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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0240200 |
| Transcript ID | LotjaGi5g1v0240200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Squamosa promoter-binding-like protein; TAIR: AT2G47070.1 squamosa promoter binding protein-like 1; Swiss-Prot: sp|Q9SMX9|SPL1_ARATH Squamosa promoter-binding-like protein 1; TrEMBL-Plants: tr|A0A0S3SQY1|A0A0S3SQY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0240200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54842156..54849198) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGCTAGATTCGGTGCAGAAGCTTATCATTATTATGGTGTGGGTGCCTCTTCTGATATGAGGGGTATGGGGAAGAG GTCTGCTGAGTGGGATTTGAATAATTGGAGGTGGGATGGGGATCTGTTCATTGCTAGTAGGGTGAATCCAGTGCAGGAGG ATGGGGTTGGTCAACAACTTTTCCCTCTTGTGTCCGGGATCCCAGCGTCGAATAGCTCTTCTTCGTGTTCTGAGGAGGTA GATCTTAGGGATCCCATGGGGAGTAGGGAAGGGGAGAGGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGA GGAAGGAGGTACGCTTAGCTTGAAGCTTGGTGGGCATGCTGCGGATAGGGAGGTTGCAAGCTGGGATGGGGGGAATGGGA AGAAGAGCAGAGTGGCTGGTGGGGGTGCTTCGAATCGCGCTGTTTGTCAGGTGGAGGACTGTTGTGCAGATCTGAGCAGG GCTAAGGATTATCACAGGCGTCATAAAGTTTGTGAGATGCACTCCAAGGCCACTAGGGCACTTGTCGGAAATGCAATGCA AAGGTTCTGTCAACAATGCAGCAGGTGAGTTTCCCTTCTAGATTGCTTTCCATTTTTGTTGTAGTTGATCAGTTTGGTAT TGGTTTAAATTTATATGTCTATATATGAAATAAAGGTATTAATTATGACACTTAGATGTAATAAATTGATGAATATGGAA ATTATATCTGAAATTCTGAATATAGAAGAAGATCATTATGGATTTCTTTTAGAGGTCCTTTATGCTATTGTTTGTTATAC ACTTTGACTCAAGCATTGAAAGTTTAAATTACTTCTTTTACTCCATCAATAGGTTTCACATGCTTCAAGAATTTGATGAA GGAAAGAGAAGCTGTCGAAGACGCTTGGCAGGCCATAATAAACGAAGAAGGAAAACAAATAATGAAGCTGTTCCTAATGG AAATCCTCTAAATGATGATCAAACTAGTAGTTATCTGTTGATAAGTTTGTTGAAGATACTTTCAAATATGAATTGTGAGT ATCTCTTAAATCATGATTTTTATAACTAGAGCCTAGAGGAGTTGGTGGCATATAAATTGTTTTGTATGGCAATGATTGAT GCTTGTTTCTCTTATTTCAAACAACAAAAGGCATATTATTAATTTAAACTAATACTTCTTATATATAACTGCTGTTGGTG GTGGAAGGTAGTAGTTTGGTCAGCTGCAAATATGGTTTATTAATACTGTATTTTGTCAGTAACTCTTAGTCTCTGAGAGA GAGGTTTCTTACTGAAGGTAAATCTGTATGTCCGGGTCCGGTTTTTCAAACAGAATCATTTCTAAGTAAGCCAACACACT GCTGCAGGAAATTAATTTTCTTAACTTCCATTTGACTTCATGTCGACTGATTAGTTTAGTAGGCTTTTCACTTAACTTCT ATGAAAATAGTGTCAGATGGAAAACAAGAAGATTAATTTCCATCCTTGCTTTGTGGGGACTGAATGTTGAACTTGAAGGC