Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0240200 |
| Transcript ID | LotjaGi5g1v0240200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Squamosa promoter-binding-like protein; TAIR: AT2G47070.1 squamosa promoter binding protein-like 1; Swiss-Prot: sp|Q9SMX9|SPL1_ARATH Squamosa promoter-binding-like protein 1; TrEMBL-Plants: tr|A0A0S3SQY1|A0A0S3SQY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0240200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54841761..54849563) extracted from Lotus japonicus Gifu genome v1.2.
ACAGCAACAACAACGTTTTCGTCCACAGAACCTGTTGCTATTTGCGTGTGTTCGCGATCTGCTTTCCTTGTAACGCTTAT CCTCTGACGTACGAGTACGATGATGTTTACCTTCAATCTCATCATTTTGCTGTTGAATTTTAGTTTAGTTTTCAATTTTC AGCTCAGCTAGGTTTCTGTTAATCTGTTTATGTAGGTAACTTGCCAAATTGGAAGACCTAGTTGATAGTTTCTAGTACTT GGCTATGAAGGTTGAGCCTAATTGGAACCATGGTTGCGTTAGGGGTGCACTTTCTGGACTCTTGGGGTTGAATTGAGGCT AATTGACTGTGATTCTGTGTTTTGTCAATTTCTTACTGTGACTTAATTTAGGTTAATTGGTTGTGAGTTGTGACGATGGA AGCTAGATTCGGTGCAGAAGCTTATCATTATTATGGTGTGGGTGCCTCTTCTGATATGAGGGGTATGGGGAAGAGGTCTG CTGAGTGGGATTTGAATAATTGGAGGTGGGATGGGGATCTGTTCATTGCTAGTAGGGTGAATCCAGTGCAGGAGGATGGG GTTGGTCAACAACTTTTCCCTCTTGTGTCCGGGATCCCAGCGTCGAATAGCTCTTCTTCGTGTTCTGAGGAGGTAGATCT TAGGGATCCCATGGGGAGTAGGGAAGGGGAGAGGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGAGGAAG GAGGTACGCTTAGCTTGAAGCTTGGTGGGCATGCTGCGGATAGGGAGGTTGCAAGCTGGGATGGGGGGAATGGGAAGAAG AGCAGAGTGGCTGGTGGGGGTGCTTCGAATCGCGCTGTTTGTCAGGTGGAGGACTGTTGTGCAGATCTGAGCAGGGCTAA GGATTATCACAGGCGTCATAAAGTTTGTGAGATGCACTCCAAGGCCACTAGGGCACTTGTCGGAAATGCAATGCAAAGGT TCTGTCAACAATGCAGCAGGTGAGTTTCCCTTCTAGATTGCTTTCCATTTTTGTTGTAGTTGATCAGTTTGGTATTGGTT TAAATTTATATGTCTATATATGAAATAAAGGTATTAATTATGACACTTAGATGTAATAAATTGATGAATATGGAAATTAT ATCTGAAATTCTGAATATAGAAGAAGATCATTATGGATTTCTTTTAGAGGTCCTTTATGCTATTGTTTGTTATACACTTT GACTCAAGCATTGAAAGTTTAAATTACTTCTTTTACTCCATCAATAGGTTTCACATGCTTCAAGAATTTGATGAAGGAAA GAGAAGCTGTCGAAGACGCTTGGCAGGCCATAATAAACGAAGAAGGAAAACAAATAATGAAGCTGTTCCTAATGGAAATC CTCTAAATGATGATCAAACTAGTAGTTATCTGTTGATAAGTTTGTTGAAGATACTTTCAAATATGAATTGTGAGTATCTC TTAAATCATGATTTTTATAACTAGAGCCTAGAGGAGTTGGTGGCATATAAATTGTTTTGTATGGCAATGATTGATGCTTG TTTCTCTTATTTCAAACAACAAAAGGCATATTATTAATTTAAACTAATACTTCTTATATATAACTGCTGTTGGTGGTGGA AGGTAGTAGTTTGGTCAGCTGCAAATATGGTTTATTAATACTGTATTTTGTCAGTAACTCTTAGTCTCTGAGAGAGAGGT