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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0246500 |
| Transcript ID | LotjaGi5g1v0246500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipase; TAIR: AT1G02660.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|P19515|LIP_RHIMI Lipase; TrEMBL-Plants: tr|I1JBH3|I1JBH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55500213..55504420) extracted from Lotus japonicus Gifu genome v1.2.
ATTTATATTATATATATATCATATATACTATAGTATAAAATAAAATAAGGGTCCGAAATTTGGGTCACCTGTTTCTATTC AGTTTTTGTTAGGTTCCGGTGTCCCTCCTATTTAATGCTTCTTCTTATTCTTTCTTCCTCTTCTTCTATTTTGCGTGTTT TAGTTTAAAAACCAAACCAAACCAAACCAGTTCCATAACGTTCAAACCCAAAACACCATCGTTGTCAACAAACATTGTTG TCTTCTCCGCAAAACTAACCATGGAAACCACCATGTGCTTCAACAATGGGATCGTTCCCTCGATCCCGATCGGCGGCTCT GTGGACGCACGCGCCAACCCTTCTCAGGTCAGCGCGATGGGGCGTTCAGCGGCGGAGAAACCGAAACCGCCGCAAAAGTC GTTGTTCTCGAGATTCTCGTTTAGGTATCCTTTAGAGTCTCTCTGGCCGCGGGGAGCTCGGGACGGCGGGTTTAGTGGGC TGGCCTTAGACGACGCTGTTTTGGTGGAGGACGGTGAAGAAGAGAAGGCTGAAAGAGATGATGAAAGGGAGGGTGGGAAC TGGGTTTTGAAGATTTTGCATGTGAAGTCGGTGTGGAAGAGGGAACAGGGGAACGGTGGTGATGAGGAGAATCAAGGAGA AGGTACAGCCAACGATCACAGGAATGAGGATGAGGAGGTGTGTTGTGATGGTTGCATGGTTGATCAAGATGATGACGAAA AAGAAGAAGAAGAAGAAGAAGAAGATGTTCAGTTTGATAGAGACTCGTTTTCCAGAATGTTACGGAGGGTGTCTTTGGCT GAAGCTAGATTGTATGCGCAGATGTCACACTTGGGGAGCTTGGCCTACTCTATTCCCAAAATCAAGGTATTGGATTGTGT TGAGTTTAAATCTTTCTTCAATTTTAGCTTCTATTTGTGCTTTTAGACTCAAATCGGTTTTGCTAAATTGACATTCATAG GTTTCTGAGACTTTAGATCTACCTTGTTGTAGACTGATCTGGGTGATTTGTTCTGAACATACATTGATTGCTTGCAGATT TATTGTGTCATAATTTGTTTGGTTTTTCTAGTTTATGAAGGGGATGATTTGGAATGCTTAAGTTTGTATCTTAAACATGT TATAAGCACCTGCACTTTCTGGGTTTAGGTTGTGTTGTTTATTTTGATAAACCCTTGGAAGGTTTTAGTTTGAACTTGAT GAGGCAATGATCCTGTATGTTTGAATTTCTGTTGAACTCACACCGAGCTATGTTTGAGTCAACGTGTCAAAATCTTGCTT ATCTCATGATACATTGAGATGTGTGTTTTCCCATGGAAACGGGAAACCAAATGGGCACTTGCCTTACTTATCTAACTAAG ACAAAATGGAATACTTTTTTATTAGCTAGCTTAATTTGTAATAATTTTGGAATGCTCACCAGTTATGTGATCTATTTTTT ATTGCTTGCATGTGATTCGATTGCATTTTTGCATTTCTAATATGTATTTGTAAAGCTCTGTTTTCTATTTTTGGTTATAT GATATTTCTGAAATGCATTGGCAAATCCTGGAAAATAATTTTCCACAAACGCATTGGAAGTACTGATTTATCTTTTGTCT TTGGCAATGTAGCCGGGGAAACTCTTAAAACATTATGGTCTGCGTCTTGTAACTTCATCAATAGAGAAGAAGGAATTGGC