TGGTTGATATGTAGGGAGTTTTTAAAAGAGGAAGAAACTGGATCTGACAGCTTAGAAGAGGAAAAATAAAATGATTTGAC CTTGAATTTGTGTGTTAGTCAACTTTACCTAGTGAGCTCTTATCAAGGTTAGTTTCCACTGTTAAGCATATTTAGGATTT TAGGTACGTTGCTGGACAACACATGGAATAATATTCTTCAATTTTGATAAAAGATCCATTGCCTAGTCATTGAACTCCTA ACAAAATTGTATCAGTGGACCCTCGACCCTCATCAATGAATTTCCAACTCAAAAGTAAACTTGCTAGCACCTTGAAAAGT GGTCCTAAATCATTACTTTTGCTACTCATGAGTCATGAGTAACATTTACTTATAGCATATAAAATCAATTTTTAGTGCTT TAATTGTTGGTGTCAAGCATGATTGACTTTCAGTTTTCCTAGTGGTAATGAGTTGTTTTGTCAAATAATTTGTGTCTCAT TGATAGGGTGACTTTGTGAACACATGTAAAATGCCCATGCATATACCAGTCAAGTATAGGATATATCCATCTTTTTCATG GGTTTTTCTAGAAACTAACATTGTGTTCATCTCTTTATTAAATTGGTCTGAGAGATCAATGGTTGACCTCTAAAAGGGGA TCTAGGAGAGGGGTTACAATTTTAGCAGAAGTTATATTGAAAAAGATAAAGATACAAGGCCCTATAATAATATTTGTTCT CCTCCATTGGGCAATAAATGCATTTCAGCAATTGGCATGCAATAAAATTTTAGGTGATCATAACAATATTTCATTTTAGG TGATCATAAAATTTTAGGTCAATCTTGTGGGATGTTATGAACTTAGGAGACTTTTTTTTTTATAACAATGAGATACTTGA ATTATTACTGCAATTGGTGAAATTGCATTTTAGATAAATTCCTGTATTTGTTTCTCTGTTGGTCTTTCTTCTTTAACTGA GGTTTTTTGGGATGGATAATGACATGTTTAATGAATTTTAGCTGACAGATCGGATCAGACTACAGACCAGGATCTACTGA CTCATCTTCTAAGGAGTCTTGCTAGTCGGAATGGTGAACAAGGGGGCAATAACTTGTCTAACATTTTGCGAGAACCAGAG AATTTGTTGAGAGAAGGGGGTTCATCTAGGGAGTCAGAGATGGTGCCAACTTTACTCTCCAATGGTTCTCAAGGCTCTCC AACTGATATAAGACAACATCAAACTGTATCTATGAATAAAATGCAACAAGAAGTGGTGCATGCACATGATGCTAGGGCTA CTGATCAGCAGCTCATGTCTTATATAAAGCCCAGCATTTCAAACACTCCTCCAGCTTACGCAGAAGCCAGAGACAGTACC GCTGGACAAATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGACGATGGCATAGAAGATCTAGAAAG ATTGCCTGGAACTACTAATCATGTCACTAGCTCTCTTGATTACCCATGGACACAACAAGATTCCCATCAGTCAAGTCCAC CTCAGACAAGTAGAAATTCAGAGTCTGGATCTGCCCACTCCCCTTCTAGTTCCACTGGAGAAGCTCAGGTATGTCCGATG CGCTTCATTATTTTGAATTGGCTGCTCTACTTGCAATTTTCAATACCTTCCTTGCACTCAAGTGCACAACTTGGCTCCTT GATTGTGTAACTTTGTATAGAAAATTGAGGATGTTTTACTGAAATTACCACAAGTCTGTTTGCGGTCTTGGTTATTAGAC TTTTTTGGTGATGTCTTGACACACAATTCCATCTTGGTGGTATGACTATAAAAAATGAACTATTTCATTTAGTCATGCTC CGAAAGTAGCATTATCGTCATCTTTAATTGGTTTAGCTGCATGATTTCTGTGAAATATATGAAGAATGAAATTTGGTCTT TTTTTGTTTTGGGGGTGGGGTCCAGAGTTTTTTTATATATTTATTTGAAGGGGGGTTTTGAGACCTTGGGAGAGGATTGG AAAAGACTGGCTTTGCATATTTGGAGGGATTGATCCCAGGATATTTGACCTCCACAGGAAACCATAGAAACTTTGATATG AATATATGAGTATTTTGATTTGATCACTCTAGTTCTTACTGGATGCGTCTCCAGTCTTTATGCTGCTTCATATAGTGTAC