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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0222900 |
| Transcript ID | LotjaGi5g1v0222900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Formin-like protein; TAIR: AT3G05470.1 Actin-binding FH2 (formin homology 2) family protein; Swiss-Prot: sp|Q9MA60|FH11_ARATH Formin-like protein 11; TrEMBL-Plants: tr|G7I8P1|G7I8P1_MEDTR Formin-like protein; Found in the gene: LotjaGi5g1v0222900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52972568..52977023) extracted from Lotus japonicus Gifu genome v1.2.
CTTCAGTGGTCTTAGTTACACAAGATAAAACTAAATCATTGAATCTTGGATTTAAACAAATTTGATTTTGCTCAAAATAT CTGTAAGGTGAGAGGCCTTTTGTCCCCACCTTATGAACTCAACTATGCTCTTTTATTTGCTTATAAAAATGGGGTTGGAG ACATGGGAAATCTTATGGAATCAGCCGTATAATAAGCGTTAGGCAAGCCCCCAACAAAATTAGGACCCACCATCTACCTT TAGATTGTTCTGATTAAACCAGTTTTTTAGCTGCTAAAAAGTTTTATCATGTTCCAATTCTATGATACCAACCTTTTCAA TCCTCAACCTAACGCTAAAAGGAAGAAAATATTGGAGTGTTTTGATCACAAGAAGCGGAAGAATAACACACTAACATGAC TTTTCTGACAAAACACCCCTCAAAAAAGAATATAAGACAAAAGAATTAAGTCAAAGTCATAGCAGGGAAAGATTTTCCAA AACAATGTTAGATGCATTAATAGTGTCTTGCAGGGGTAGAATTGATTATGGTGAGAGGAGATAGATAAGAGTGTATGAAG AGTGTATGAAGAGGGAAGGAAAGAAGGTCCAGTACAAGTTACAACCACAACTGCCAGGTTCAGGGGTTCCTTGGAGTAGC ATTAAAGACACAGTTCCAGATCTTCACCTCACACATCACCAGCACCACCCAAATGGCAATTTTTTTGCTTTTTCTCTTTG AGAAACTAATGCAACAAAAAGAGAACAAGCTTTTATAAAGGAAAGGTGCATTGATTATTATCTCAATGACTTTTAGTTGG AAGAAGAAAATGGGAAGAAGCTTTTGTGGCTTTGAGCTTCTTACCATGATCTTGATCATCATCACTACCCTCTTGGTGCT GCTATCAGCACAAAGAACCCACATTTTGTCTGTGGATGATTTAATGAATGCAGTTGGAAGCTTCAACTTTCATGGCCTGC AACAACCACAGATGTATGAGGAGAATGAGCAAGGAAGAGAAAACAAGGTGAAGAAAATTTCAGGACTTGATGAGAATGAA GAGAAGCAAGCTTTTATAGTGGAAAAAGTAAGATCTTTGCTTGGTCTAAGGAGTTTTCATGCCAGAAAACCATCCAATGG AGACTCTCAGTTTCTTCCTCCATCACCTTCTCCATCACCTGCTCCTGCTCCTTCTCCTGTGCTGCACCTGCATCCTCATT CTCATCATAAGCAACACCATTTTCATAGGAACCTTCCACCTAAGAAAACTCATGGTGGAGATAGAGACAGAGCTAAGAGA ATACTAGTAGCTGTTCTTGTTTCTGTGGGTGTTGCTGCATTGGTTGGTGCTTTTGTGTCAATCTTTTTCTGCTGGAAATT CACAAATCACAGAAAGAAGCCCAAGAGGACAATGCCACTCTGCAGCAGCAAGAACAAAGAAGCAAAGGTGAGTTCATCAA