TTCTTACTGAAGGTAAATCTGTATGTCCGGGTCCGGTTTTTCAAACAGAATCATTTCTAAGTAAGCCAACACACTGCTGC AGGAAATTAATTTTCTTAACTTCCATTTGACTTCATGTCGACTGATTAGTTTAGTAGGCTTTTCACTTAACTTCTATGAA AATAGTGTCAGATGGAAAACAAGAAGATTAATTTCCATCCTTGCTTTGTGGGGACTGAATGTTGAACTTGAAGGCTGGTT GATATGTAGGGAGTTTTTAAAAGAGGAAGAAACTGGATCTGACAGCTTAGAAGAGGAAAAATAAAATGATTTGACCTTGA ATTTGTGTGTTAGTCAACTTTACCTAGTGAGCTCTTATCAAGGTTAGTTTCCACTGTTAAGCATATTTAGGATTTTAGGT ACGTTGCTGGACAACACATGGAATAATATTCTTCAATTTTGATAAAAGATCCATTGCCTAGTCATTGAACTCCTAACAAA ATTGTATCAGTGGACCCTCGACCCTCATCAATGAATTTCCAACTCAAAAGTAAACTTGCTAGCACCTTGAAAAGTGGTCC TAAATCATTACTTTTGCTACTCATGAGTCATGAGTAACATTTACTTATAGCATATAAAATCAATTTTTAGTGCTTTAATT GTTGGTGTCAAGCATGATTGACTTTCAGTTTTCCTAGTGGTAATGAGTTGTTTTGTCAAATAATTTGTGTCTCATTGATA GGGTGACTTTGTGAACACATGTAAAATGCCCATGCATATACCAGTCAAGTATAGGATATATCCATCTTTTTCATGGGTTT TTCTAGAAACTAACATTGTGTTCATCTCTTTATTAAATTGGTCTGAGAGATCAATGGTTGACCTCTAAAAGGGGATCTAG GAGAGGGGTTACAATTTTAGCAGAAGTTATATTGAAAAAGATAAAGATACAAGGCCCTATAATAATATTTGTTCTCCTCC ATTGGGCAATAAATGCATTTCAGCAATTGGCATGCAATAAAATTTTAGGTGATCATAACAATATTTCATTTTAGGTGATC ATAAAATTTTAGGTCAATCTTGTGGGATGTTATGAACTTAGGAGACTTTTTTTTTTATAACAATGAGATACTTGAATTAT TACTGCAATTGGTGAAATTGCATTTTAGATAAATTCCTGTATTTGTTTCTCTGTTGGTCTTTCTTCTTTAACTGAGGTTT TTTGGGATGGATAATGACATGTTTAATGAATTTTAGCTGACAGATCGGATCAGACTACAGACCAGGATCTACTGACTCAT CTTCTAAGGAGTCTTGCTAGTCGGAATGGTGAACAAGGGGGCAATAACTTGTCTAACATTTTGCGAGAACCAGAGAATTT GTTGAGAGAAGGGGGTTCATCTAGGGAGTCAGAGATGGTGCCAACTTTACTCTCCAATGGTTCTCAAGGCTCTCCAACTG ATATAAGACAACATCAAACTGTATCTATGAATAAAATGCAACAAGAAGTGGTGCATGCACATGATGCTAGGGCTACTGAT CAGCAGCTCATGTCTTATATAAAGCCCAGCATTTCAAACACTCCTCCAGCTTACGCAGAAGCCAGAGACAGTACCGCTGG ACAAATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGACGATGGCATAGAAGATCTAGAAAGATTGC CTGGAACTACTAATCATGTCACTAGCTCTCTTGATTACCCATGGACACAACAAGATTCCCATCAGTCAAGTCCACCTCAG ACAAGTAGAAATTCAGAGTCTGGATCTGCCCACTCCCCTTCTAGTTCCACTGGAGAAGCTCAGGTATGTCCGATGCGCTT CATTATTTTGAATTGGCTGCTCTACTTGCAATTTTCAATACCTTCCTTGCACTCAAGTGCACAACTTGGCTCCTTGATTG TGTAACTTTGTATAGAAAATTGAGGATGTTTTACTGAAATTACCACAAGTCTGTTTGCGGTCTTGGTTATTAGACTTTTT TGGTGATGTCTTGACACACAATTCCATCTTGGTGGTATGACTATAAAAAATGAACTATTTCATTTAGTCATGCTCCGAAA GTAGCATTATCGTCATCTTTAATTGGTTTAGCTGCATGATTTCTGTGAAATATATGAAGAATGAAATTTGGTCTTTTTTT GTTTTGGGGGTGGGGTCCAGAGTTTTTTTATATATTTATTTGAAGGGGGGTTTTGAGACCTTGGGAGAGGATTGGAAAAG