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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0232500 |
| Transcript ID | LotjaGi5g1v0232500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC(ATP-binding) family transporter; TAIR: AT5G02270.1 non-intrinsic ABC protein 9; Swiss-Prot: sp|Q9LZ98|AB20I_ARATH ABC transporter I family member 20; TrEMBL-Plants: tr|A0A0L9TY78|A0A0L9TY78_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0232500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53993628..53996826) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGTATCAATGGCAATTCAGTTACAGATGCAACGGTTGTGATCAGAGATCTGAGATTCACATACCCTGGCATCGACGG CCATCCACCGCCGGGTTCAACTCCGCTCATTCAAGACTTCTGCCTCACTCTCCATTCCGGCGATCGCTGCCTTCTCGTCG GATCCAATGGCGCTGGTTGGTTCTCTCTCTCTCCCTCTCTCTCTCTCTTGAAGCTTTTACTCTTTTTTGTTTTTTTTTTA TTGATTTGTGTGTTTTTGTTTTGGTTTCTAGGGAAGACGACGATCCTGAAGATATTGGGAGGGAAACACATGGTGGAGCC GGAAATGGTTCGTGTGCTCGGAAGATCGGCTTTTCACGATACCGGTTTGTCGTCTTCTGGTGATCTCTGTTATCTTGGTG GTGAGGTCAGTGAGGTTCCTCCTTCATTTTTTTTTATATTTTTCCATTGATTTTGTGATATTCTTAGAGCAATTATAGGA AAAAAATTGAAAATGATGATGCTATCTGCATGTTTAATCAGCTTATTTTTGTTCATGATCAATTGTAGAAACTAGAAACA TTCACTAACATGCTATAAGTAATAGCCATCTCAAAATTTCCAAAAGCTCTCTTATCTAATAATAATCATAAGTGTCGGGG TTCGAACCGAGGAGGGGTGGGTAGCTCACATGGTTGAGCTAAGGGTAATTGTAGGTGTAGGTGAAGGGCCATGGTTCGTA CGCTGAGGAGGGATAATTTGTACTAATTTACTAACAACTGATATTTGCCTATTAAAAAAAATCACAAGTGTCTTAAAGAA AACTTTCTTCATAAGTAAGTACATTTAAGGGGGTTTTCATTACTTAGAATAGAAATCAATAACTGATCTCATTTGAGAAG CTCTAATAAACTAGATGGCAAGCCAAATTATCAGGGAAATTATGTTGTGATTCTTACTTTTTTGGTTTCTGTCTGAATGG TAACTGTTAGTGATTGGTTCCGTCATTTTATCTTGCTAAATTTAAATTAACCCAAAAGATCAATCAAATCATGTAGAGAC AGATTAATCATGTCATGATTTAGATATTGTAGAGGACCTGGTGTAATTAGGGATCCATGGTTGTGTTAACTATTTGTAGT GGAAGCGTGAACGCCATAAAGAGTGATCTGCTCTCTATCTGATGAGTAATATGTTTTCAAATAACAAAAGCCCAATATAG ACTAATTGATTGATTAATGTTAATCTACACGACCGAAATAGAGATATATCTAAATAATACAACAAAATAATCAGGGAATT TATGTTGTGATTATTATTTGTTTGGCTTCTGTCTTAATGGAAACTGTTAGTGATTGGTTCCATCATTTTATTTGGGGTTG GGGCACAGTGGAGGCGGGATGTTGCTTTTGCAGGTTTTGGGGTTTCGATTCAAATGGACATTTCTGCAGAGAAAATGATA TTTGGTGTAGGTGGGATTAACCCAGAAAGAAGAGCGGAGCTAATTAAGGTTGGATGAATCTTTTCTCCATCTTTTATAGC TTAACAACACGGTTGCTTGGTTTGTATGTCAGCATGCATTTTATGCTTTCATTTTCCCTCTTTATCCACTGTTGTTTTGT GATGGGATTGACTTTTTTTATGGATTTGTTTTGTGTATATGGGTTGTACATCAGCACATGCATGAGGTTTCTTTTTATAC CGGATATAATTTATGTAATGAAATATAAAGGAACTTACTGGGGTCGAAAAAGGTGAACCTAAATGCATTTTTTTGATACC CTCATCTATATCCATGAATTAAACATCGGTAGATGACATAAAGGCTGGACTCCCCCATGCATGGCTATTTTCTGGAATGT TTCTTTAGTTATGCATATGTAGTTGTCTCAGGAAAATCATTGCTTAATTTCTGTTGTGCTGTTCAACTGGGAAGGTATTA GGTATCGATCTTTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTACTTAA ACCATTCAAGGTATGATAATCTTTTGTTGATGTATTGAGAAGTCCTTACAGCTTCTTCCTTTTTACAATGCAATATATTC TTCTATTTGCGGCTTCATTGCACTAATGAATTAGGATTGCTCCTTGTCCTTGTTTATCTAGGTTCTTCTTCTGGATGAGA TAACAGTTGACCTTGATGTTCTAGCGAGAGCTGATCTTCTGAGTTTTCTAAAAAAGGAATGTGACGAGAGGGGTGCCACT ATTATCTATGCAACTCACATATTTGACGGTCTTGAAGATTGGCCCACACATATGGTGTGTTGAATTTCCATCCTGAACTA TTTTATGTCAATATTTGGCATAACCCTTAGTCTTTTTTGGGTTCTCTTGTCAGGTTTATGTAGCCCACGGAAAGCTCCAA