACCAATGTGGCTTTCGCCTCCAAAATG TTGACGTCACAACCGAAATCACGGTTGCGGGCCTTGATTTAAAACCTTGCATTTTTCCTTCACGAGCATTTATGTTCCTT ACTTTTCTTTCTTTATTACTCAATGATTCTGTATCTTGCCATTCCTCATAAGGAGTGATGATGTTTCTTGTATGCTGACT GAGTGGACTAGAGAAGAGGATGAGAAGCTTCTTCATCTTGCTAAGCTTATGCCCACCCAATGGAGAACAATAGCGCCAAT TGTAGGCCGCACCCCTTCCCAATGCCTTGAGCGATACGAGAAGCTTCTTGATGCAGCCTGTGTGAAGGATGACAATTATG AACCCGGTGATGATCCTCGGAAATTGTGTCCTGGAGAGATTGATCCGAATCCGGAGTCAAAACCTGCACGCCCGGATCCT GTTGATATGGATGAGGATGAGAAGGAGATGCTTTCTGAAGCGCGAGCCCGATTAGCCAACACAAAGGGAAAGAAGGCAAA AAGGAAGGTTAGGGAAAAACAACTTGAGGAAGCCCGGAGGCTCGCATCTTTACAAAAGAAGAGAGAGCTGAAAGCGGTTG GAATTGATATCAGGCGCCGGAATAGAAAAAGGAGAGGGATAGACTACAATGCAGAAATTCCATTTGAGAAGAGGCCTCCT CCGGGGTTTTTTGATTTTACAGATGAAGATAGACCGGTGGAACAGCCCAAGTTCCCTACTACAATTGAAGAACTTGAGGG AAAAAGGAGGGTTGACGTCGAGGCACAGTTGAGAAAGCAGGACATTGCAAAAAATAAAATTGCTGAGGGGCAAGATGCGT CGTCTGCTATACTGCATGCCAACAAGCTGAATGACCCAGAAACAGTAAGAAAGAGGTCAAAACTGATGCTTCCGCCACCC CAGATCTCTGATCAGAAATTGGATGAAATTGCAAAGCTGGGTTACGCCGGTGATCTTGCAGGGAATGAGGAACTTGCAGA AGGTAGTGGTGCAACACATGCTCTTCTGGCTAATTATGCACAAACACCTGGCCGAGGAATGACTCCTTTACGAACCCCTC AGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCCAGATTAAGGGAGTCTCAGACACCA TTGTTAGGAGGAGAGAACCCAGAGTTGCACCCTTCAGATTTTTCCGGGGTTACTCCTAAGAAAAATGAGATTCAGACTCC AAATCCGATGCTGACTCCCTCTTGAACTTCTGGAGGTGCCGGTCTCACTCCCAGAATTGGCATGACGCCGACAAGAAGTG AATTTTCTTTAGGCATGGCACCAAAGGGAACTCCTCTTAGAGATGAGCTCCGTATTAATGATGACATGAATACACCTAAC AGTGCTAAACTTGAGCAACAGAGACAGGCTGATCTGAGAAGAAGTTTACGCACTGGTTTAGGAAGCCTTCCACAGCCCAA AAATGAGTACCAGATAGTGATGCAACCAGTTCCAGAAGATGCTGAAGAGCTAGAGGAGAAGATTGAAGAGGATATGTCTG ATAGAATAGCTAGAGAAAAGGCAGAAGAAGAGGCACGACAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGG CAACTTCCTAGGCCTCCTGCTGCATCATTGGAGCTTATTAGATATTCCTTGATGAGAGATGATGGAGACAAGAGTTCCTT TGTTCCACCAACCTCTATGGAGCAAGCGGATGAGTTTATTAGAAGGGAACTTCTTACTTTACTCGAGCATGACAATGCTA AGTATCCACTTGATGACAAAGTGGGTAAGGAGAAAAAGAAACGACCTAAGAATGCGGCAAATGGGTCTGTTGTCCCTCTG ATAGAAGATTTTGAGGAAGATGAGATGCAAGAGGTATGTGTTTACTAATCTATCTGTGCACTCTTTTATTCACTTGATAG TAAGTAGCTTGGTCAACTCTCACCATTAATACACGTGAGTTGATTTCCATTGTGGAGGACACCCTTTCCTTTTTATGCAG ATATTGAGACTATTCCTGCCTTATCCATTTATTACTCAGAAATTTCTTATTTGACAAAATTTATATTCCACCATCCAAAA