TGTATAGAAACACATATGCCTGCACAAATCCTGGTTTAAATAGCTTGTCTGGATTTAGCCTTTTATCCCCATTGACCTGT CTTGAGGATGCTTGATGGTGTTGTTGCATCCAGTAGTTATGGTAGTGAGAAAGATTCAGACAATGTTGGTCCTTCCTTAG GGTCAAATGTGATGCTGCTTGCTTAAGTAGTTAAGTTGCTGAGGCAAAAGTTTGAAAAACAAAAACAAATTGTCTGTATT CCTATTAATTAATCATTGCCTGCCTTCATATATGGAATTTATGGTACTCACTGCTTCCAGTATTTGATTAAATAAGCTCT CATAGTCAAAACCCCACTCTCACAAAAAAAGGACTTTGGGAAAATATAACAGAATAAATCAATAACAATGGGGTAATTAT TTCCCCTTTTCACCCAGGTTTTTGAACAATGCATTTTTTTGTTAAATTTATCATATATTGAAATTGTCATCATTTAACTG TTAATTTTTTGTTTCCACGTTTCAGTGTCGCACAGATCGTATTGTTATCAAACTCTTTGGTAAAGAGCCGAGTGATTTTC CTCTTATACTTAGAGCACAGGTACTTTAAGCTTTCTAAAGCAGCTACGAGTAACTGCTTTTCATTTGTTTCTCTCCAAAT TTAATCACACTGAGGATTTCAATTGCCAGATTCTTGACTGGTTATCACACAGTCCTACTGATATTGAAAGCTACATACGA CCTGGTTGTATTGTTTTGACAATTTATCTGCGCCAGGCTGAAGCTGTTTGGGAGGAAGTAAGCTTTTTCTTCTTAAGTTA TTGACAAATGACCTGGGTGGTTATTTCTCTTTAAATTTGACTATCATGACCTGGTTGTTATTTTGCAGATTTGCTATGAT CTGACTTCTAGTTTGGGTAGGCTACTGGATGTCTCAGATGATACTTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCA GCATCAGATGGCATTCATTTTCAATGGTCTCTTACCTTATCTCTGTTGTTGTTACATATTAGGGGTCAGGATCATTGGAG TTTTCAGTAAATGAGTTCCATCAAATAAGCACATTAAGTCATTAACTGTTAAAATATTTGAAATCCTTGCTTTGATAAGT TGTCTATATTAGAGACTTGTATCTACATCTAATTTATCTCCAAGCCACATTTATAAATTTGGTTGGTCGACTGCATTGAG GATTCATGTAATTATAATACTATGCTTCATTGTCTACAATCTGCATTGTTATCATCGTTTACTATGTTTGTGCATGAAGT AACTATATCATTCGGGACTAAAAGTATTTGTTTATATGGCTAGGTATCTTACTGCAATTTATATGCTGCAGGTCAAGTTG TCATCGATACATCACTACCTTTCAGAAGTAACAATTATAGCAAGATTTTGACTGTTAGTCCTATAGCTGCACCAGCATCA AAGAGAGTTCAATTTTCCGTTAAGGGTGTCAACATGATACGCCCTGCCACGAGGTAATCTCCATTGTTTTGTGACTTGTC AATCCTTTGCATGTAGATAGTTGAAAACAAAGTTTGAAAGTGACATGGATTGAAGTTTTATGATTTTATTTAGCTATATG TAATTTTGTTGGGCTAGTGTGTTACATGACCCTTAAATCTGTCTTCAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGG TCTGTGAAGATGCTCATGAGTCGATGGATCAATACTCCGAGGAGCTTGATGGACTTCATTGCATCCAGTTTTCTTGTGCT GTCCCTGTAACAAATGGAAGAGGATTTATTGAGGTGCTTTTACATAACTCTCAAATTATCAACAGAAAAAAGTAGGCAGG GATAAGAAAATTGTGCACTGATCACTGAAAATTGTACACTGCTTTTTCATCCACTTCATTTGTAATTCAATTAAGGGGAT AAGGAAATTCCTCTGTTTATCCTACTTTATGGTACCCCTTTACACACACTGATCACTGTTGAGTGTTAGTGATATCCTTA GTCCTAACTCATAAGCTTTTTTGTCCAATTATTTTTTACATTCGCTTCCATTTGCCAGTTTTCCATATTGTTAACTGAAG