ACTCAGGGCTAGATCGGTTTTATCTTGATGCTTTAGGTGAGGATATAGAGCAACACTCTTCCAGCTTGAAAAGGTTAGAA TGTGACAATGTTAGCTGTTCTTTCACCAAAGAAATTGTGTCTGTTCATGATGATGTGGAAGAATCAGTGAAAGTTGAATC TGATGGGGGCAACTCTTCTGAAAGGGATAAAATTATCCCTGAAGATTGCAATTCATCAGATGATGAAAGCTTTCATTCCT TTGTTGATTCACAATCAAATGCTAGACTTTCCAATGCTTCAGCTTGTAGCTTGAGTGACACACACTCTCTGTCATCCCCT CAAAATTCAAGTTCATTACCAAACCAATTTACTAGTTCTCCCCAAAATTCAATCTCAAAAACACAATCTCACCAAGCACC TTATAGTCCAAAACATGAAGAGCAAGAGATTGAGGCTTTTTCCATTTCCCCTCCACCTGCTCCACCAACTCCTCCACCAC CTCCCCCACCACCTCCACCCTTGCAAATGCCACTGTTTTCTCTGCATTCTCTTACCACTTCATCTAGAGTTTCCTCTCAC TCTCCACTTTCTTTGACATCTCACAATTTGTCATCTCCTATAAATTCAGACACTTCCTCAAGATCAAATCCAAGTCCTGA AAAGGAGTTGCTTTCTCCACCTCATCCTGACCCTACAAAATCTCCTTCCACCATTCCTCCACCACCATGCCCACCTCCAT TTTTAAAAGGTATAAGTAAAAATGCCAAAACCCCACCTCCTCCACCATCTCAATTCCCTCAATTCACACCATTAGGCAAA GATGGTACACCACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAATCGCACTATGGTTTGGGA TAAGCTAAGATCAAGCTCATTTGAGTAAGTTCAACTTCATTAGTAACAATTAAGCAATAACAATTTCATTTTTTACTTCT TAATTTTTCCCCAGTTTAAGTACATGATGAATTTTAATCAGGTTGGATGAGGAAATGATCAAGTCACTTTTCGGCTACAA TTTACACGGTTCGATTAAGGATGACGAATCAAAGAGCAAAACCCCATCTCCAAGCAAGCATGTTCTTGAGCCTAAACGGC TGCAGAACATAACAATACTCTCAAAAGCTCTGAATGCGACAGCTGAACAAGTTTGTGAAGCACTAATGCAAGGTAAAAAA ACACCTCAATTATGAGCACTTGCCACAAAAAAGGTACTTTCTAGTACACAGTAAAATTATTGTTTTACAGGTTCCAAGTT TCAAAGCGCATTTGTCATGAACATGGAGGAAGTAAAACATTTTGTCCCATTCTCATGAGATAAAGTATAACTGTTACTGA ACAGCATCACTGCAATAATAGTTTCTGTTATAAGTTATATCTACTAATTAAAATCACACACCGACTTTGACTAGTAGCAT TAGAAGATGAATGCATCTACCATATGTTGAAGACAATTAATACCATGTTTGGACAAGTCTTTTTCCTTTTCTCAAAATCA ATTCTGATATCAAGAAGCTACTCATAGAAACTTCTCTTTAGAATTGATTTTGACATTAAAATCAATAGTAGAAAAATTCT CAAAGATGCACTAAATGTTTGGAGTGATGTTGTCTAAGTAAGATCTCATTAAATTGTTTGAAAAACCAGGGAAAGGACTG TCTTTGCAACAACTAGAAGCACTGGTGAAAATGGTGCCCACCAAGGAAGAAGAGGACAAGCTCACCAGTTACAAAGGCGA CATAAATGAACTGGGGTCAGCTGAAAAGTTTTTGAGGGCAATGCTGAGTGTCCCATCTGCCTTTCAACGAGTAGAAGCCA TGCTCTATAGAGAAACTTTTGATGATGAAGTTGTTCATCTCAGGAACTCATTTTCAATGCTCGAGGTATAACCACCAAAG TTTTAAGACCCTTATTTTTTTTTCCCTATTTGCAAAAACACAAACGTGCAAATCGTGAAACCAAACATGCACTTACTTTT