TAGACACTTCAAGAATCCTCCTACATATTAATGAAATATGAAGAATTTGAATCTGTCAATGTTTTCATCCCTTTATCAAT TTGAACTTTAATCAATGCATTAGTTACAATTCTTTCCATCAGGAGATTTCCTGGTACTCCGGTTTACCGTTCCTTTCTTG ATAGTTATTCTATCAATAATTTTCTATTTTTGTCTATGCGAGTAGGTAATGGTTTAACCAAAGGTGTAGTTTTTGAAAAT CAAATACTATGCAATCTTAGTGAATATTTTCAAACTAGCCATTGTAAACCGTCAGTCTTGTATGGTTTTACCAAGTTGTG CAAGTTTATCCTTTTTCAGTTTTAAAGGTTTGATACATTTTGTTGTTGTTTATGACTTTATGTCGTTTCCCTTATGAATT GATTCTCCCGTGTCATGGGGGTATGAAAAGAATCTGTGAATGGGAATGGTATACTCACTTCTCAATTATAACCATGGCAG TCAAAATCCCAATTTTAGTCGCATAATCCCACTATAATGCGATTACTGTGAACCTGGGCTATGAAAATCAGTTGCATAAT CCTTTTCTGGCTAAATTGAAACTTAATGTGATTAAGCACGGTCCATGTGACGTGGGCTTGACCCGTTTCCTAAACGTGAC CCAGTTCGCAAAACCCTAATTATTTCGAGCAGCCAGGGCCCCCTTCACTCCCTCACTCACATTCGTGAGCCCTTTCTCTT CCCCATTGCACCGACGGCGATGCTTTGACACCATCAACGAGGCTCCTCTACCGGTGACTAAGTTCTGTTCATCGTCTCTT CTATGACTTATGAACTATAAGTGCAACTTTATTCAAGTGTTTCAAGTTATTTAAAGCATTTTTTGTTTGTTTATTATGCT ATTTTAAATGTATATATGCATATGAATTTTGCTAAATCTTACGATTAATCTTAAGATTATGCGATTTACGACGAACACCC CCCCCCCCCTCTTTCCTGATTAAAGGCATAATCTCGATTTTGACTATATTAGCTATAACCCTTCATCTAATTAAGTTGGA CTGGGTGTGTTTTTCTCTGGTGTTCCTTTCTTCGTGTAGTCAGAGACTTCTTGATTCAGATGTAATTGTCTAAGTTCTGT CCTAGCAGTTTTTCTTAATGTCGTATATTATCTATACATATATATAATATTTAATTATTTATGTTCATTTGTCTTTATGA TAATGCAAAGTTTTGTATCTAGTAGCTGCTGATTATCTTAATTCTCATTAATTTTGACGATGATATCATTGTTGATGTCG TCTTACATGTAGGCAGGGTTGGTGATACTTATTCTAAATTCTATATTTAATGTTGTGTTTGGTAGGCTGACAGGTTGATA AAGGAAGAGGCCCGGTATCTTTGTATTGCGATGGGGCATGGAAGTGAACCTCTTGATGAATTTATTGAAGCACATAATAC TTGCCTTAATGATCTTATGTACTTTCCCACTCGTGAAGCCTATGGTCTCTCGAGTGTTGCTGGGAACATGGAAAAGGTAA CATCTTTGCAGCATGAATTTGAGAGTGTGAGAAATAAGTTGGAAGATGGAAAGGTGAAGATAGCACGGCTTGAGAAGAAG GTGATAGTTTTGACACAAGGTTATGAGGTATGTAACTGAATCCTGCCTGCAAAATGCTACGTTTACGTTTCCTGCAGTGC CACAAATTTTAGTTTGTTTGTTAGATGGCGGCTGTGCGCTCTTGTGTAGGTGCTTCCTTATATCAAATTTATTGAGATTT GAGCATCTTTTTTGTTCTTTTTAACAAATTCACTCTACAAAGGTGGTTTGTAATTG
CDS sequence (LotjaGi5g1v0208700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATATGGCAAGAATCAGTGGGCTCGTATCTCTTCCCTCCTCGTTCGCAAATCTGCTAAGCAATGCAAGGCTCGTTG GTATGAGTGGCTTGATCCTTCCATCAAAAAGACTGAGTGGACTAGAGAAGAGGATGAGAAGCTTCTTCATCTTGCTAAGC TTATGCCCACCCAATGGAGAACAATAGCGCCAATTGTAGGCCGCACCCCTTCCCAATGCCTTGAGCGATACGAGAAGCTT CTTGATGCAGCCTGTGTGAAGGATGACAATTATGAACCCGGTGATGATCCTCGGAAATTGTGTCCTGGAGAGATTGATCC