TGCAGCAGCTGAAAAAACTCCTCAGGAAGGTGAAACTAATGAGAAGGCAGAAGATGAGAATGAAACAAAGGAGGCGAAGA ACGGTGGATCCAAGATAAGTGCATCTGCTGCTTACAACATTGCTGCCTCTGCTGCATCTTATCTTCATGCTCAGACTAGG AGCATACTCCCATTCAAATCTTCAACTGCTGCGGATGGTAAAGGTTCCCCTGAAGGAAGCAATGAAAGCCTTAGTGGTGT TAACATGTTAAACACAGAGTTCGGATCTTTGATGGCAACTACTGATTCAGTGACAGCAGTGGTTGCAGCAAAGGAGGAAG TAAAGCAGGCGGTTGCAGATGATCTAAACTCAATTCGTTCATCACCCTGCGAATGGTACATATGTGATGATGACCAGAAT GGTACAAGGTTCTTTGTTATTCAGGTAGGTAAGCGTTAATGGGGACATGTTTTTGCTTTTTTCAGTATAAATTGAACTTC TTGGTTGCGTTCAGTTTTGCTGTAATTCGTGACCCGTCAAATATGATTGAAACATTATCATTGTTGTTTCTCAATATCTA GTTGTGATATTTTTGGGGTGTATGTAATTCACGGTCATTTTTTATGTATATGTTCTGCTCTTTCTTACTATTTATTTAAT TTAATATAAATATGCAGGGTTCTGAGTCAATGGCATCCTGGCAAGCAAACCTTCTTTTTGAGCCGGTTAAATTTGAGGTA ATTTTCAGACTGAGGTAGTTTCTTAATATGTAATTTTTCTTGTCAAAGAGGGAACTTTCGTTCTTTTAACAGTTACGAAT AAATGTATTTGATTTGAATCATTGTTAATGTTTATCCAACTATATCATGAAAATGAGACACTGATGTACATATCTTTTGT TTAGGGGTTGGATGTCCTTGTGCACAGAGGTATTTACGAGGCTGCTAAAGGGATATACCAACAGATGTTGCCAGAAGTTC ATTCTCATCTAAGAGCAAAAGGTTCTCGTGCAACTTTCCGTTTCACAGGGCATTCTCTTGGTGGAAGCTTGGCGTTACTT GTAAATCTCATGCTCTTAATACGACAAGAAGTGTCAATCTCCTCTCTACTTCCGGTGATAACTTTTGGTTCCCCATCCAT CATGTGTGGAGGTGATAGTCTCCTCGGCAAGCTAGGTCTACCACGGAGTCACCTTCAGGCAATTATGATGCACAGAGACA TAGTACCACGAGCATTTTCCTGCAAATATCCTGACCACGTCGCAAGACTGTTAAAGGCTGTCAATGGGAACTTCCGTGAC CATCCTTGTCTCAATAACCAAGTAAGTTCCTGCTTATCCGAAAGTTCTGTAAACAAATAAATTTCTTTAATAAGCCTCTG GGGTCCGATCATACTAGAACTAATGCACCGGTTTTACTTATTTGTGATTTTTTTTACTGCAGAAGTTACTATATGCACCA ATGGGTGAACTGCTGATTCTACAGCCTGATAAGAAGTTTTCACCAAGCCATGACCTCCTGCCATCAGGCAGTGGTCTATA TATCTTGTGTTGTCCTTTGTCAGAATCCAATGATGCAGAGAAGCTGCTCCGAGCCGCGCAGTTGGAGTTCTTGAACTCGC CTCATCCACTTGAGATATTAAGTGACCGATCTGCTTATGGATCTGAAGGATGCATACAAAGAGATCATGACATGAATTCC TACTTAATCTCCGTGAGAACCGTGATTCGCCAGGAACTTAACCAGATCCGTAAAGCAATGAGAGAACAGCGGCGGAAGGT GTGGTGGCCTCTGGTGTTGCCACGCGGAATCGATGCCAACATTGTTGTTGGTAGATCCATGGTGTCAGTCAATGTGGGTG GTCAACGCCAGTCCTCATTCTCTGGCATGATACAGATAGGAAGAGAGTCCTTGAAAAGGTTCAGCAGACTTGTTGCATCT CAACATATGCATTTGTTTGTGCTACTATTATTCCCTGCAAGGTTGTTACTTTTGGGGGCATATAACGTGATTAGCTTCAA ATGAATCATTATTGAAGAGGGAAAGAAAGGGAAGGGACAGTTGTATATAGGGTGTGACCACATGGTTTGTAGTAGGACAT TAGATGATTCTTTATTCTTTTATTTCCAAAGTAAAATGTAGTATCTCTCATGAATGGTGCTTGTAGAAGGATGTTGCTCA