ACTGGCTTTGCATATTTGGAGGGATTGATCCCAGGATATTTGACCTCCACAGGAAACCATAGAAACTTTGATATGAATAT ATGAGTATTTTGATTTGATCACTCTAGTTCTTACTGGATGCGTCTCCAGTCTTTATGCTGCTTCATATAGTGTACTGTAT AGAAACACATATGCCTGCACAAATCCTGGTTTAAATAGCTTGTCTGGATTTAGCCTTTTATCCCCATTGACCTGTCTTGA GGATGCTTGATGGTGTTGTTGCATCCAGTAGTTATGGTAGTGAGAAAGATTCAGACAATGTTGGTCCTTCCTTAGGGTCA AATGTGATGCTGCTTGCTTAAGTAGTTAAGTTGCTGAGGCAAAAGTTTGAAAAACAAAAACAAATTGTCTGTATTCCTAT TAATTAATCATTGCCTGCCTTCATATATGGAATTTATGGTACTCACTGCTTCCAGTATTTGATTAAATAAGCTCTCATAG TCAAAACCCCACTCTCACAAAAAAAGGACTTTGGGAAAATATAACAGAATAAATCAATAACAATGGGGTAATTATTTCCC CTTTTCACCCAGGTTTTTGAACAATGCATTTTTTTGTTAAATTTATCATATATTGAAATTGTCATCATTTAACTGTTAAT TTTTTGTTTCCACGTTTCAGTGTCGCACAGATCGTATTGTTATCAAACTCTTTGGTAAAGAGCCGAGTGATTTTCCTCTT ATACTTAGAGCACAGGTACTTTAAGCTTTCTAAAGCAGCTACGAGTAACTGCTTTTCATTTGTTTCTCTCCAAATTTAAT CACACTGAGGATTTCAATTGCCAGATTCTTGACTGGTTATCACACAGTCCTACTGATATTGAAAGCTACATACGACCTGG TTGTATTGTTTTGACAATTTATCTGCGCCAGGCTGAAGCTGTTTGGGAGGAAGTAAGCTTTTTCTTCTTAAGTTATTGAC AAATGACCTGGGTGGTTATTTCTCTTTAAATTTGACTATCATGACCTGGTTGTTATTTTGCAGATTTGCTATGATCTGAC TTCTAGTTTGGGTAGGCTACTGGATGTCTCAGATGATACTTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCAGCATC AGATGGCATTCATTTTCAATGGTCTCTTACCTTATCTCTGTTGTTGTTACATATTAGGGGTCAGGATCATTGGAGTTTTC AGTAAATGAGTTCCATCAAATAAGCACATTAAGTCATTAACTGTTAAAATATTTGAAATCCTTGCTTTGATAAGTTGTCT ATATTAGAGACTTGTATCTACATCTAATTTATCTCCAAGCCACATTTATAAATTTGGTTGGTCGACTGCATTGAGGATTC ATGTAATTATAATACTATGCTTCATTGTCTACAATCTGCATTGTTATCATCGTTTACTATGTTTGTGCATGAAGTAACTA TATCATTCGGGACTAAAAGTATTTGTTTATATGGCTAGGTATCTTACTGCAATTTATATGCTGCAGGTCAAGTTGTCATC GATACATCACTACCTTTCAGAAGTAACAATTATAGCAAGATTTTGACTGTTAGTCCTATAGCTGCACCAGCATCAAAGAG AGTTCAATTTTCCGTTAAGGGTGTCAACATGATACGCCCTGCCACGAGGTAATCTCCATTGTTTTGTGACTTGTCAATCC TTTGCATGTAGATAGTTGAAAACAAAGTTTGAAAGTGACATGGATTGAAGTTTTATGATTTTATTTAGCTATATGTAATT TTGTTGGGCTAGTGTGTTACATGACCCTTAAATCTGTCTTCAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGGTCTGT GAAGATGCTCATGAGTCGATGGATCAATACTCCGAGGAGCTTGATGGACTTCATTGCATCCAGTTTTCTTGTGCTGTCCC TGTAACAAATGGAAGAGGATTTATTGAGGTGCTTTTACATAACTCTCAAATTATCAACAGAAAAAAGTAGGCAGGGATAA GAAAATTGTGCACTGATCACTGAAAATTGTACACTGCTTTTTCATCCACTTCATTTGTAATTCAATTAAGGGGATAAGGA AATTCCTCTGTTTATCCTACTTTATGGTACCCCTTTACACACACTGATCACTGTTGAGTGTTAGTGATATCCTTAGTCCT AACTCATAAGCTTTTTTGTCCAATTATTTTTTACATTCGCTTCCATTTGCCAGTTTTCCATATTGTTAACTGAAGACAAG