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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0250400 |
| Transcript ID | LotjaGi5g1v0250400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial import inner membrane translocase subunit tim22; TAIR: AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; Swiss-Prot: sp|Q9LZH8|OP164_ARATH Outer envelope pore protein 16-4, chloroplastic; TrEMBL-Plants: tr|I3T2W3|I3T2W3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0250400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55887549..55893753) extracted from Lotus japonicus Gifu genome v1.2.
TGATAATTGAAGAAGATAATTTAACAATGATAATGATATTCTATAAGTTAAACTTACCTTGTACATCTCTTCCCATACTT CTTCAGGAGAATTCACTTTGTTAGCCTCAGGATCCCATGTAACTCCTGTGCGAGATATCAAAGTTGAAAATTCACGATGT TGAAGGCGTAGCCGATTAAACTTTCCCTTCAGCCTTTCTACACCATCAGGTAGGGGTGCTCCACTTGTCTTTTGCAACTC AATGTTTATTTCTTCCCATATTGTTTTCTTAAATGTAGACCCTTGCAGCTGCCCTTTTTTCACTCGATCATAAATAATAT CAATGAATATCTTTGTGTTTTGGGTTGTCCATTCCATGCTCTCCCCCTTCTCAGTTTTTCCTCCCATCTTATGCAAATAA TCTCATATTAAGCAAGTAAACTAATAAAGGGCACAAGAGACTCTTACAAGGCAAGTAAAAAAAACAGACCCTGCAGAGCA CAATTAAAAGAAGCACAAGAGACAATATATATGGATGCCATAACATTCAGATTATTGGTACAACAACTGGAAAAAGTTAA TAACCAAATGCAGCCACTAGCTTCAATCCCCAACAAAACAAAAGAAAAGGTAATACATCACACCCCTACTAGTCCCAAAA CCAAAAGCCCCACCAAATTTACCATGGTGGAGGCATTCCCAAAAACTGAAAAAGAACCAGCACCTATTATTGGAAAGCCA ACTACAAGCAACCAAGATGCAAGCATTCCTACATCAAAGTTGTTCCTACTACAAGTAAACCTTTTTTTTTTTGGTAAGCC AAAGTTTAATTAATGGAAATACTATGAGTATTTTAAGCCATGTACAAAGCAAAAACAAGAAAGAAGGAAGAATACTAAAG CTACTTCTATCTAGTACTGGTACTGTACAAAGGAAACATAACACCATACCAAAAACAATTCAAATCCCCTACTAATTTAA AAATAGCAGCCACGGGCCCTTACAGAAACAGGAAAAATATGCAACCAGCCAAGTCTCCACATAAAGCCACTAGGTTCTAT GGCAAACCCAAGGTTTCAATTGCCTCAGCATCACGTGTTTTTGCATAGCACATATGACATGTATTACTATGAAAAAATAT ATGTCCAGTTGGTTAATCTGTGGATTCTGTGTTGTATGTTAATTGTTGAAGACACCCTAATATCAGCAGTCAAAGTGGAG CAATTTGCCTGGACATCTTAAAAGACCAGTGGAGCCCAGCATAAAAAGCAAACCAGCCAAGGAATAGAGTTCAGAATCAA CCAAAAAACATGGGTTTTACAGATTTTGAAGGCAGTATAGAGGGTTTAAACATGGATTGAAACACCAAACCGAAAAAACT AGCTCCAAAATCAACCAAAACCCATCAAGTGAAGCACCCAAAATAGAGTAACCAAGAAATAAGGTTCATATCAGATGGCA CCCAAAAAAGACATAAAATAGGGTTCACAGTGCAACATGGTGAGAACCCAGTTTCACGTTTCAAAAATTCAAAAAAGAGA AGACAAAAGAGAAGGAGAAGAACTTTGGTTGTGGGATGAAGGAGGTAGCAGAGAAGAACTTGCAGAGGTTAGGGCCGGCA CACACTTTCTTCCTTCAGAACGAAAAGAAAAGAAAGAAACCAATTTCATTATAATTACAACCCTGCCACCGCGTGTTTTC ATCATTTCGTTTCCGTTTTCATTGAAAATGTGAAAACGACTTTTTTTTATTTTCAAAAGTTGACCCATTTTCGGAAATAT