AATATTAACACATAAATTTAATTAGTTGAGGTTATTGTTATTGCCTTCAAGTAATGCTTATGTTGTTGCCTTCAATCCCT GAGAAATCAAGTGTATCATTTTAAAATAAAATAAAATTGGTCCAATACTTTAATACAAAGGCCAAGGAGTTTAGTCCTGG GTTGAACTACCAGAAATTTGGTGAGACTTTATGAATACTTCTCTGTCTGTCCAGGGTGTCACAAAAGATGGAAAAGGAGA AATGATGTTTGCTTGCCATTTGTGAGCTAGTTATTGAACTCGTTGTTTGGTGGACACAATTGATGGGTGAAAAATAGGTT GGTTTTTAAGGTTTGGGAATGAGATGCTTCTCAAACTTATAAGTTGGG
CDS sequence (LotjaGi5g1v0246500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCACCATGTGCTTCAACAATGGGATCGTTCCCTCGATCCCGATCGGCGGCTCTGTGGACGCACGCGCCAACCC TTCTCAGGTCAGCGCGATGGGGCGTTCAGCGGCGGAGAAACCGAAACCGCCGCAAAAGTCGTTGTTCTCGAGATTCTCGT TTAGGTATCCTTTAGAGTCTCTCTGGCCGCGGGGAGCTCGGGACGGCGGGTTTAGTGGGCTGGCCTTAGACGACGCTGTT TTGGTGGAGGACGGTGAAGAAGAGAAGGCTGAAAGAGATGATGAAAGGGAGGGTGGGAACTGGGTTTTGAAGATTTTGCA TGTGAAGTCGGTGTGGAAGAGGGAACAGGGGAACGGTGGTGATGAGGAGAATCAAGGAGAAGGTACAGCCAACGATCACA GGAATGAGGATGAGGAGGTGTGTTGTGATGGTTGCATGGTTGATCAAGATGATGACGAAAAAGAAGAAGAAGAAGAAGAA GAAGATGTTCAGTTTGATAGAGACTCGTTTTCCAGAATGTTACGGAGGGTGTCTTTGGCTGAAGCTAGATTGTATGCGCA GATGTCACACTTGGGGAGCTTGGCCTACTCTATTCCCAAAATCAAGCCGGGGAAACTCTTAAAACATTATGGTCTGCGTC TTGTAACTTCATCAATAGAGAAGAAGGAATTGGCTGCAGCAGCTGAAAAAACTCCTCAGGAAGGTGAAACTAATGAGAAG GCAGAAGATGAGAATGAAACAAAGGAGGCGAAGAACGGTGGATCCAAGATAAGTGCATCTGCTGCTTACAACATTGCTGC CTCTGCTGCATCTTATCTTCATGCTCAGACTAGGAGCATACTCCCATTCAAATCTTCAACTGCTGCGGATGGTAAAGGTT CCCCTGAAGGAAGCAATGAAAGCCTTAGTGGTGTTAACATGTTAAACACAGAGTTCGGATCTTTGATGGCAACTACTGAT TCAGTGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCGGTTGCAGATGATCTAAACTCAATTCGTTCATCACC CTGCGAATGGTACATATGTGATGATGACCAGAATGGTACAAGGTTCTTTGTTATTCAGGGTTCTGAGTCAATGGCATCCT GGCAAGCAAACCTTCTTTTTGAGCCGGTTAAATTTGAGGGGTTGGATGTCCTTGTGCACAGAGGTATTTACGAGGCTGCT AAAGGGATATACCAACAGATGTTGCCAGAAGTTCATTCTCATCTAAGAGCAAAAGGTTCTCGTGCAACTTTCCGTTTCAC AGGGCATTCTCTTGGTGGAAGCTTGGCGTTACTTGTAAATCTCATGCTCTTAATACGACAAGAAGTGTCAATCTCCTCTC TACTTCCGGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTCCTCGGCAAGCTAGGTCTACCACGG AGTCACCTTCAGGCAATTATGATGCACAGAGACATAGTACCACGAGCATTTTCCTGCAAATATCCTGACCACGTCGCAAG ACTGTTAAAGGCTGTCAATGGGAACTTCCGTGACCATCCTTGTCTCAATAACCAAAAGTTACTATATGCACCAATGGGTG AACTGCTGATTCTACAGCCTGATAAGAAGTTTTCACCAAGCCATGACCTCCTGCCATCAGGCAGTGGTCTATATATCTTG TGTTGTCCTTTGTCAGAATCCAATGATGCAGAGAAGCTGCTCCGAGCCGCGCAGTTGGAGTTCTTGAACTCGCCTCATCC