ACAAGGAACCCTATACTAATGCTGTGTCCGCGCTTCGTGTTTTTTAATTGCTAGATTGAGGACCAGGGTTTGAGTAGCAG CTTTTTTCCTTTCATTGTTGCGGAGGAGGATGTTTGCTCAGATATCTGTGGGCTTGAGCCTCTACTAGAATTAAGTGAAA CTGATCCAGATATTGAAGGGACTGGAAAGATTAAAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATAGGTTGGCTC CTTCATGGAAGCCAGTTGAAATCTAGGATGGTTCACTTAAGCTCCAGCACAGATCTCTTTCCATTGAAACGGTTCAAGTG GCTCATGGAGTTCTCTATGGATCATGATTGGTGTGCAGTAGTGAAAAAACTGCTGAACCTACTGCTTGAGGGAACTGTCA GTACAGGAGATCACCCATCCCTGGATCTAGCACTTTCAGAGATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAG CAGTTAGTGGAGCTGCTTTTGACATACGTTCCTGAAAATATCTCTAATGAAGTAAGACCTGAAGGCAAAGCACTGGTTGA GGGAGAGAAACAGAGCTTTTTGTTTAGACCTGATGCTGCCGGTCCTGCTGGTTTAACACCCCTTCATATAGCAGCTGGGA AAGATGGTTCTGAGGATGTACTGGACGCTTTAACTAATGATCCTTGCATGGTAAAATTCCTACTAACTGCTATCTTAAAT TATACCAATCACCCTGAGAATCAATTTCCTTAAATATGTTATGCATCAAAATTGTTTTCCTATTCTGTCCTTTTGGAAAT CATGTGGTCACGTTCGTGCTACATTTGTGACATGGGTTTTTAATACAGGTGGGAATTGAGGCATGGAAAAATGCTCGTGA CAGCACAGGCTCCACACCTGAGGATTATGCGCGTTTACGTGGCCACTATACTTACATTCACTTAGTGCAGAAAAAGATTA ACAAGAGACAAGGAGCACCTCATGTGGTGGTTGAGATTCCCACAAATCTGACAGAAAACGACACAAACCAGAAGCAAAAT GAGTCGTCCACTACCTTTGAGATTGCGAAAACCCGTGACCAAGGGCACTGTAAACTTTGTGACATTAAATTATCTTGTAG AACTGCAGTTGGCAGGTCTTTGGTATACAAACCTGCAATGCTCTCCATGGTGGCAGTAGCAGCAGTCTGTGTCTGTGTGG CCCTTCTGTTTAAAAGTTCACCTGAAGTTCTTTACATGTTCCGACCCTTCAGTTGGGAATCGTTGGATTTCGGAACAAGC TAA
CDS sequence (LotjaGi5g1v0240200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCTAGATTCGGTGCAGAAGCTTATCATTATTATGGTGTGGGTGCCTCTTCTGATATGAGGGGTATGGGGAAGAG GTCTGCTGAGTGGGATTTGAATAATTGGAGGTGGGATGGGGATCTGTTCATTGCTAGTAGGGTGAATCCAGTGCAGGAGG ATGGGGTTGGTCAACAACTTTTCCCTCTTGTGTCCGGGATCCCAGCGTCGAATAGCTCTTCTTCGTGTTCTGAGGAGGTA GATCTTAGGGATCCCATGGGGAGTAGGGAAGGGGAGAGGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGA GGAAGGAGGTACGCTTAGCTTGAAGCTTGGTGGGCATGCTGCGGATAGGGAGGTTGCAAGCTGGGATGGGGGGAATGGGA AGAAGAGCAGAGTGGCTGGTGGGGGTGCTTCGAATCGCGCTGTTTGTCAGGTGGAGGACTGTTGTGCAGATCTGAGCAGG GCTAAGGATTATCACAGGCGTCATAAAGTTTGTGAGATGCACTCCAAGGCCACTAGGGCACTTGTCGGAAATGCAATGCA AAGGTTCTGTCAACAATGCAGCAGGTTTCACATGCTTCAAGAATTTGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGG CAGGCCATAATAAACGAAGAAGGAAAACAAATAATGAAGCTGTTCCTAATGGAAATCCTCTAAATGATGATCAAACTAGT