TTTCTCTGAAAATATTTTCAAATTTTTAATCAAACACGTTTTCACAACTATTTTCTGTTTTCTTTGAAAATGAAAACAGA AAATGGCCAAACCAAACAGGCCCTTATATTTTCTCATTAAAAAAATCCATCAAGTCTTAATTTGTTCCTAGAATTAAATT TCCCCTTTGCTAAGGTCACTAACGGATTTAAGATTCCAACTTGTGGGGGGAAAAATCATGAAGAAACATCTAAGATGCGA ACTTATAGTAATTATCATCCACATCAAATGCAATTTCTTGCAACATTAGACGAGAAAAAACTCAAACATATCTCCTGCTG TAATTAGTAAATAGTGACCAAATAAAAGATAGCAATCCCAACATGTAAGATGCGAACTGTGTATCTGAATTCTATGGCAT AACATTGGTTCACAATGAAAATTTAAACAACCAGAAAAAAGTCGATACATAACATAGATTAAAAGCAATTTCCGCAACAA TTACACCTAATGGATAATGCCTCAAGACAGAGTCTTAGATCTTCAGTCTTCCTCCTCACCCTCATTCTCAGCAATGTTGA AGTATCTCAACTCGTAGACATTCCGGTCCTTGTTGGAGGCAATCACACGTAGCCAATCTCTCACATTGTGCTTTTTCAAG TACTTCTTGGTTAAGTACTTCAGATACCTGAGAAAGGTTCAATGGGAAAAAAAATCAAACAAAGTAGATAGAAATACCAG AGAAGAGACAACTAGTACTATAGGAAAACTCAGCTACAAAGAAACAAATGTGAAGTAACAAATAAATGACAAAACCAGCT AAAGATAAGCTGGGAAACCAGTCCAATTCATAACTGCTCCGACTCACAGCATTGTCTAAGTGCGCATTAGAAGAAGACTC ACAAGAGTCATGATCACTTAATTGTTAACAATTAAGCTCCAAAACTTTGGCAATGAAATTTAAATTTATTACCACATGCA ATCCATCACAGCAGAGCAAAACTTATTGCTACAAAATAGGAATTTTTTAGAAAAAGCAGAAAGCAAGAGAGAAACCTCAG CTACAGCAAAATCAAGGAAGAACTCACTGGTATCTTAAGAAAGAAGGGGCACCTTATGTCAACAAACAACCATCTCTTCC AAAATGGCTCAAACTAACCCAATGTTCATACAGAAACCTCTCTCAATTTCAATGCATGAAAACATCTCAAGCCAACACCA GCTCTAACTAGCATTTACTACTACCATCTCAGAAGAATTGAAGCTTAGTGAACAGTTGAGAAGATAACTAGCTAGCACCT AAACCTAGTTATATTCATTCCTCCCCTCTCAAACAAACTTGACAAGTTAGTAAGAAGTCTAGGAACTCAAAACATAAACT TGATAACATAAATCACATTCTAAATCGTGTATGACACAGTAATTCAAGTGTGTTCCACCATGATCAAAGCATCAAATCTT TTACACTTTCCTCATTCCATTGATACCAAATTACTTAAGAAAGTCCTAATCCCAATTAGTCACAGCTTTAAAAGATGGTA TAAGCATAAGCTATCCTGAGTAACTTATGAGAATAAGCTCAAAACTGCATAAGCTCTAAGTTCAAATAAGCTCTTCCAAA CAGGGCCTTAATCGACTATCTTCTAACAGAGTACATAATCTACTACACTAATCAGAAGCTCAAATATCTCAACTAACAGA ACAACATTTCAAATCAATACAACAACGAAAATCACCTCACCGTTTGGAGAAGTTGCTATCGGAGGTGACGGTGATTTTGC TCTTCTCACGAGAAACAGTGACAGAATCGCCGAGCGCACCAGCTTTGCCGCCGACCTTAATCCTCTCCTGCAGAAACTTC TCAAGGGAAGCGATGTCCATGATCTTATCCTCCACCGGCTTCGCGCAATCGATCACGAAGCTCGTCGCCTTCTTCTTCCC CTTCGCTCCACTCATCTTCGCACCTCTCTCTCTCTCACTCTGCAACTCTTCCTCCTACACCTTCTTTCTGATAACAAAAA ACTAGGGTTTTGCTTGCAACTTCATAAAGCAAAGGGTTTGAAGAAAATGGGCTTTTCTCATTTTGGACTGGGCTTAGGCC CAATTATGTCAAATGACTCTCGCTACCCTCTGATACAGGGAGAAAGATGGAAGAAGACCTCAACAACGTGGTTCCATGCT CCTCCCTCGCCGTCGAGTCTAGCCTCCGCGTCGGAACGGTGAGTCACCGTTCATTCTCATTCTCCTCTGCTTCTTCATTC ACCGTTGATTCTCATTCTCCTCTACTTCGTCTTCTTCTTGTTCAGGCTGGTGCAATCTGGGGCTTGTGTTATGGTCCCTA TGAAGCTCGTCAACAGGGTAAAATTCTCTTATGCATCCAAACTTGTAGTGATTTCTATTCTCAGTTGTGGATTTTCATCT