ACTTGAGATATTAAGTGACCGATCTGCTTATGGATCTGAAGGATGCATACAAAGAGATCATGACATGAATTCCTACTTAA TCTCCGTGAGAACCGTGATTCGCCAGGAACTTAACCAGATCCGTAAAGCAATGAGAGAACAGCGGCGGAAGGTGTGGTGG CCTCTGGTGTTGCCACGCGGAATCGATGCCAACATTGTTGTTGGTAGATCCATGGTGTCAGTCAATGTGGGTGGTCAACG CCAGTCCTCATTCTCTGGCATGATACAGATAGGAAGAGAGTCCTTGAAAAGGTTCAGCAGACTTGTTGCATCTCAACATA TGCATTTGTTTGTGCTACTATTATTCCCTGCAAGGTTGTTACTTTTGGGGGCATATAACGTGATTAGCTTCAAATGA
Protein sequence (LotjaGi5g1v0246500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METTMCFNNGIVPSIPIGGSVDARANPSQVSAMGRSAAEKPKPPQKSLFSRFSFRYPLESLWPRGARDGGFSGLALDDAV LVEDGEEEKAERDDEREGGNWVLKILHVKSVWKREQGNGGDEENQGEGTANDHRNEDEEVCCDGCMVDQDDDEKEEEEEE EDVQFDRDSFSRMLRRVSLAEARLYAQMSHLGSLAYSIPKIKPGKLLKHYGLRLVTSSIEKKELAAAAEKTPQEGETNEK AEDENETKEAKNGGSKISASAAYNIAASAASYLHAQTRSILPFKSSTAADGKGSPEGSNESLSGVNMLNTEFGSLMATTD SVTAVVAAKEEVKQAVADDLNSIRSSPCEWYICDDDQNGTRFFVIQGSESMASWQANLLFEPVKFEGLDVLVHRGIYEAA KGIYQQMLPEVHSHLRAKGSRATFRFTGHSLGGSLALLVNLMLLIRQEVSISSLLPVITFGSPSIMCGGDSLLGKLGLPR SHLQAIMMHRDIVPRAFSCKYPDHVARLLKAVNGNFRDHPCLNNQKLLYAPMGELLILQPDKKFSPSHDLLPSGSGLYIL CCPLSESNDAEKLLRAAQLEFLNSPHPLEILSDRSAYGSEGCIQRDHDMNSYLISVRTVIRQELNQIRKAMREQRRKVWW PLVLPRGIDANIVVGRSMVSVNVGGQRQSSFSGMIQIGRESLKRFSRLVASQHMHLFVLLLFPARLLLLGAYNVISFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 425 | 425 | - | – | |
| PANTHER | 15 | 715 | 701 | 0.0 | – | |
| PANTHER | 15 | 715 | 701 | 0.0 | ||
| MobiDBLite | 26 | 46 | 21 | - | – | |
| MobiDBLite | 114 | 137 | 24 | - | – | |
| MobiDBLite | 225 | 254 | 30 | - | – | |
| MobiDBLite | 225 | 251 | 27 | - | – | |
| MobiDBLite | 285 | 304 | 20 | - | – | |
| Gene3D | 308 | 527 | 220 | 1.8E-25 | ||
| CDD | 340 | 495 | 156 | 1.42536E-24 | – | |
| SUPERFAMILY | 346 | 538 | 193 | 2.16E-25 | ||
| Pfam | 363 | 499 | 137 | 8.9E-26 | ||
| Phobius | 426 | 445 | 20 | - | – | |
| Phobius | 446 | 693 | 248 | - | – | |
| Coils | 617 | 637 | 21 | - | – | |
| Phobius | 694 | 715 | 22 | - | – | |
| TMHMM | 695 | 717 | 23 | - | – | |
| Phobius | 716 | 718 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of LotjaGi5g1v0246500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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