TCCAATTCTCGTTCATTGTGTCTCATTTACTATCCCACCAGGAGGCATGCAAAGAGCTAAGATCAAGCAGGCTCTTCTCG AAACTGCTTGAAGCGGTACTGAAAACCGGCAACCGCATGAATGTAGGAACAATCAGGGGTGGCGCAAGTGCATTCAAGCT CGATGCGCTTCTCAAGCTTGCAGATGTGAAGGGAACTGACGGCAAAACCACCTTGCTCCATTTCGTTGTTCAGGAGATTG TTCGCTCTGAAGGGATCAGAGTTTCAGACAGCATCATGGGGAAGATCAGCCAAAGAACCAACAAGAACCGAACAGAGGAA GAGAAGGAAGATGATTACAGAAGAATGGGACTAGAACTTGTTTCTGGTCTCAGCACCGAACTTTACAATGTTAAAAAGAC AGCAACTATTGATTTGGATGTTCTTGCAAGCTCTGTGTCGAATCTCTCAGAGGGAGTGGCGAGGATGCAAAATCTGGTGG ACATGGAGTTGCGTGAGGATGAAGGAAGCATGAACTTTGTGCGGTCTATGAAGATGTTTTTGAACTATGCAGATGTGAAT TTGAAGGAGTTGCGAGGTGATGAAGATAGAGTTCTTGCTCGTGTGAAGGAAATCACAGAGTATTTTCATGGGGTTGTGAT GAGCAAAGAGGATGCAAACCTGCTAAGGATCTTTGTCATAGTGAGAGATTTTCTGGGGATGTTGGATAATGTGTGTAAAG AGCTTAGAAGATCTAGAACTCCACGCACTCCAAATCCTCTTGCTCCCTTCAGATAAAGATTGTTATCACTGTGTGTGTTC ATAGGGATTGAAATTTTCAAACAAACTGAGTGTAACTTTATGGTTCTTGTGGAGTTTTTGTAATATGTGACTTTCAAATG ATAGTGTATCTATTACTAGTAGAGGATTAATGTTCTTACAGTTTGAAAATTAGTGATCACTATTCACAACCTTCTTATTT TCCATACTTGTGTTGTGTTATGATCTCTATACATTGTATTTAGTTTTTCATTCCAC
CDS sequence (LotjaGi5g1v0222900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTTTAGTTGGAAGAAGAAAATGGGAAGAAGCTTTTGTGGCTTTGAGCTTCTTACCATGATCTTGATCATCATCAC TACCCTCTTGGTGCTGCTATCAGCACAAAGAACCCACATTTTGTCTGTGGATGATTTAATGAATGCAGTTGGAAGCTTCA ACTTTCATGGCCTGCAACAACCACAGATGTATGAGGAGAATGAGCAAGGAAGAGAAAACAAGGTGAAGAAAATTTCAGGA CTTGATGAGAATGAAGAGAAGCAAGCTTTTATAGTGGAAAAAGTAAGATCTTTGCTTGGTCTAAGGAGTTTTCATGCCAG AAAACCATCCAATGGAGACTCTCAGTTTCTTCCTCCATCACCTTCTCCATCACCTGCTCCTGCTCCTTCTCCTGTGCTGC ACCTGCATCCTCATTCTCATCATAAGCAACACCATTTTCATAGGAACCTTCCACCTAAGAAAACTCATGGTGGAGATAGA GACAGAGCTAAGAGAATACTAGTAGCTGTTCTTGTTTCTGTGGGTGTTGCTGCATTGGTTGGTGCTTTTGTGTCAATCTT TTTCTGCTGGAAATTCACAAATCACAGAAAGAAGCCCAAGAGGACAATGCCACTCTGCAGCAGCAAGAACAAAGAAGCAA AGGTGAGTTCATCAAACTCAGGGCTAGATCGGTTTTATCTTGATGCTTTAGGTGAGGATATAGAGCAACACTCTTCCAGC TTGAAAAGGTTAGAATGTGACAATGTTAGCTGTTCTTTCACCAAAGAAATTGTGTCTGTTCATGATGATGTGGAAGAATC AGTGAAAGTTGAATCTGATGGGGGCAACTCTTCTGAAAGGGATAAAATTATCCCTGAAGATTGCAATTCATCAGATGATG