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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0240200 |
| Transcript ID | LotjaGi5g1v0240200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Squamosa promoter-binding-like protein; TAIR: AT2G47070.1 squamosa promoter binding protein-like 1; Swiss-Prot: sp|Q9SMX9|SPL1_ARATH Squamosa promoter-binding-like protein 1; TrEMBL-Plants: tr|A0A0S3SQY1|A0A0S3SQY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0240200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54841308..54849627) extracted from Lotus japonicus Gifu genome v1.2.
CACTTTTCTTTCCTCTTACTTTCTTTCCGAACCAAACAAAGCCTAAATCCTCATCTGCAAGCAGTCTATAGTTCGATCAC TGAATGATACGTATGAAGAAGAATTTGCTGGAATGGACGTAATATGATCTCAGAAAGTCTCGAGATGATTAGTCTTATAA CTGCCAATTATTTAGTATAACTATGGCATGAGGTAAAAAGGACGAAGAGAGACATGCAGCGTGTGCAGGTGGCCCACCAC TATGAAAGCGGTGCGGTGCACTGTACTGTTCCCAATCCCTCACCCCCACATACGACTTATAATTATTTTATATTTTTATT TATTTTGTCATGTGTGTTGTGGAGTAGTGTACCATACCACAATAGAATATATCGAACCATTCTTTCACCAAAAAGAAAAA AAAATAATTAATTAAAATTTTCATTCACATCACCACCATCATCACCAACAACAACAGCAACAACAACGTTTTCGTCCACA GAACCTGTTGCTATTTGCGTGTGTTCGCGATCTGCTTTCCTTGTAACGCTTATCCTCTGACGTACGAGTACGATGATGTT TACCTTCAATCTCATCATTTTGCTGTTGAATTTTAGTTTAGTTTTCAATTTTCAGCTCAGCTAGGTTTCTGTTAATCTGT TTATGTAGGTAACTTGCCAAATTGGAAGACCTAGTTGATAGTTTCTAGTACTTGGCTATGAAGGTTGAGCCTAATTGGAA CCATGGTTGCGTTAGGGGTGCACTTTCTGGACTCTTGGGGTTGAATTGAGGCTAATTGACTGTGATTCTGTGTTTTGTCA ATTTCTTACTGTGACTTAATTTAGGTTAATTGGTTGTGAGTTGTGACGATGGAAGCTAGATTCGGTGCAGAAGCTTATCA TTATTATGGTGTGGGTGCCTCTTCTGATATGAGGGGTATGGGGAAGAGGTCTGCTGAGTGGGATTTGAATAATTGGAGGT GGGATGGGGATCTGTTCATTGCTAGTAGGGTGAATCCAGTGCAGGAGGATGGGGTTGGTCAACAACTTTTCCCTCTTGTG TCCGGGATCCCAGCGTCGAATAGCTCTTCTTCGTGTTCTGAGGAGGTAGATCTTAGGGATCCCATGGGGAGTAGGGAAGG GGAGAGGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGAGGAAGGAGGTACGCTTAGCTTGAAGCTTGGTG GGCATGCTGCGGATAGGGAGGTTGCAAGCTGGGATGGGGGGAATGGGAAGAAGAGCAGAGTGGCTGGTGGGGGTGCTTCG AATCGCGCTGTTTGTCAGGTGGAGGACTGTTGTGCAGATCTGAGCAGGGCTAAGGATTATCACAGGCGTCATAAAGTTTG TGAGATGCACTCCAAGGCCACTAGGGCACTTGTCGGAAATGCAATGCAAAGGTTCTGTCAACAATGCAGCAGGTGAGTTT CCCTTCTAGATTGCTTTCCATTTTTGTTGTAGTTGATCAGTTTGGTATTGGTTTAAATTTATATGTCTATATATGAAATA AAGGTATTAATTATGACACTTAGATGTAATAAATTGATGAATATGGAAATTATATCTGAAATTCTGAATATAGAAGAAGA TCATTATGGATTTCTTTTAGAGGTCCTTTATGCTATTGTTTGTTATACACTTTGACTCAAGCATTGAAAGTTTAAATTAC TTCTTTTACTCCATCAATAGGTTTCACATGCTTCAAGAATTTGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGGCAGG CCATAATAAACGAAGAAGGAAAACAAATAATGAAGCTGTTCCTAATGGAAATCCTCTAAATGATGATCAAACTAGTAGTT ATCTGTTGATAAGTTTGTTGAAGATACTTTCAAATATGAATTGTGAGTATCTCTTAAATCATGATTTTTATAACTAGAGC CTAGAGGAGTTGGTGGCATATAAATTGTTTTGTATGGCAATGATTGATGCTTGTTTCTCTTATTTCAAACAACAAAAGGC ATATTATTAATTTAAACTAATACTTCTTATATATAACTGCTGTTGGTGGTGGAAGGTAGTAGTTTGGTCAGCTGCAAATA TGGTTTATTAATACTGTATTTTGTCAGTAACTCTTAGTCTCTGAGAGAGAGGTTTCTTACTGAAGGTAAATCTGTATGTC CGGGTCCGGTTTTTCAAACAGAATCATTTCTAAGTAAGCCAACACACTGCTGCAGGAAATTAATTTTCTTAACTTCCATT TGACTTCATGTCGACTGATTAGTTTAGTAGGCTTTTCACTTAACTTCTATGAAAATAGTGTCAGATGGAAAACAAGAAGA TTAATTTCCATCCTTGCTTTGTGGGGACTGAATGTTGAACTTGAAGGCTGGTTGATATGTAGGGAGTTTTTAAAAGAGGA AGAAACTGGATCTGACAGCTTAGAAGAGGAAAAATAAAATGATTTGACCTTGAATTTGTGTGTTAGTCAACTTTACCTAG TGAGCTCTTATCAAGGTTAGTTTCCACTGTTAAGCATATTTAGGATTTTAGGTACGTTGCTGGACAACACATGGAATAAT ATTCTTCAATTTTGATAAAAGATCCATTGCCTAGTCATTGAACTCCTAACAAAATTGTATCAGTGGACCCTCGACCCTCA TCAATGAATTTCCAACTCAAAAGTAAACTTGCTAGCACCTTGAAAAGTGGTCCTAAATCATTACTTTTGCTACTCATGAG TCATGAGTAACATTTACTTATAGCATATAAAATCAATTTTTAGTGCTTTAATTGTTGGTGTCAAGCATGATTGACTTTCA GTTTTCCTAGTGGTAATGAGTTGTTTTGTCAAATAATTTGTGTCTCATTGATAGGGTGACTTTGTGAACACATGTAAAAT GCCCATGCATATACCAGTCAAGTATAGGATATATCCATCTTTTTCATGGGTTTTTCTAGAAACTAACATTGTGTTCATCT CTTTATTAAATTGGTCTGAGAGATCAATGGTTGACCTCTAAAAGGGGATCTAGGAGAGGGGTTACAATTTTAGCAGAAGT TATATTGAAAAAGATAAAGATACAAGGCCCTATAATAATATTTGTTCTCCTCCATTGGGCAATAAATGCATTTCAGCAAT TGGCATGCAATAAAATTTTAGGTGATCATAACAATATTTCATTTTAGGTGATCATAAAATTTTAGGTCAATCTTGTGGGA TGTTATGAACTTAGGAGACTTTTTTTTTTATAACAATGAGATACTTGAATTATTACTGCAATTGGTGAAATTGCATTTTA GATAAATTCCTGTATTTGTTTCTCTGTTGGTCTTTCTTCTTTAACTGAGGTTTTTTGGGATGGATAATGACATGTTTAAT GAATTTTAGCTGACAGATCGGATCAGACTACAGACCAGGATCTACTGACTCATCTTCTAAGGAGTCTTGCTAGTCGGAAT GGTGAACAAGGGGGCAATAACTTGTCTAACATTTTGCGAGAACCAGAGAATTTGTTGAGAGAAGGGGGTTCATCTAGGGA GTCAGAGATGGTGCCAACTTTACTCTCCAATGGTTCTCAAGGCTCTCCAACTGATATAAGACAACATCAAACTGTATCTA TGAATAAAATGCAACAAGAAGTGGTGCATGCACATGATGCTAGGGCTACTGATCAGCAGCTCATGTCTTATATAAAGCCC AGCATTTCAAACACTCCTCCAGCTTACGCAGAAGCCAGAGACAGTACCGCTGGACAAATCAAGATGAATAATTTTGATTT GAATGACATATATATTGACTCAGACGATGGCATAGAAGATCTAGAAAGATTGCCTGGAACTACTAATCATGTCACTAGCT CTCTTGATTACCCATGGACACAACAAGATTCCCATCAGTCAAGTCCACCTCAGACAAGTAGAAATTCAGAGTCTGGATCT GCCCACTCCCCTTCTAGTTCCACTGGAGAAGCTCAGGTATGTCCGATGCGCTTCATTATTTTGAATTGGCTGCTCTACTT GCAATTTTCAATACCTTCCTTGCACTCAAGTGCACAACTTGGCTCCTTGATTGTGTAACTTTGTATAGAAAATTGAGGAT