GAACCCTATACTAATGCTGTGTCCGCGCTTCGTGTTTTTTAATTGCTAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTT TTCCTTTCATTGTTGCGGAGGAGGATGTTTGCTCAGATATCTGTGGGCTTGAGCCTCTACTAGAATTAAGTGAAACTGAT CCAGATATTGAAGGGACTGGAAAGATTAAAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATAGGTTGGCTCCTTCA TGGAAGCCAGTTGAAATCTAGGATGGTTCACTTAAGCTCCAGCACAGATCTCTTTCCATTGAAACGGTTCAAGTGGCTCA TGGAGTTCTCTATGGATCATGATTGGTGTGCAGTAGTGAAAAAACTGCTGAACCTACTGCTTGAGGGAACTGTCAGTACA GGAGATCACCCATCCCTGGATCTAGCACTTTCAGAGATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTT AGTGGAGCTGCTTTTGACATACGTTCCTGAAAATATCTCTAATGAAGTAAGACCTGAAGGCAAAGCACTGGTTGAGGGAG AGAAACAGAGCTTTTTGTTTAGACCTGATGCTGCCGGTCCTGCTGGTTTAACACCCCTTCATATAGCAGCTGGGAAAGAT GGTTCTGAGGATGTACTGGACGCTTTAACTAATGATCCTTGCATGGTAAAATTCCTACTAACTGCTATCTTAAATTATAC CAATCACCCTGAGAATCAATTTCCTTAAATATGTTATGCATCAAAATTGTTTTCCTATTCTGTCCTTTTGGAAATCATGT GGTCACGTTCGTGCTACATTTGTGACATGGGTTTTTAATACAGGTGGGAATTGAGGCATGGAAAAATGCTCGTGACAGCA CAGGCTCCACACCTGAGGATTATGCGCGTTTACGTGGCCACTATACTTACATTCACTTAGTGCAGAAAAAGATTAACAAG AGACAAGGAGCACCTCATGTGGTGGTTGAGATTCCCACAAATCTGACAGAAAACGACACAAACCAGAAGCAAAATGAGTC GTCCACTACCTTTGAGATTGCGAAAACCCGTGACCAAGGGCACTGTAAACTTTGTGACATTAAATTATCTTGTAGAACTG CAGTTGGCAGGTCTTTGGTATACAAACCTGCAATGCTCTCCATGGTGGCAGTAGCAGCAGTCTGTGTCTGTGTGGCCCTT CTGTTTAAAAGTTCACCTGAAGTTCTTTACATGTTCCGACCCTTCAGTTGGGAATCGTTGGATTTCGGAACAAGCTAAGG TTTATTAACTTGCACCTTTAATAAAACTCGATAGGTGTTGTATGAGGATGTTGTATTCATAGGCTGAATAACCGAGATTT CCTGTAGGACCGGTTCTCTGTATTGGCTAAACTGTGCTATATTACACGTATTTGTTATCCGTCAATGGACTGTCTTTGTA CAACTTTGTGCAATGTATGTGGACGCAACATTTTATGAAAGTTGAAGCACTCTGTTTAGGATCCTTTGTAGTTTAAGAGT TATACTTGTATGGAATATTCAACCTTGTCTTTGATTAATGACAAGGTTTTTTAGAAGGTAATTAAATTGAAATGGAGAAT GTAAAGGCTACTAGCATGTTTAATTTTGGCTAGCATTTGCGGG
CDS sequence (LotjaGi5g1v0240200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCTAGATTCGGTGCAGAAGCTTATCATTATTATGGTGTGGGTGCCTCTTCTGATATGAGGGGTATGGGGAAGAG GTCTGCTGAGTGGGATTTGAATAATTGGAGGTGGGATGGGGATCTGTTCATTGCTAGTAGGGTGAATCCAGTGCAGGAGG ATGGGGTTGGTCAACAACTTTTCCCTCTTGTGTCCGGGATCCCAGCGTCGAATAGCTCTTCTTCGTGTTCTGAGGAGGTA GATCTTAGGGATCCCATGGGGAGTAGGGAAGGGGAGAGGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGA GGAAGGAGGTACGCTTAGCTTGAAGCTTGGTGGGCATGCTGCGGATAGGGAGGTTGCAAGCTGGGATGGGGGGAATGGGA AGAAGAGCAGAGTGGCTGGTGGGGGTGCTTCGAATCGCGCTGTTTGTCAGGTGGAGGACTGTTGTGCAGATCTGAGCAGG