GAATCCGGAGTCAAAACCTGCACGCCCGGATCCTGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCTGAAGCGCGAG CCCGATTAGCCAACACAAAGGGAAAGAAGGCAAAAAGGAAGGTTAGGGAAAAACAACTTGAGGAAGCCCGGAGGCTCGCA TCTTTACAAAAGAAGAGAGAGCTGAAAGCGGTTGGAATTGATATCAGGCGCCGGAATAGAAAAAGGAGAGGGATAGACTA CAATGCAGAAATTCCATTTGAGAAGAGGCCTCCTCCGGGGTTTTTTGATTTTACAGATGAAGATAGACCGGTGGAACAGC CCAAGTTCCCTACTACAATTGAAGAACTTGAGGGAAAAAGGAGGGTTGACGTCGAGGCACAGTTGAGAAAGCAGGACATT GCAAAAAATAAAATTGCTGAGGGGCAAGATGCGTCGTCTGCTATACTGCATGCCAACAAGCTGAATGACCCAGAAACAGT AAGAAAGAGGTCAAAACTGATGCTTCCGCCACCCCAGATCTCTGATCAGAAATTGGATGAAATTGCAAAGCTGGGTTACG CCGGTGATCTTGCAGGGAATGAGGAACTTGCAGAAGGTAGTGGTGCAACACATGCTCTTCTGGCTAATTATGCACAAACA CCTGGCCGAGGAATGACTCCTTTACGAACCCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGA AAATCTGGCCAGATTAAGGGAGTCTCAGACACCATTGTTAGGAGGAGAGAACCCAGAGTTGCACCCTTCAGATTTTTCCG GGGTTACTCCTAAGAAAAATGAGATTCAGACTCCAAATCCGATGCTGACTCCCTCTTGA
Protein sequence (LotjaGi5g1v0208700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKL LDAACVKDDNYEPGDDPRKLCPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKVREKQLEEARRLA SLQKKRELKAVGIDIRRRNRKRRGIDYNAEIPFEKRPPPGFFDFTDEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDI AKNKIAEGQDASSAILHANKLNDPETVRKRSKLMLPPPQISDQKLDEIAKLGYAGDLAGNEELAEGSGATHALLANYAQT PGRGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKNEIQTPNPMLTPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 31 | 31 | 10.136 | ||
| SMART | 1 | 33 | 33 | 4.0 | ||
| PANTHER | 1 | 392 | 392 | 1.1E-233 | – | |
| Gene3D | 1 | 35 | 35 | 1.1E-8 | – | |
| Pfam | 2 | 31 | 30 | 8.7E-6 | ||
| CDD | 2 | 31 | 30 | 1.30699E-7 | ||
| SUPERFAMILY | 11 | 84 | 74 | 2.23E-21 | ||
| ProSiteProfiles | 32 | 85 | 54 | 21.053 | ||
| CDD | 33 | 84 | 52 | 7.80819E-32 | – | |
| Gene3D | 36 | 87 | 52 | 2.5E-10 | – | |
| SMART | 36 | 83 | 48 | 1.7E-12 | ||
| Pfam | 40 | 91 | 52 | 1.5E-9 | – | |
| MobiDBLite | 92 | 125 | 34 | - | – | |
| MobiDBLite | 191 | 213 | 23 | - | – | |
| MobiDBLite | 353 | 392 | 40 | - | – | |
| MobiDBLite | 376 | 392 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi5g1v0208700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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