AGTTATCTGTTGATAAGTTTGTTGAAGATACTTTCAAATATGAATTCTGACAGATCGGATCAGACTACAGACCAGGATCT ACTGACTCATCTTCTAAGGAGTCTTGCTAGTCGGAATGGTGAACAAGGGGGCAATAACTTGTCTAACATTTTGCGAGAAC CAGAGAATTTGTTGAGAGAAGGGGGTTCATCTAGGGAGTCAGAGATGGTGCCAACTTTACTCTCCAATGGTTCTCAAGGC TCTCCAACTGATATAAGACAACATCAAACTGTATCTATGAATAAAATGCAACAAGAAGTGGTGCATGCACATGATGCTAG GGCTACTGATCAGCAGCTCATGTCTTATATAAAGCCCAGCATTTCAAACACTCCTCCAGCTTACGCAGAAGCCAGAGACA GTACCGCTGGACAAATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGACGATGGCATAGAAGATCTA GAAAGATTGCCTGGAACTACTAATCATGTCACTAGCTCTCTTGATTACCCATGGACACAACAAGATTCCCATCAGTCAAG TCCACCTCAGACAAGTAGAAATTCAGAGTCTGGATCTGCCCACTCCCCTTCTAGTTCCACTGGAGAAGCTCAGTGTCGCA CAGATCGTATTGTTATCAAACTCTTTGGTAAAGAGCCGAGTGATTTTCCTCTTATACTTAGAGCACAGATTCTTGACTGG TTATCACACAGTCCTACTGATATTGAAAGCTACATACGACCTGGTTGTATTGTTTTGACAATTTATCTGCGCCAGGCTGA AGCTGTTTGGGAGGAAATTTGCTATGATCTGACTTCTAGTTTGGGTAGGCTACTGGATGTCTCAGATGATACTTTTTGGA GAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCATTCATTTTCAATGGTCAAGTTGTCATCGATACATCACTA CCTTTCAGAAGTAACAATTATAGCAAGATTTTGACTGTTAGTCCTATAGCTGCACCAGCATCAAAGAGAGTTCAATTTTC CGTTAAGGGTGTCAACATGATACGCCCTGCCACGAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGGTCTGTGAAGATG CTCATGAGTCGATGGATCAATACTCCGAGGAGCTTGATGGACTTCATTGCATCCAGTTTTCTTGTGCTGTCCCTGTAACA AATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCATTGTTGCGGAGGAGGATGT TTGCTCAGATATCTGTGGGCTTGAGCCTCTACTAGAATTAAGTGAAACTGATCCAGATATTGAAGGGACTGGAAAGATTA AAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATAGGTTGGCTCCTTCATGGAAGCCAGTTGAAATCTAGGATGGTT CACTTAAGCTCCAGCACAGATCTCTTTCCATTGAAACGGTTCAAGTGGCTCATGGAGTTCTCTATGGATCATGATTGGTG TGCAGTAGTGAAAAAACTGCTGAACCTACTGCTTGAGGGAACTGTCAGTACAGGAGATCACCCATCCCTGGATCTAGCAC TTTCAGAGATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGCTGCTTTTGACATACGTTCCT GAAAATATCTCTAATGAAGTAAGACCTGAAGGCAAAGCACTGGTTGAGGGAGAGAAACAGAGCTTTTTGTTTAGACCTGA TGCTGCCGGTCCTGCTGGTTTAACACCCCTTCATATAGCAGCTGGGAAAGATGGTTCTGAGGATGTACTGGACGCTTTAA CTAATGATCCTTGCATGGTGGGAATTGAGGCATGGAAAAATGCTCGTGACAGCACAGGCTCCACACCTGAGGATTATGCG CGTTTACGTGGCCACTATACTTACATTCACTTAGTGCAGAAAAAGATTAACAAGAGACAAGGAGCACCTCATGTGGTGGT TGAGATTCCCACAAATCTGACAGAAAACGACACAAACCAGAAGCAAAATGAGTCGTCCACTACCTTTGAGATTGCGAAAA CCCGTGACCAAGGGCACTGTAAACTTTGTGACATTAAATTATCTTGTAGAACTGCAGTTGGCAGGTCTTTGGTATACAAA CCTGCAATGCTCTCCATGGTGGCAGTAGCAGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAAAGTTCACCTGAAGTTCT TTACATGTTCCGACCCTTCAGTTGGGAATCGTTGGATTTCGGAACAAGCTAA
