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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0246100 |
| Transcript ID | LotjaGi5g1v0246100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DnaJ; TAIR: AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog; TrEMBL-Plants: tr|G7IDS2|G7IDS2_MEDTR DNAJ heat shock amino-terminal domain protein; Found in the gene: LotjaGi5g1v0246100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55459032..55462352) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATCATAATATAGGTAGTGTGAGAGAGAATCTATGGTGTGTTGCCAGCTAGCTTTGAGAATGAAGGTTGAAAGCTT TACATAAGGGTTAATGTTGTCAATATCTCAAGGGTTTCATTTTTTTTTTTCCTCCCTTATAAGCTCATATAAAATCCCTC ATTTGTGACTCACTACCTCTACATTGTCCCATTCTCTCTCTCTAAACTCCCTCATTTTCCTCCCTATACATTTCTCTCCC TTCCAAGGGAAGACAATGCTATAACTGCTTCAGCTTGTTGGAGAAGACACAAAGTGTGTTTGGTGCTTCATATCTTGATG ATCCAAGGCTGAATCTTCCTCCAAGCACCACTCCCCACTCTCCACCACCAACAATGGCTGTCACCACCCCCTATTTCAAT CCTACAGAGAAAAAACACTGGTGGCTCACCAATCGTAAGGTAACAAACTGAAACAGATTGATTCAAACACCACAACATTT ATTTTTGTCTTTTAAGGTTTTTATTTCTACATTTCTGAATTCTGAATGATTTTATTTCTATAATGGTGTAGCTTGTTGAG AAATATATCAGAGAGGCACGCAGCCTCATCGCGACGCAGGAACATAGCGAGATCACTTCAGCTGTGAGCCTTCTAGACGC GGCTTTGGCGATCTCTCCGCGGCTAGACCAAGCGCTTGAGCTCAGAGCGAGGTCTCTGCTCTTCCTGCGGCGGTTCAAGG ATGTCGCCGACATGCTTCAAGACTATATTCCCAGCCTCAAGATGGCGATGGCAGCGAGTGATGACTCAGGCTCTGTTTCT TCTGAAGTTTCTTCGTCTCAGCAGCTTTCTAGAGAAGGTGTGAAGCTTCTTTCTTCATCAACATCGGATTCCTCTGTTCA GGAACAGAGTTTCAAGTGCTTCTCTGTTTCTGATTTGAAGAAAAGAGTCATGGCTGGGCTCTGTAAAAGTTTTGATAAAG AAGGGTATTGGAGGTAAGAAAGGAAATATAGGAATCAATTGCCATTTATGATGATTTATTGGTTTTGCTATCTGTCCCCT GTTTCTGGATTGAAAATGCACCTTCTCTTCCACCTTTAGGGGTTCAGCTTTTATTTTTAATTAATGACTTCATGTCTTCA TCTTCAAGTTTCAACAAGATCCATGGGGTTTCAGTAAATGCTGGTGCCAGCTATTATTTCAAGAATTGAATATTTTTCCC AACTCTTACTTTTAATTTATTCAATGCCCATCAAAAGTCATAGAAATAAAATATTATGGTAAAATGGTCCACAAATTTCA ACTAGTTTGGTTGGATTTTACATTGAATAATGATTTCTTGGATAGGGAAAAATGAGTGCATAACATAACATGTGATGGGA CAAAAAATATAAAAAAGATATAAATTAAAAAATAAATAGAAATGTGATGAATAAATCATTTCATTCATCACATTATACAC ACACCGGTCTATTTATGTAAACTCTTTTTCTAGCACTCCCTTCAATGTTCTTTTATTGATCGGTTAAAATTTAAGTGAAG TTCACTAAAAATATGAACTCATGTGAATTTCAATCCATATGAAAGAGTTTTGAAGAGAGTGTTGGCAAGTGAGTATTGAA TCAATGATTGAATTTTATTTTCCAATATTGATTATGTGATGTTGATGATGATGTTAATTGCATACAGATACTTGGTTTTG GGCAAAGCATGCTGCCACTTAGGCCTAATGGAGGATGCAATGGTTCTACTACAAACCGGAAAACGCCTAGCAAGTGCGGC