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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0247300 |
| Transcript ID | LotjaGi5g1v0247300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparan-alpha-glucosaminide N-acetyltransferase; TAIR: AT5G47900.1 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624); Swiss-Prot: sp|Q68CP4|HGNAT_HUMAN Heparan-alpha-glucosaminide N-acetyltransferase; TrEMBL-Plants: tr|A0A0B2R830|A0A0B2R830_GLYSO Heparan-alpha-glucosaminide N-acetyltransferase; Found in the gene: LotjaGi5g1v0247300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55564019..55567984) extracted from Lotus japonicus Gifu genome v1.2.
GTTTATTGGTTAGGAGGATGCAACATTTCTCCTTTGGATTTTTGTACGGTGCTGGTGGCTTTCTTATATATAAATCAGGG TTGTTAATGGTGAATAGTGTAGCGTAGCAGCAAGCCCAAAAAACGTTATTTCGAGCGCTATTGCGGCAAATAGCGGTGAA CCCCCAGGGCGCTACGCTATTGCGTGCTGTTAATGAGCCTGAATTATAAATACAAATAATAAAAGAGCTAAAATTTTGAA CATTGTTCTAATTCTTGGGTAGCCTTTCAGAAAGTCTCTAGCAAACCAAATGCCACAAAGAAAGTCATATCAAGGACAAT TAAGCTTTTCCTTTTGGGGCTGTTGCTACAAGGTATGTTCTTCTTCTGCTTTGCTTCCATTTCATTACCTTAGCAAGCAG TTGAAACTTGTCAGGAAAAGTTATGTATTCTTTTGCACTTCTTCTTATCCATATTCCATAGAAATTCAATCCATGTTTTG TATCCGTTTACTTGCAGTATGCTTTGTGTGCTGGCTTGATAGCAATTGCTTTAATGTTTCTTTATGAAACTTATCCATAG GTGGCTATTTCCATGGGCGCGGCCATTTAACTTATGGAGTTGATTTAAGCAAGATACGCTGGCTTGGTGTACTTCAGGTA TCTGTAACCATAGAGTAGTTGTCATTACTGTCTAACTTAGTAAGGTTTTTTTTGGGAGTGTTTCTAATTATGGCGATATA GCGTTGTTTAGTCTATGTAACCAACCCCCTAGCAGAAAACGACAGGTTGGTTTTGGTTATTTCTAATTCAGTATACATTC GATATTATTGCCGTACATGTTATTTTGTTGGTGATTTACTTTTTGCCACTGGTAAATTAACAGTTTCATATTGAATGATG CTTTCTGAAATTACTTATTTGAAATAGCTAATGAGAAAATGCACCAAGTATCTTTATAATACTGCTTCTTTGACATGTTA ATTTTGATGCCCGTTTTATTGTATTGAGGAAGTAAATTAAAAAAATTCTCTCTATTAAGTTTTTTTTGTTTTGTTTTTTG AAACAACTCTATGAAGTTAGTATAACTTAAGGATGGTAGATGGTTGCAGGTTTACAGTTGGTAGAAGAGTCATTTAGTCA TTGTTTGGTTGCTCTGTTATGGGTAGGGCATAGGAATTACAACTGAGAAAATGGCCACAATTTTGAAAATAATCAATTTT GTTTTGCGTTATTTTGATAAATTTGTTTTCAATTAGATACATATTTTCCTTGTAATATGCAGAGGATAGCTATTGGGTAT TTCTTTGCGTCTACATCAGAGATTTGGCTAGTGAACAATAATATTTTGGTTGACTCACCAGCAGCTTATGCGAGGAAATA CTCCATTCAGTGGTTAGTTTACTTTTCTGGTGATTAAAGATTACAAGGGGCTTCCTCCATCTCGGTGTCAGGATTCAACT TCTGTGAATACCACTTTTGCTTGCCTTGTGATATTCCTTCGTGCTAATTGCTTGTTTCTTTGTCCAGGATGTTTTCTATC TTACTTTGCTCAGTGTACCTTTGCTTGCTCTATGCCCTCTATATTCCAGATTGGAAGTTCGAACATTCTAACTTTCTTCG AAATGTGAGTTGACATGGTTTGTCATTCTGTGCTACTGGATGCTAAAACACATATTATGAATTTTTTTGGCTGATTTTAA