GTTTTACTGAAATTACCACAAGTCTGTTTGCGGTCTTGGTTATTAGACTTTTTTGGTGATGTCTTGACACACAATTCCAT CTTGGTGGTATGACTATAAAAAATGAACTATTTCATTTAGTCATGCTCCGAAAGTAGCATTATCGTCATCTTTAATTGGT TTAGCTGCATGATTTCTGTGAAATATATGAAGAATGAAATTTGGTCTTTTTTTGTTTTGGGGGTGGGGTCCAGAGTTTTT TTATATATTTATTTGAAGGGGGGTTTTGAGACCTTGGGAGAGGATTGGAAAAGACTGGCTTTGCATATTTGGAGGGATTG ATCCCAGGATATTTGACCTCCACAGGAAACCATAGAAACTTTGATATGAATATATGAGTATTTTGATTTGATCACTCTAG TTCTTACTGGATGCGTCTCCAGTCTTTATGCTGCTTCATATAGTGTACTGTATAGAAACACATATGCCTGCACAAATCCT GGTTTAAATAGCTTGTCTGGATTTAGCCTTTTATCCCCATTGACCTGTCTTGAGGATGCTTGATGGTGTTGTTGCATCCA GTAGTTATGGTAGTGAGAAAGATTCAGACAATGTTGGTCCTTCCTTAGGGTCAAATGTGATGCTGCTTGCTTAAGTAGTT AAGTTGCTGAGGCAAAAGTTTGAAAAACAAAAACAAATTGTCTGTATTCCTATTAATTAATCATTGCCTGCCTTCATATA TGGAATTTATGGTACTCACTGCTTCCAGTATTTGATTAAATAAGCTCTCATAGTCAAAACCCCACTCTCACAAAAAAAGG ACTTTGGGAAAATATAACAGAATAAATCAATAACAATGGGGTAATTATTTCCCCTTTTCACCCAGGTTTTTGAACAATGC ATTTTTTTGTTAAATTTATCATATATTGAAATTGTCATCATTTAACTGTTAATTTTTTGTTTCCACGTTTCAGTGTCGCA CAGATCGTATTGTTATCAAACTCTTTGGTAAAGAGCCGAGTGATTTTCCTCTTATACTTAGAGCACAGGTACTTTAAGCT TTCTAAAGCAGCTACGAGTAACTGCTTTTCATTTGTTTCTCTCCAAATTTAATCACACTGAGGATTTCAATTGCCAGATT CTTGACTGGTTATCACACAGTCCTACTGATATTGAAAGCTACATACGACCTGGTTGTATTGTTTTGACAATTTATCTGCG CCAGGCTGAAGCTGTTTGGGAGGAAGTAAGCTTTTTCTTCTTAAGTTATTGACAAATGACCTGGGTGGTTATTTCTCTTT AAATTTGACTATCATGACCTGGTTGTTATTTTGCAGATTTGCTATGATCTGACTTCTAGTTTGGGTAGGCTACTGGATGT CTCAGATGATACTTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCATTCATTTTCAATGGTCTCT TACCTTATCTCTGTTGTTGTTACATATTAGGGGTCAGGATCATTGGAGTTTTCAGTAAATGAGTTCCATCAAATAAGCAC ATTAAGTCATTAACTGTTAAAATATTTGAAATCCTTGCTTTGATAAGTTGTCTATATTAGAGACTTGTATCTACATCTAA TTTATCTCCAAGCCACATTTATAAATTTGGTTGGTCGACTGCATTGAGGATTCATGTAATTATAATACTATGCTTCATTG TCTACAATCTGCATTGTTATCATCGTTTACTATGTTTGTGCATGAAGTAACTATATCATTCGGGACTAAAAGTATTTGTT TATATGGCTAGGTATCTTACTGCAATTTATATGCTGCAGGTCAAGTTGTCATCGATACATCACTACCTTTCAGAAGTAAC AATTATAGCAAGATTTTGACTGTTAGTCCTATAGCTGCACCAGCATCAAAGAGAGTTCAATTTTCCGTTAAGGGTGTCAA CATGATACGCCCTGCCACGAGGTAATCTCCATTGTTTTGTGACTTGTCAATCCTTTGCATGTAGATAGTTGAAAACAAAG TTTGAAAGTGACATGGATTGAAGTTTTATGATTTTATTTAGCTATATGTAATTTTGTTGGGCTAGTGTGTTACATGACCC TTAAATCTGTCTTCAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGGTCTGTGAAGATGCTCATGAGTCGATGGATCAA TACTCCGAGGAGCTTGATGGACTTCATTGCATCCAGTTTTCTTGTGCTGTCCCTGTAACAAATGGAAGAGGATTTATTGA GGTGCTTTTACATAACTCTCAAATTATCAACAGAAAAAAGTAGGCAGGGATAAGAAAATTGTGCACTGATCACTGAAAAT