AAAGCTTTCATTCCTTTGTTGATTCACAATCAAATGCTAGACTTTCCAATGCTTCAGCTTGTAGCTTGAGTGACACACAC TCTCTGTCATCCCCTCAAAATTCAAGTTCATTACCAAACCAATTTACTAGTTCTCCCCAAAATTCAATCTCAAAAACACA ATCTCACCAAGCACCTTATAGTCCAAAACATGAAGAGCAAGAGATTGAGGCTTTTTCCATTTCCCCTCCACCTGCTCCAC CAACTCCTCCACCACCTCCCCCACCACCTCCACCCTTGCAAATGCCACTGTTTTCTCTGCATTCTCTTACCACTTCATCT AGAGTTTCCTCTCACTCTCCACTTTCTTTGACATCTCACAATTTGTCATCTCCTATAAATTCAGACACTTCCTCAAGATC AAATCCAAGTCCTGAAAAGGAGTTGCTTTCTCCACCTCATCCTGACCCTACAAAATCTCCTTCCACCATTCCTCCACCAC CATGCCCACCTCCATTTTTAAAAGGTATAAGTAAAAATGCCAAAACCCCACCTCCTCCACCATCTCAATTCCCTCAATTC ACACCATTAGGCAAAGATGGTACACCACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAATCG CACTATGGTTTGGGATAAGCTAAGATCAAGCTCATTTGAGTTGGATGAGGAAATGATCAAGTCACTTTTCGGCTACAATT TACACGGTTCGATTAAGGATGACGAATCAAAGAGCAAAACCCCATCTCCAAGCAAGCATGTTCTTGAGCCTAAACGGCTG CAGAACATAACAATACTCTCAAAAGCTCTGAATGCGACAGCTGAACAAGTTTGTGAAGCACTAATGCAAGGGAAAGGACT GTCTTTGCAACAACTAGAAGCACTGGTGAAAATGGTGCCCACCAAGGAAGAAGAGGACAAGCTCACCAGTTACAAAGGCG ACATAAATGAACTGGGGTCAGCTGAAAAGTTTTTGAGGGCAATGCTGAGTGTCCCATCTGCCTTTCAACGAGTAGAAGCC ATGCTCTATAGAGAAACTTTTGATGATGAAGTTGTTCATCTCAGGAACTCATTTTCAATGCTCGAGGAGGCATGCAAAGA GCTAAGATCAAGCAGGCTCTTCTCGAAACTGCTTGAAGCGGTACTGAAAACCGGCAACCGCATGAATGTAGGAACAATCA GGGGTGGCGCAAGTGCATTCAAGCTCGATGCGCTTCTCAAGCTTGCAGATGTGAAGGGAACTGACGGCAAAACCACCTTG CTCCATTTCGTTGTTCAGGAGATTGTTCGCTCTGAAGGGATCAGAGTTTCAGACAGCATCATGGGGAAGATCAGCCAAAG AACCAACAAGAACCGAACAGAGGAAGAGAAGGAAGATGATTACAGAAGAATGGGACTAGAACTTGTTTCTGGTCTCAGCA CCGAACTTTACAATGTTAAAAAGACAGCAACTATTGATTTGGATGTTCTTGCAAGCTCTGTGTCGAATCTCTCAGAGGGA GTGGCGAGGATGCAAAATCTGGTGGACATGGAGTTGCGTGAGGATGAAGGAAGCATGAACTTTGTGCGGTCTATGAAGAT GTTTTTGAACTATGCAGATGTGAATTTGAAGGAGTTGCGAGGTGATGAAGATAGAGTTCTTGCTCGTGTGAAGGAAATCA CAGAGTATTTTCATGGGGTTGTGATGAGCAAAGAGGATGCAAACCTGCTAAGGATCTTTGTCATAGTGAGAGATTTTCTG GGGATGTTGGATAATGTGTGTAAAGAGCTTAGAAGATCTAGAACTCCACGCACTCCAAATCCTCTTGCTCCCTTCAGATA A