CTTATGCTTGCTTGTGCACCCAAGTTCTAAGATGGTATTAGACCCATCTAAGATTTGTATTGTATTGAGTCACCCATAGA TGGGCCACTTGCAAAATTCACATTGCAGTATAAAGAGTAGGGTAATCCTCATCCCTAAGCTAGCTTTTCAGGTAGAGTTA GGCCTAGGCTCGAGTCCTAAGGTCTGGGTTAACTCTGATTATTATATTTAATTTTGTATTTCTATTTTCATTTCCATGGC TCTCCCCTCCTAGTGGTATGAAAAGCCTTTAGTTGTTTTGCATTTTCTTTTCTTATGGAGAATAAATCGACATGCAATAT TTTTCTCCAGGTTCATTGTGGAGTGAGGGGCAGTCTTGAACCTCCTTGTAATGCTGTGGGATTTATTGATAGATTAATTC TTGGTGAAAATCATATATACCAGCGTCCTGTGTATAGAAGAACAAAGGTTATTTACCCTCTGACGTATTTTCTGTCTTGA ATCTACTGCCTCCTTAAACTTCTTTTGTTTTATCCATTAAATAATCTCATTCTTGAGTCTTGACCTCCTTTTCATTTTCA GGAGTGCAGTGTTAATTCACCTGATTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGTCTTGCACCATTTGACCCAG AGGGTATATTGAGGTTAAACATAGTTCCTGCTCTCCTTTTATCTTTTCTTTTGTAATTATTATAGTGGCATGAAAAGCTA TGGTACATGTTATAATGTGATGTGTACTTGGTTTATGGCATGTTCATTTCTTTTCACTGCACTATAGACAACCTGATTCA TGATAAATTATTCAATTAACTATCTTCATTTGATTAACACTGAAATTTTAGTGATTTTGGGAAAGTTGGACTGTCATCTT TGGCTTGGTTGGGTCATCTAGAATTTTCTTTGGGCCGGTTTATATCCATACTGGGCCCAGACTAGCCCAGATTTAGCTTC AGTCAGCCATCCCATACTTTTTATTGATTATTGAGCTAGTCCATCAAGTTTAACTGATTTTGACGGTATTTAAATTTTAT TAATGCACTTTGATTGGTTGCTAACTTACTTTATTAAATCTTCTAGTTCACTGATGGCTGCCATTACATGTTTCATGGGA CTGCAATTTGGGCACATACTTGTAATTTTTCAGGTTCGGATATGATGCTTTTACAATGTATAAGAATCCAAGATTAATGC CTTTCTCATGATATAAAGGTAGAAGATGTAAAGTTTGTCTTGTGTGTGTGTTAACTATTGTCTTCTCCATTCAGGGTCAC AAGCAGAGGATACTTCTTTGGTCTGTGTTTTCCTTCTTTCTATTGCTGATTGGATATGTTCTGGAGATTTTAGGTACTAT CTAATTTTAAATTTGTTGAGGTACATTCTATTCTTCAACTAACAACTGTAAAGTTTTTCAGGAATTCCTTTATCAAAAGC TCTGTACACATTAAGCTACATGTGCGTCACTGCAGGAGCATCAGGCTTGGTCTTGACTGCTATCTATTACATTGTAAGTT CATCTGCGTGTCATAAATAGAGGTAATTTATATGCCAAGGAGAAAAAGAGATAATTAGCAGATAGGCATGAGAGTGGTTA CTCAAGTGGTTGATTACCTGGTCCTCAAGGAAGGATATACATAAGCTCCTTGTGTGATTCTCATGAGAGTGGAAAGCCAT AATTTGGGATCACCATAGCCAGCCATCAATTGTTGAGAGGAAAGTATTGCTTTGTTGTCTCACTGAACACCTCTCCATCA CAGCCAAAAAACAAATAGTGACATTTTAATCTCAATATATAAGCTAACCAAGAAAAATAATTTTCTTTCTCTTCTGATTT TATTTAAATGATGCATATCCCATATTTTTGTAGATGAAAGATTAAAAGCCTAACAACATCACTAGAACTTATTTTCTTGC AGGTTGACATAGGACATTTTAGAAAGCCTACAGCTTTACTACAATGGATGGGAATGAATGCTCTTATTGTATACGCATTG GCTGCTTGTGATATATTCCCGTTAGTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAACTTGGTAATGTTCATTTC CAACGGTTTTGTTTGTCTCCTCTTTCATTATACTTGATTGTTAAAATTGGTAATTTAATTTGCAGGTTGATGCCAGTGAA ACTTTACTACAGAACGTATTTCATTCTGAAAAGTGGGGTACACTGGCCTTTGTAATAGTTGGGATTTTATTCTGGTGTCT TTTTGCTGGTTTCCTTCACAAGAAAGGGATATATATAAAAATGTAA