TGTACACTGCTTTTTCATCCACTTCATTTGTAATTCAATTAAGGGGATAAGGAAATTCCTCTGTTTATCCTACTTTATGG TACCCCTTTACACACACTGATCACTGTTGAGTGTTAGTGATATCCTTAGTCCTAACTCATAAGCTTTTTTGTCCAATTAT TTTTTACATTCGCTTCCATTTGCCAGTTTTCCATATTGTTAACTGAAGACAAGGAACCCTATACTAATGCTGTGTCCGCG CTTCGTGTTTTTTAATTGCTAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCATTGTTGCGGAGGAGGATG TTTGCTCAGATATCTGTGGGCTTGAGCCTCTACTAGAATTAAGTGAAACTGATCCAGATATTGAAGGGACTGGAAAGATT AAAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATAGGTTGGCTCCTTCATGGAAGCCAGTTGAAATCTAGGATGGT TCACTTAAGCTCCAGCACAGATCTCTTTCCATTGAAACGGTTCAAGTGGCTCATGGAGTTCTCTATGGATCATGATTGGT GTGCAGTAGTGAAAAAACTGCTGAACCTACTGCTTGAGGGAACTGTCAGTACAGGAGATCACCCATCCCTGGATCTAGCA CTTTCAGAGATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGCTGCTTTTGACATACGTTCC TGAAAATATCTCTAATGAAGTAAGACCTGAAGGCAAAGCACTGGTTGAGGGAGAGAAACAGAGCTTTTTGTTTAGACCTG ATGCTGCCGGTCCTGCTGGTTTAACACCCCTTCATATAGCAGCTGGGAAAGATGGTTCTGAGGATGTACTGGACGCTTTA ACTAATGATCCTTGCATGGTAAAATTCCTACTAACTGCTATCTTAAATTATACCAATCACCCTGAGAATCAATTTCCTTA AATATGTTATGCATCAAAATTGTTTTCCTATTCTGTCCTTTTGGAAATCATGTGGTCACGTTCGTGCTACATTTGTGACA TGGGTTTTTAATACAGGTGGGAATTGAGGCATGGAAAAATGCTCGTGACAGCACAGGCTCCACACCTGAGGATTATGCGC GTTTACGTGGCCACTATACTTACATTCACTTAGTGCAGAAAAAGATTAACAAGAGACAAGGAGCACCTCATGTGGTGGTT GAGATTCCCACAAATCTGACAGAAAACGACACAAACCAGAAGCAAAATGAGTCGTCCACTACCTTTGAGATTGCGAAAAC CCGTGACCAAGGGCACTGTAAACTTTGTGACATTAAATTATCTTGTAGAACTGCAGTTGGCAGGTCTTTGGTATACAAAC CTGCAATGCTCTCCATGGTGGCAGTAGCAGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAAAGTTCACCTGAAGTTCTT TACATGTTCCGACCCTTCAGTTGGGAATCGTTGGATTTCGGAACAAGCTAAGGTTTATTAACTTGCACCTTTAATAAAAC TCGATAGGTGTTGTATGAGGATGTTGTATTCATAGGCTGAATAACCGAGATTTCCTGTAGGACCGGTTCTCTGTATTGGC TAAACTGTGCTATATTACACGTATTTGTTATCCGTCAATGGACTGTCTTTGTACAACTTTGTGCAATGTATGTGGACGCA ACATTTTATGAAAGTTGAAGCACTCTGTTTAGGATCCTTTGTAGTTTAAGAGTTATACTTGTATGGAATATTCAACCTTG TCTTTGATTAATGACAAGGTTTTTTAGAAGGTAATTAAATTGAAATGGAGAATGTAAAGGCTACTAGCATGTTTAATTTT GGCTAGCATTTGCGGGTTCACAAATTAATCCACCAATCCACATTTATTTTATAATAGGAAGCATTCTGTGTTTTGTGCCA
CDS sequence (LotjaGi5g1v0240200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCTAGATTCGGTGCAGAAGCTTATCATTATTATGGTGTGGGTGCCTCTTCTGATATGAGGGGTATGGGGAAGAG GTCTGCTGAGTGGGATTTGAATAATTGGAGGTGGGATGGGGATCTGTTCATTGCTAGTAGGGTGAATCCAGTGCAGGAGG ATGGGGTTGGTCAACAACTTTTCCCTCTTGTGTCCGGGATCCCAGCGTCGAATAGCTCTTCTTCGTGTTCTGAGGAGGTA GATCTTAGGGATCCCATGGGGAGTAGGGAAGGGGAGAGGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGA GGAAGGAGGTACGCTTAGCTTGAAGCTTGGTGGGCATGCTGCGGATAGGGAGGTTGCAAGCTGGGATGGGGGGAATGGGA AGAAGAGCAGAGTGGCTGGTGGGGGTGCTTCGAATCGCGCTGTTTGTCAGGTGGAGGACTGTTGTGCAGATCTGAGCAGG GCTAAGGATTATCACAGGCGTCATAAAGTTTGTGAGATGCACTCCAAGGCCACTAGGGCACTTGTCGGAAATGCAATGCA AAGGTTCTGTCAACAATGCAGCAGGTTTCACATGCTTCAAGAATTTGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGG CAGGCCATAATAAACGAAGAAGGAAAACAAATAATGAAGCTGTTCCTAATGGAAATCCTCTAAATGATGATCAAACTAGT AGTTATCTGTTGATAAGTTTGTTGAAGATACTTTCAAATATGAATTCTGACAGATCGGATCAGACTACAGACCAGGATCT ACTGACTCATCTTCTAAGGAGTCTTGCTAGTCGGAATGGTGAACAAGGGGGCAATAACTTGTCTAACATTTTGCGAGAAC CAGAGAATTTGTTGAGAGAAGGGGGTTCATCTAGGGAGTCAGAGATGGTGCCAACTTTACTCTCCAATGGTTCTCAAGGC TCTCCAACTGATATAAGACAACATCAAACTGTATCTATGAATAAAATGCAACAAGAAGTGGTGCATGCACATGATGCTAG GGCTACTGATCAGCAGCTCATGTCTTATATAAAGCCCAGCATTTCAAACACTCCTCCAGCTTACGCAGAAGCCAGAGACA GTACCGCTGGACAAATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGACGATGGCATAGAAGATCTA GAAAGATTGCCTGGAACTACTAATCATGTCACTAGCTCTCTTGATTACCCATGGACACAACAAGATTCCCATCAGTCAAG TCCACCTCAGACAAGTAGAAATTCAGAGTCTGGATCTGCCCACTCCCCTTCTAGTTCCACTGGAGAAGCTCAGTGTCGCA CAGATCGTATTGTTATCAAACTCTTTGGTAAAGAGCCGAGTGATTTTCCTCTTATACTTAGAGCACAGATTCTTGACTGG TTATCACACAGTCCTACTGATATTGAAAGCTACATACGACCTGGTTGTATTGTTTTGACAATTTATCTGCGCCAGGCTGA AGCTGTTTGGGAGGAAATTTGCTATGATCTGACTTCTAGTTTGGGTAGGCTACTGGATGTCTCAGATGATACTTTTTGGA GAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCATTCATTTTCAATGGTCAAGTTGTCATCGATACATCACTA CCTTTCAGAAGTAACAATTATAGCAAGATTTTGACTGTTAGTCCTATAGCTGCACCAGCATCAAAGAGAGTTCAATTTTC CGTTAAGGGTGTCAACATGATACGCCCTGCCACGAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGGTCTGTGAAGATG CTCATGAGTCGATGGATCAATACTCCGAGGAGCTTGATGGACTTCATTGCATCCAGTTTTCTTGTGCTGTCCCTGTAACA AATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCATTGTTGCGGAGGAGGATGT TTGCTCAGATATCTGTGGGCTTGAGCCTCTACTAGAATTAAGTGAAACTGATCCAGATATTGAAGGGACTGGAAAGATTA AAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATAGGTTGGCTCCTTCATGGAAGCCAGTTGAAATCTAGGATGGTT CACTTAAGCTCCAGCACAGATCTCTTTCCATTGAAACGGTTCAAGTGGCTCATGGAGTTCTCTATGGATCATGATTGGTG TGCAGTAGTGAAAAAACTGCTGAACCTACTGCTTGAGGGAACTGTCAGTACAGGAGATCACCCATCCCTGGATCTAGCAC TTTCAGAGATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGCTGCTTTTGACATACGTTCCT GAAAATATCTCTAATGAAGTAAGACCTGAAGGCAAAGCACTGGTTGAGGGAGAGAAACAGAGCTTTTTGTTTAGACCTGA TGCTGCCGGTCCTGCTGGTTTAACACCCCTTCATATAGCAGCTGGGAAAGATGGTTCTGAGGATGTACTGGACGCTTTAA