GCTAAGGATTATCACAGGCGTCATAAAGTTTGTGAGATGCACTCCAAGGCCACTAGGGCACTTGTCGGAAATGCAATGCA AAGGTTCTGTCAACAATGCAGCAGGTTTCACATGCTTCAAGAATTTGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGG CAGGCCATAATAAACGAAGAAGGAAAACAAATAATGAAGCTGTTCCTAATGGAAATCCTCTAAATGATGATCAAACTAGT AGTTATCTGTTGATAAGTTTGTTGAAGATACTTTCAAATATGAATTCTGACAGATCGGATCAGACTACAGACCAGGATCT ACTGACTCATCTTCTAAGGAGTCTTGCTAGTCGGAATGGTGAACAAGGGGGCAATAACTTGTCTAACATTTTGCGAGAAC CAGAGAATTTGTTGAGAGAAGGGGGTTCATCTAGGGAGTCAGAGATGGTGCCAACTTTACTCTCCAATGGTTCTCAAGGC TCTCCAACTGATATAAGACAACATCAAACTGTATCTATGAATAAAATGCAACAAGAAGTGGTGCATGCACATGATGCTAG GGCTACTGATCAGCAGCTCATGTCTTATATAAAGCCCAGCATTTCAAACACTCCTCCAGCTTACGCAGAAGCCAGAGACA GTACCGCTGGACAAATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGACGATGGCATAGAAGATCTA GAAAGATTGCCTGGAACTACTAATCATGTCACTAGCTCTCTTGATTACCCATGGACACAACAAGATTCCCATCAGTCAAG TCCACCTCAGACAAGTAGAAATTCAGAGTCTGGATCTGCCCACTCCCCTTCTAGTTCCACTGGAGAAGCTCAGTGTCGCA CAGATCGTATTGTTATCAAACTCTTTGGTAAAGAGCCGAGTGATTTTCCTCTTATACTTAGAGCACAGATTCTTGACTGG TTATCACACAGTCCTACTGATATTGAAAGCTACATACGACCTGGTTGTATTGTTTTGACAATTTATCTGCGCCAGGCTGA AGCTGTTTGGGAGGAAATTTGCTATGATCTGACTTCTAGTTTGGGTAGGCTACTGGATGTCTCAGATGATACTTTTTGGA GAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCATTCATTTTCAATGGTCAAGTTGTCATCGATACATCACTA CCTTTCAGAAGTAACAATTATAGCAAGATTTTGACTGTTAGTCCTATAGCTGCACCAGCATCAAAGAGAGTTCAATTTTC CGTTAAGGGTGTCAACATGATACGCCCTGCCACGAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGGTCTGTGAAGATG CTCATGAGTCGATGGATCAATACTCCGAGGAGCTTGATGGACTTCATTGCATCCAGTTTTCTTGTGCTGTCCCTGTAACA AATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCATTGTTGCGGAGGAGGATGT TTGCTCAGATATCTGTGGGCTTGAGCCTCTACTAGAATTAAGTGAAACTGATCCAGATATTGAAGGGACTGGAAAGATTA AAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATAGGTTGGCTCCTTCATGGAAGCCAGTTGAAATCTAGGATGGTT CACTTAAGCTCCAGCACAGATCTCTTTCCATTGAAACGGTTCAAGTGGCTCATGGAGTTCTCTATGGATCATGATTGGTG TGCAGTAGTGAAAAAACTGCTGAACCTACTGCTTGAGGGAACTGTCAGTACAGGAGATCACCCATCCCTGGATCTAGCAC TTTCAGAGATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGCTGCTTTTGACATACGTTCCT GAAAATATCTCTAATGAAGTAAGACCTGAAGGCAAAGCACTGGTTGAGGGAGAGAAACAGAGCTTTTTGTTTAGACCTGA TGCTGCCGGTCCTGCTGGTTTAACACCCCTTCATATAGCAGCTGGGAAAGATGGTTCTGAGGATGTACTGGACGCTTTAA CTAATGATCCTTGCATGGTGGGAATTGAGGCATGGAAAAATGCTCGTGACAGCACAGGCTCCACACCTGAGGATTATGCG