GTTCCGCCGCGAGAGCGTGTGCTGGTCGGACGACAGCTTCTCACTCTGGACCACCACACCGTTCTCCGGCGACTCCACCA CCGCAGCCACCACCCCACCCCGCGCCCCTCTAACAGAGTCCGAATCCGTCACACAACTCCTAGCCCACATCAAGTTCCTC CTCCGCCGCCGCGCCGCCGCAATGGCCGCCCTCGACGCAGGCCTCCACTCGGAGGCCATCCGACACTTCTCAAAAATCCT CGACGGCCGCCGCGGCGCTCCACAAGGCTTCCTCGCCGAGTGCTACCTTCACAGAGCCACCGCATTCCGCTCTGCAGGCC GAATCGCCGACTCAATCGCCGATTGCAACCGAACCTTAGCACTGGACCCAGCCTGCATCCAAGCACTCGAAGCCAGAGCT TCCCTTCTCGAATCAATTCGCTGCTACCCAGATTGCTTGCACGACCTCGAGCATCTCAAGCTTCTCTACAACTCCATCTT ACGTGACAGAAAACTCGCCGGCCCTATCTGGAAGCGGCACAACATCCGCTACGGCGAGATTCCGGGGAAGCTCTGCACCC TCGCCGTGAAATCTCAACAACTAAAGCAGAGAGTCGCTGCTGGAGAAACCAGAAACGTTGACTACCACGCTCTGATCGGG TTACGACGCGGGTGTGGGAAATCAGAGTTGCAGAGAGCTCATCTGTTACTCTGTTTGAAGCACAAGCCGGACAAATCCAC CGGGTTCATCGAACGGTGCGAGCTAGCCGATGAACGTGACCTTGAATCGGTTAGAGACAGGGCGAGGATGTCAGCGTTGT TGCTGTATAGATTGATTCAGAAGGGTTATAGCAGTGTGAATGGTGTGATTGTGGAGGAAGAGAATGCTGAGAAACAGAGG AAGATGAATGTGGTGCAAAAAACAGCAAATGCTGTGGTTCAAGTGCAACATAAGATTCAGATGAAAACAGATGAAGTGAA GATTGATGATTATAATGGTAATAAGCCTGATAAGTTGGTATATGAGTCAAGGAAATGTGCTGCTTCTTCACCTTCGATTG TGAATCCCTCTGCTTTTCAAGGTGTGTTTTGCCGTGATATTGCGGTGGTTGGGAATCTGCTTTCGCAGGGGAGGTTCAAT AGGTCGATTCCGGTGAAGTATGAGGCATTGACTTGCTGATTCTTGGGATGATTTTGCCGGCGGGAAACAAGAAAAAAAGA ATGAAAGCTAGTACTGTACAAATGGATAATTTTTGAAAGTGCCGGGAAATTTTGTTGACCTTCAAAGTTATATTTTGCTT TCATGTTCATCATCTATTAGATGTACAGAAGAATATCAGTCTCTGCGTTTGGAATATGGATATGCATCGCTTAAACCTCT CTGTTTAAGAACCTTGTTTGCTCTTTGAAAATATTTTATCATAGTGATTACTGACTACATAAGATAATTTAAGCCTTTTA TATACTAGCATTTTATCAAAAGTTAACAAATGTGAACAATAATGTTTTCTTCAGGCTCAAAATAAAAATAGAGAGAAATG AATGTTATGATGGGTCGGGACTCATGAGTGATATTGTGATA
CDS sequence (LotjaGi5g1v0246100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTCACCACCCCCTATTTCAATCCTACAGAGAAAAAACACTGGTGGCTCACCAATCGTAAGCTTGTTGAGAAATA TATCAGAGAGGCACGCAGCCTCATCGCGACGCAGGAACATAGCGAGATCACTTCAGCTGTGAGCCTTCTAGACGCGGCTT TGGCGATCTCTCCGCGGCTAGACCAAGCGCTTGAGCTCAGAGCGAGGTCTCTGCTCTTCCTGCGGCGGTTCAAGGATGTC GCCGACATGCTTCAAGACTATATTCCCAGCCTCAAGATGGCGATGGCAGCGAGTGATGACTCAGGCTCTGTTTCTTCTGA AGTTTCTTCGTCTCAGCAGCTTTCTAGAGAAGGTGTGAAGCTTCTTTCTTCATCAACATCGGATTCCTCTGTTCAGGAAC AGAGTTTCAAGTGCTTCTCTGTTTCTGATTTGAAGAAAAGAGTCATGGCTGGGCTCTGTAAAAGTTTTGATAAAGAAGGG TATTGGAGATACTTGGTTTTGGGCAAAGCATGCTGCCACTTAGGCCTAATGGAGGATGCAATGGTTCTACTACAAACCGG AAAACGCCTAGCAAGTGCGGCGTTCCGCCGCGAGAGCGTGTGCTGGTCGGACGACAGCTTCTCACTCTGGACCACCACAC