CTAATGATCCTTGCATGGTGGGAATTGAGGCATGGAAAAATGCTCGTGACAGCACAGGCTCCACACCTGAGGATTATGCG CGTTTACGTGGCCACTATACTTACATTCACTTAGTGCAGAAAAAGATTAACAAGAGACAAGGAGCACCTCATGTGGTGGT TGAGATTCCCACAAATCTGACAGAAAACGACACAAACCAGAAGCAAAATGAGTCGTCCACTACCTTTGAGATTGCGAAAA CCCGTGACCAAGGGCACTGTAAACTTTGTGACATTAAATTATCTTGTAGAACTGCAGTTGGCAGGTCTTTGGTATACAAA CCTGCAATGCTCTCCATGGTGGCAGTAGCAGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAAAGTTCACCTGAAGTTCT TTACATGTTCCGACCCTTCAGTTGGGAATCGTTGGATTTCGGAACAAGCTAA
Protein sequence (LotjaGi5g1v0240200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEARFGAEAYHYYGVGASSDMRGMGKRSAEWDLNNWRWDGDLFIASRVNPVQEDGVGQQLFPLVSGIPASNSSSSCSEEV DLRDPMGSREGERKRRVIVLEDDGLNEEGGTLSLKLGGHAADREVASWDGGNGKKSRVAGGGASNRAVCQVEDCCADLSR AKDYHRRHKVCEMHSKATRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNNEAVPNGNPLNDDQTS SYLLISLLKILSNMNSDRSDQTTDQDLLTHLLRSLASRNGEQGGNNLSNILREPENLLREGGSSRESEMVPTLLSNGSQG SPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDL ERLPGTTNHVTSSLDYPWTQQDSHQSSPPQTSRNSESGSAHSPSSSTGEAQCRTDRIVIKLFGKEPSDFPLILRAQILDW LSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNGQVVIDTSL PFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALEGKYLVCEDAHESMDQYSEELDGLHCIQFSCAVPVT NGRGFIEIEDQGLSSSFFPFIVAEEDVCSDICGLEPLLELSETDPDIEGTGKIKAKSQAMDFIHEIGWLLHGSQLKSRMV HLSSSTDLFPLKRFKWLMEFSMDHDWCAVVKKLLNLLLEGTVSTGDHPSLDLALSEMGLLHRAVRRNSKQLVELLLTYVP ENISNEVRPEGKALVEGEKQSFLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYA RLRGHYTYIHLVQKKINKRQGAPHVVVEIPTNLTENDTNQKQNESSTTFEIAKTRDQGHCKLCDIKLSCRTAVGRSLVYK PAMLSMVAVAAVCVCVALLFKSSPEVLYMFRPFSWESLDFGTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 956 | 956 | - | – | |
| PANTHER | 8 | 1003 | 996 | 0.0 | – | |
| PANTHER | 8 | 1003 | 996 | 0.0 | – | |
| MobiDBLite | 69 | 89 | 21 | - | – | |
| Gene3D | 139 | 210 | 72 | 7.2E-32 | ||
| ProSiteProfiles | 146 | 223 | 78 | 31.812 | ||
| SUPERFAMILY | 147 | 227 | 81 | 1.7E-36 | ||
| Pfam | 149 | 222 | 74 | 8.9E-28 | ||
| MobiDBLite | 213 | 236 | 24 | - | – | |
| MobiDBLite | 402 | 450 | 49 | - | – | |
| MobiDBLite | 405 | 450 | 46 | - | – | |
| Gene3D | 740 | 948 | 209 | 7.7E-10 | ||
| SUPERFAMILY | 776 | 892 | 117 | 1.2E-7 | ||
| Phobius | 957 | 980 | 24 | - | – | |
| TMHMM | 961 | 980 | 20 | - | – | |
| Phobius | 981 | 1003 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi5g1v0240200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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