Protein sequence (LotjaGi5g1v0240200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEARFGAEAYHYYGVGASSDMRGMGKRSAEWDLNNWRWDGDLFIASRVNPVQEDGVGQQLFPLVSGIPASNSSSSCSEEV DLRDPMGSREGERKRRVIVLEDDGLNEEGGTLSLKLGGHAADREVASWDGGNGKKSRVAGGGASNRAVCQVEDCCADLSR AKDYHRRHKVCEMHSKATRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNNEAVPNGNPLNDDQTS SYLLISLLKILSNMNSDRSDQTTDQDLLTHLLRSLASRNGEQGGNNLSNILREPENLLREGGSSRESEMVPTLLSNGSQG SPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDL ERLPGTTNHVTSSLDYPWTQQDSHQSSPPQTSRNSESGSAHSPSSSTGEAQCRTDRIVIKLFGKEPSDFPLILRAQILDW LSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNGQVVIDTSL PFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALEGKYLVCEDAHESMDQYSEELDGLHCIQFSCAVPVT NGRGFIEIEDQGLSSSFFPFIVAEEDVCSDICGLEPLLELSETDPDIEGTGKIKAKSQAMDFIHEIGWLLHGSQLKSRMV HLSSSTDLFPLKRFKWLMEFSMDHDWCAVVKKLLNLLLEGTVSTGDHPSLDLALSEMGLLHRAVRRNSKQLVELLLTYVP ENISNEVRPEGKALVEGEKQSFLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYA RLRGHYTYIHLVQKKINKRQGAPHVVVEIPTNLTENDTNQKQNESSTTFEIAKTRDQGHCKLCDIKLSCRTAVGRSLVYK PAMLSMVAVAAVCVCVALLFKSSPEVLYMFRPFSWESLDFGTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 956 | 956 | - | – | |
| PANTHER | 8 | 1003 | 996 | 0.0 | – | |
| PANTHER | 8 | 1003 | 996 | 0.0 | – | |
| MobiDBLite | 69 | 89 | 21 | - | – | |
| Gene3D | 139 | 210 | 72 | 7.2E-32 | ||
| ProSiteProfiles | 146 | 223 | 78 | 31.812 | ||
| SUPERFAMILY | 147 | 227 | 81 | 1.7E-36 | ||
| Pfam | 149 | 222 | 74 | 8.9E-28 | ||
| MobiDBLite | 213 | 236 | 24 | - | – | |
| MobiDBLite | 402 | 450 | 49 | - | – | |
| MobiDBLite | 405 | 450 | 46 | - | – | |
| Gene3D | 740 | 948 | 209 | 7.7E-10 | ||
| SUPERFAMILY | 776 | 892 | 117 | 1.2E-7 | ||
| Phobius | 957 | 980 | 24 | - | – | |
| TMHMM | 961 | 980 | 20 | - | – | |
| Phobius | 981 | 1003 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi5g1v0240200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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