CDS sequence (LotjaGi5g1v0247300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTCTATCTTACTTTGCTCAGTGTACCTTTGCTTGCTCTATGCCCTCTATATTCCAGATTGGAAGTTCGAACATTC TAACTTTCTTCGAAATAATAAATCGACATGCAATATTTTTCTCCAGGTTCATTGTGGAGTGAGGGGCAGTCTTGAACCTC CTTGTAATGCTGTGGGATTTATTGATAGATTAATTCTTGGTGAAAATCATATATACCAGCGTCCTGTGTATAGAAGAACA AAGGAGTGCAGTGTTAATTCACCTGATTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGTCTTGCACCATTTGACCC AGAGGGTATATTGAGTTCACTGATGGCTGCCATTACATGTTTCATGGGACTGCAATTTGGGCACATACTTGTAATTTTTC AGGGTCACAAGCAGAGGATACTTCTTTGGTCTGTGTTTTCCTTCTTTCTATTGCTGATTGGATATGTTCTGGAGATTTTA GGAATTCCTTTATCAAAAGCTCTGTACACATTAAGCTACATGTGCGTCACTGCAGGAGCATCAGGCTTGGTCTTGACTGC TATCTATTACATTGTTGACATAGGACATTTTAGAAAGCCTACAGCTTTACTACAATGGATGGGAATGAATGCTCTTATTG TATACGCATTGGCTGCTTGTGATATATTCCCGTTAGTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAACTTGGTT GATGCCAGTGAAACTTTACTACAGAACGTATTTCATTCTGAAAAGTGGGGTACACTGGCCTTTGTAATAGTTGGGATTTT ATTCTGGTGTCTTTTTGCTGGTTTCCTTCACAAGAAAGGGATATATATAAAAATGTAA
Protein sequence (LotjaGi5g1v0247300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSILLCSVYLCLLYALYIPDWKFEHSNFLRNNKSTCNIFLQVHCGVRGSLEPPCNAVGFIDRLILGENHIYQRPVYRRT KECSVNSPDYGPLPPDSPGWCLAPFDPEGILSSLMAAITCFMGLQFGHILVIFQGHKQRILLWSVFSFFLLLIGYVLEIL GIPLSKALYTLSYMCVTAGASGLVLTAIYYIVDIGHFRKPTALLQWMGMNALIVYALAACDIFPLVIQGFYWHSPENNLV DASETLLQNVFHSEKWGTLAFVIVGILFWCLFAGFLHKKGIYIKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 285 | 285 | 1.0E-156 | – | |
| SignalP_EUK | 1 | 16 | 16 | - | – | |
| PANTHER | 1 | 285 | 285 | 1.0E-156 | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 2 | 12 | 11 | - | – | |
| TMHMM | 2 | 19 | 18 | - | – | |
| Phobius | 13 | 16 | 4 | - | – | |
| Phobius | 17 | 109 | 93 | - | – | |
| Phobius | 110 | 133 | 24 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| Phobius | 134 | 139 | 6 | - | – | |
| Phobius | 140 | 162 | 23 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| Phobius | 163 | 167 | 5 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 168 | 192 | 25 | - | – | |
| Phobius | 193 | 211 | 19 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 212 | 232 | 21 | - | – | |
| Phobius | 233 | 255 | 23 | - | – | |
| Phobius | 256 | 276 | 21 | - | – | |
| TMHMM | 257 | 276 | 20 | - | – | |
| Phobius | 277 | 285 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0247300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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