CGTTCTCCGGCGACTCCACCACCGCAGCCACCACCCCACCCCGCGCCCCTCTAACAGAGTCCGAATCCGTCACACAACTC CTAGCCCACATCAAGTTCCTCCTCCGCCGCCGCGCCGCCGCAATGGCCGCCCTCGACGCAGGCCTCCACTCGGAGGCCAT CCGACACTTCTCAAAAATCCTCGACGGCCGCCGCGGCGCTCCACAAGGCTTCCTCGCCGAGTGCTACCTTCACAGAGCCA CCGCATTCCGCTCTGCAGGCCGAATCGCCGACTCAATCGCCGATTGCAACCGAACCTTAGCACTGGACCCAGCCTGCATC CAAGCACTCGAAGCCAGAGCTTCCCTTCTCGAATCAATTCGCTGCTACCCAGATTGCTTGCACGACCTCGAGCATCTCAA GCTTCTCTACAACTCCATCTTACGTGACAGAAAACTCGCCGGCCCTATCTGGAAGCGGCACAACATCCGCTACGGCGAGA TTCCGGGGAAGCTCTGCACCCTCGCCGTGAAATCTCAACAACTAAAGCAGAGAGTCGCTGCTGGAGAAACCAGAAACGTT GACTACCACGCTCTGATCGGGTTACGACGCGGGTGTGGGAAATCAGAGTTGCAGAGAGCTCATCTGTTACTCTGTTTGAA GCACAAGCCGGACAAATCCACCGGGTTCATCGAACGGTGCGAGCTAGCCGATGAACGTGACCTTGAATCGGTTAGAGACA GGGCGAGGATGTCAGCGTTGTTGCTGTATAGATTGATTCAGAAGGGTTATAGCAGTGTGAATGGTGTGATTGTGGAGGAA GAGAATGCTGAGAAACAGAGGAAGATGAATGTGGTGCAAAAAACAGCAAATGCTGTGGTTCAAGTGCAACATAAGATTCA GATGAAAACAGATGAAGTGAAGATTGATGATTATAATGGTAATAAGCCTGATAAGTTGGTATATGAGTCAAGGAAATGTG CTGCTTCTTCACCTTCGATTGTGAATCCCTCTGCTTTTCAAGGTGTGTTTTGCCGTGATATTGCGGTGGTTGGGAATCTG CTTTCGCAGGGGAGGTTCAATAGGTCGATTCCGGTGAAGTATGAGGCATTGACTTGCTGA
Protein sequence (LotjaGi5g1v0246100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVTTPYFNPTEKKHWWLTNRKLVEKYIREARSLIATQEHSEITSAVSLLDAALAISPRLDQALELRARSLLFLRRFKDV ADMLQDYIPSLKMAMAASDDSGSVSSEVSSSQQLSREGVKLLSSSTSDSSVQEQSFKCFSVSDLKKRVMAGLCKSFDKEG YWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLWTTTPFSGDSTTAATTPPRAPLTESESVTQL LAHIKFLLRRRAAAMAALDAGLHSEAIRHFSKILDGRRGAPQGFLAECYLHRATAFRSAGRIADSIADCNRTLALDPACI QALEARASLLESIRCYPDCLHDLEHLKLLYNSILRDRKLAGPIWKRHNIRYGEIPGKLCTLAVKSQQLKQRVAAGETRNV DYHALIGLRRGCGKSELQRAHLLLCLKHKPDKSTGFIERCELADERDLESVRDRARMSALLLYRLIQKGYSSVNGVIVEE ENAEKQRKMNVVQKTANAVVQVQHKIQMKTDEVKIDDYNGNKPDKLVYESRKCAASSPSIVNPSAFQGVFCRDIAVVGNL LSQGRFNRSIPVKYEALTC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 579 | 579 | 1.4E-274 | – | |
| PANTHER | 1 | 579 | 579 | 1.4E-274 | – | |
| SMART | 161 | 194 | 34 | 390.0 | ||
| Gene3D | 218 | 360 | 143 | 3.2E-13 | ||
| SUPERFAMILY | 252 | 349 | 98 | 1.01E-10 | ||
| SMART | 286 | 319 | 34 | 0.0049 | ||
| CDD | 401 | 435 | 35 | 1.39388E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0246100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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