CTAGCTATGCCTATGGACAAAGTCAAAGAAAATAGCAAATTGTCACTGATGGTTTGTTTTGTTCCTAATCTTGGCTTAAA AAGCTTATGATCAATTACTTGTTTGTGTCACCAATTATATCTTACTTATCTTTAGTAATATGAGCGCTGGTTGACTGTTA AGCCTTGAATAGCATCAAATGGTTATGGAATGAAATGAACAGGATTATAGAATATGTAGCGAAGCTGTGAAACTGTGCAA ATGTGCAATGTTACAATTTAACAACAAAGAAGATAATATAGTTAATTGGTTCTTAATGTGCAGAGAACAGTAGAAAGTTG GCTGAGGAAAGAACGAGATGAAGATAGAAGAAAAAGAAAAGAGAGGAAGGATGCTGGCCTTCCTGAATTTGAAAAGCAAG TTGAGGGAAGCCGTGTAGCAGGAGGGGATCCAGGGCGTGCTGCTGTTCGAGCAGTGAATAATGGCTGGGCAGCAGGACGA TTGCATTCCACCATTGCTGGTGAAGAAAACTTTCTACTAAGCTCTAACCGAGTATTGAGATAGTAGACAAGTATCAAATT TTACCAGTGCTTTTGTTGTTTATTTTTATGAGCTTAAAATAAATTTTATTTGCCAATGCGTAATTATATTCCTCTGTAAT ATGGAAAGGATCACATGTTATGCAGTAAAAATCAAAGCTAATGTATTTACCCTTGATAGTGAGGAAAAGCATACCCCAAT ATTCATTAACTTACACCAAGATACCAATTTATGTAGACATCATCATGAAAAAAGATCTATCAAGGGAAGATTTTTCTAA
CDS sequence (LotjaGi5g1v0232500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTATCAATGGCAATTCAGTTACAGATGCAACGGTTGTGATCAGAGATCTGAGATTCACATACCCTGGCATCGACGG CCATCCACCGCCGGGTTCAACTCCGCTCATTCAAGACTTCTGCCTCACTCTCCATTCCGGCGATCGCTGCCTTCTCGTCG GATCCAATGGCGCTGGGAAGACGACGATCCTGAAGATATTGGGAGGGAAACACATGGTGGAGCCGGAAATGGTTCGTGTG CTCGGAAGATCGGCTTTTCACGATACCGGTTTGTCGTCTTCTGGTGATCTCTGTTATCTTGGTGGTGAGTGGAGGCGGGA TGTTGCTTTTGCAGGTTTTGGGGTTTCGATTCAAATGGACATTTCTGCAGAGAAAATGATATTTGGTGTAGGTGGGATTA ACCCAGAAAGAAGAGCGGAGCTAATTAAGAAATGCATTTTTTTGATACCCTCATCTGTATTAGGTATCGATCTTTCCTGG AGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTACTTAAACCATTCAAGGTTCTTCT TCTGGATGAGATAACAGTTGACCTTGATGTTCTAGCGAGAGCTGATCTTCTGAGTTTTCTAAAAAAGGAATGTGACGAGA GGGGTGCCACTATTATCTATGCAACTCACATATTTGACGGTCTTGAAGATTGGCCCACACATATGGTTTATGTAGCCCAC GGAAAGCTCCAACTAGCTATGCCTATGGACAAAGTCAAAGAAAATAGCAAATTGTCACTGATGAGAACAGTAGAAAGTTG GCTGAGGAAAGAACGAGATGAAGATAGAAGAAAAAGAAAAGAGAGGAAGGATGCTGGCCTTCCTGAATTTGAAAAGCAAG TTGAGGGAAGCCGTGTAGCAGGAGGGGATCCAGGGCGTGCTGCTGTTCGAGCAGTGAATAATGGCTGGGCAGCAGGACGA TTGCATTCCACCATTGCTGGTGAAGAAAACTTTCTACTAAGCTCTAACCGAGTATTGAGATAG
Protein sequence (LotjaGi5g1v0232500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSINGNSVTDATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRV LGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGVGGINPERRAELIKKCIFLIPSSVLGIDLSW RLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLSFLKKECDERGATIIYATHIFDGLEDWPTHMVYVAH GKLQLAMPMDKVKENSKLSLMRTVESWLRKERDEDRRKRKERKDAGLPEFEKQVEGSRVAGGDPGRAAVRAVNNGWAAGR LHSTIAGEENFLLSSNRVLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 340 | 335 | 1.2E-168 | – | |
| PANTHER | 6 | 340 | 335 | 1.2E-168 | – | |
| Gene3D | 8 | 298 | 291 | 3.1E-33 | – | |
| ProSiteProfiles | 13 | 265 | 253 | 13.779 | ||
| SUPERFAMILY | 30 | 255 | 226 | 8.08E-34 | ||
| Pfam | 39 | 192 | 154 | 8.0E-13 | ||
| SMART | 46 | 242 | 197 | 2.7E-6 | ||
| MobiDBLite | 271 | 305 | 35 | - | – | |
| MobiDBLite | 271 | 291 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi5g1v0232500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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