Protein sequence (LotjaGi5g1v0222900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFSWKKKMGRSFCGFELLTMILIIITTLLVLLSAQRTHILSVDDLMNAVGSFNFHGLQQPQMYEENEQGRENKVKKISG LDENEEKQAFIVEKVRSLLGLRSFHARKPSNGDSQFLPPSPSPSPAPAPSPVLHLHPHSHHKQHHFHRNLPPKKTHGGDR DRAKRILVAVLVSVGVAALVGAFVSIFFCWKFTNHRKKPKRTMPLCSSKNKEAKVSSSNSGLDRFYLDALGEDIEQHSSS LKRLECDNVSCSFTKEIVSVHDDVEESVKVESDGGNSSERDKIIPEDCNSSDDESFHSFVDSQSNARLSNASACSLSDTH SLSSPQNSSSLPNQFTSSPQNSISKTQSHQAPYSPKHEEQEIEAFSISPPPAPPTPPPPPPPPPPLQMPLFSLHSLTTSS RVSSHSPLSLTSHNLSSPINSDTSSRSNPSPEKELLSPPHPDPTKSPSTIPPPPCPPPFLKGISKNAKTPPPPPSQFPQF TPLGKDGTPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIKSLFGYNLHGSIKDDESKSKTPSPSKHVLEPKRL QNITILSKALNATAEQVCEALMQGKGLSLQQLEALVKMVPTKEEEDKLTSYKGDINELGSAEKFLRAMLSVPSAFQRVEA MLYRETFDDEVVHLRNSFSMLEEACKELRSSRLFSKLLEAVLKTGNRMNVGTIRGGASAFKLDALLKLADVKGTDGKTTL LHFVVQEIVRSEGIRVSDSIMGKISQRTNKNRTEEEKEDDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEG VARMQNLVDMELREDEGSMNFVRSMKMFLNYADVNLKELRGDEDRVLARVKEITEYFHGVVMSKEDANLLRIFVIVRDFL GMLDNVCKELRRSRTPRTPNPLAPFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 35 | 24 | - | – | |
| TMHMM | 15 | 34 | 20 | - | – | |
| PANTHER | 16 | 906 | 891 | 0.0 | – | |
| PANTHER | 16 | 906 | 891 | 0.0 | – | |
| Phobius | 36 | 165 | 130 | - | – | |
| MobiDBLite | 109 | 159 | 51 | - | – | |
| MobiDBLite | 116 | 132 | 17 | - | – | |
| MobiDBLite | 135 | 151 | 17 | - | – | |
| TMHMM | 166 | 188 | 23 | - | – | |
| Phobius | 166 | 190 | 25 | - | – | |
| Phobius | 191 | 906 | 716 | - | – | |
| Coils | 227 | 247 | 21 | - | – | |
| MobiDBLite | 265 | 297 | 33 | - | – | |
| MobiDBLite | 265 | 294 | 30 | - | – | |
| MobiDBLite | 316 | 494 | 179 | - | – | |
| MobiDBLite | 316 | 351 | 36 | - | – | |
| MobiDBLite | 367 | 389 | 23 | - | – | |
| MobiDBLite | 391 | 432 | 42 | - | – | |
| MobiDBLite | 434 | 460 | 27 | - | – | |
| ProSiteProfiles | 483 | 906 | 424 | 49.533 | ||
| SMART | 483 | 898 | 416 | 3.0E-109 | ||
| Pfam | 485 | 883 | 399 | 2.1E-110 | ||
| SUPERFAMILY | 496 | 893 | 398 | 1.7E-88 | – | |
| Gene3D | 545 | 898 | 354 | 1.9E-79 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0222900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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