CGTTTACGTGGCCACTATACTTACATTCACTTAGTGCAGAAAAAGATTAACAAGAGACAAGGAGCACCTCATGTGGTGGT TGAGATTCCCACAAATCTGACAGAAAACGACACAAACCAGAAGCAAAATGAGTCGTCCACTACCTTTGAGATTGCGAAAA CCCGTGACCAAGGGCACTGTAAACTTTGTGACATTAAATTATCTTGTAGAACTGCAGTTGGCAGGTCTTTGGTATACAAA CCTGCAATGCTCTCCATGGTGGCAGTAGCAGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAAAGTTCACCTGAAGTTCT TTACATGTTCCGACCCTTCAGTTGGGAATCGTTGGATTTCGGAACAAGCTAA
Protein sequence (LotjaGi5g1v0240200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEARFGAEAYHYYGVGASSDMRGMGKRSAEWDLNNWRWDGDLFIASRVNPVQEDGVGQQLFPLVSGIPASNSSSSCSEEV DLRDPMGSREGERKRRVIVLEDDGLNEEGGTLSLKLGGHAADREVASWDGGNGKKSRVAGGGASNRAVCQVEDCCADLSR AKDYHRRHKVCEMHSKATRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNNEAVPNGNPLNDDQTS SYLLISLLKILSNMNSDRSDQTTDQDLLTHLLRSLASRNGEQGGNNLSNILREPENLLREGGSSRESEMVPTLLSNGSQG SPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDL ERLPGTTNHVTSSLDYPWTQQDSHQSSPPQTSRNSESGSAHSPSSSTGEAQCRTDRIVIKLFGKEPSDFPLILRAQILDW LSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNGQVVIDTSL PFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALEGKYLVCEDAHESMDQYSEELDGLHCIQFSCAVPVT NGRGFIEIEDQGLSSSFFPFIVAEEDVCSDICGLEPLLELSETDPDIEGTGKIKAKSQAMDFIHEIGWLLHGSQLKSRMV HLSSSTDLFPLKRFKWLMEFSMDHDWCAVVKKLLNLLLEGTVSTGDHPSLDLALSEMGLLHRAVRRNSKQLVELLLTYVP ENISNEVRPEGKALVEGEKQSFLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYA RLRGHYTYIHLVQKKINKRQGAPHVVVEIPTNLTENDTNQKQNESSTTFEIAKTRDQGHCKLCDIKLSCRTAVGRSLVYK PAMLSMVAVAAVCVCVALLFKSSPEVLYMFRPFSWESLDFGTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 956 | 956 | - | – | |
| PANTHER | 8 | 1003 | 996 | 0.0 | – | |
| PANTHER | 8 | 1003 | 996 | 0.0 | – | |
| MobiDBLite | 69 | 89 | 21 | - | – | |
| Gene3D | 139 | 210 | 72 | 7.2E-32 | ||
| ProSiteProfiles | 146 | 223 | 78 | 31.812 | ||
| SUPERFAMILY | 147 | 227 | 81 | 1.7E-36 | ||
| Pfam | 149 | 222 | 74 | 8.9E-28 | ||
| MobiDBLite | 213 | 236 | 24 | - | – | |
| MobiDBLite | 402 | 450 | 49 | - | – | |
| MobiDBLite | 405 | 450 | 46 | - | – | |
| Gene3D | 740 | 948 | 209 | 7.7E-10 | ||
| SUPERFAMILY | 776 | 892 | 117 | 1.2E-7 | ||
| Phobius | 957 | 980 | 24 | - | – | |
| TMHMM | 961 | 980 | 20 | - | – | |
| Phobius | 981 | 1003 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi5g1v0240200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…