CTTCAAGTTCTGTATGCAGGTCTTACTGGCATTCCACGAGTTTCTTTTGTGGTACATGATTTTCCTTTTTTTCAATTTGG TAGTGTATTGAATTCAAAACTGGTGCTAGGGTTTTCTGTGAGCTGATGGTTTAGTTTGGGTTGTTGAGAATAGGCGAACA CGGTCGGCAAGTTTGGGATTCGATGCGGTAATTGAACTATTGAACTCTGAATAACATGATGTGATGATGTTTGAGCTTTG TAATGATGTTTTTCTTTGTAGAATTGATGTTAATTGATTTGGGATTTTAGGACTTGTAGCTGGAGTTTTCAGCATTACGA GATGTAGGATTCAGCAATACAGGAGGCAAGATGATTGGGTTAGTTAATCAATTCCTTCTCTTTAATCCTTTGTTTTCAAC TAATCAAGAACTTCAGTGATAGGCGTCAGAAAATTGAGGAATTCATTTTTAATGTTAGTCTGTTAGTGAGGTTTATTTGT TAGTTAGTTTACTTTGTTGTAGATGAATTGTTAGTTAGTGCTGCAGTTATTGGATGTTCCTACTTGTTTACAGTTCAGTT TAATTTCAGAATTCAATGGAGTAGATTTGTGTTGTGATGTTCTTGTATTGTGTGCGTTGCAAGAGCAACTTAGTCGTTCT TTTACATATTTGAGATCTTCAGTGAAGCTTAGACTTTGTTCTTTATAGATAGTTCAGGAAAATGGAATTTGTACTTCTGG TAAGACCAATTGAATAAAGATTCTATGGGATCTGTTAGAAATATAATTATTCATGTGTCCTTTACCCAACAAATGAATAA CTATTAAGACCTATATTGAAATTGGAACTAACTAGTTAGACATCCATTGCCTGCTCAGGAGAATTGACCCCCTATATATG CATGCACCAAGAGGTGCCCAAGTATGTTCTTCTTTGCCTGTACTTTTCAATTTTGAGCTCTTGGACTGACTTGAGTATTG AATTGTGTTTATGGGCTTTCCATGGCATTGCATTTAAAATGTTGTAAACAAATACACCATTGCTTGCCCAATTTGTGTTG ATTTATCAACTTTTTTTTTTTGCATGCCTGTATGGCCATCAGAACTTGTAATTTCACTTCTATGGATTGTTTCAATATCA GAATTTTGGTGTTTAGCTATATGTAGTTGTTTTGGGGCCAACTTTGGCATTCATTTAGAAACCTGGAATACCTTTTTTTT TGTTTTGAAGACCAAGCATGTTTATTAGAACAATCGTGTGTGCTAGATTTATGTATTTACGTGGTTGCATATTTATGCAT TTGACATGGACAAAAAAAATGGATCAACGAGTTGCTAAAATTACTTGCAAAATAAACTCCCAAACAGGTCAATGGTCTGA TTGCGGGAGCTGTGGCAGGTGCATCTGTTGCTGTTGCTGCCGGGACACGGAAATGGACGCAGGTGATTGGAATGACAGGT TTTGTTTCTGCTTTTTGTGCTGCAGCTGACTACTCCAGAACATCTTAAAATGACATGAGAAACCGTGGGCAGAGATATTT GATCCAGGTTTCTTGGAAGACATCAACAAGCAAAATTCTTTGCTATTTGGTAGTTTTCAAAGATTGTATTTTTTTTTTGT TATTTATGTGTTTAGAATAATTTAGTCTTGGTTGAGGTTCTCTTTATACATGATAACACTAAACAAGACAAAAATACTAT GTAAAATGCACACACATCATGGTCTTACAACCACATTGTACATTTCCTTATGACTTCAATTAGGAGAATTTTTCACCAAG GGGCTTCCTATAAAGCGGGTTCGAGACTTGAATGAGAGTGTTGTGTGATTTAGTTACCATAATTAGTAGAAATATGACTT CATAGTTTAGTAATTAGGAAAGATATAGGTTAGGGTTAATTATGTTTTTTATCCCTAAATATTGAGTGAGGTTTAGTTTT AGTCCCTCCTCGTAGTAAAATTGCAAAATTACCTTTGCATTTGTAGAAATACCCCACTTTTAGTTTCAGCGGGAGAGAAA GCTCATGTGACCTTGCCTATATGTACGTCTAAGGCGATTTGGCAT
CDS sequence (LotjaGi5g1v0250400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGACCTCAACAACGTGGTTCCATGCTCCTCCCTCGCCGTCGAGTCTAGCCTCCGCGTCGGAACGGCTGGTGC AATCTGGGGCTTGTGTTATGGTCCCTATGAAGCTCGTCAACAGGGTCTTACTGGCATTCCACGAGTTTCTTTTGTGGCGA ACACGGTCGGCAAGTTTGGGATTCGATGCGGACTTGTAGCTGGAGTTTTCAGCATTACGAGATGTAGGATTCAGCAATAC AGGAGGCAAGATGATTGGGTCAATGGTCTGATTGCGGGAGCTGTGGCAGGTGCATCTGTTGCTGTTGCTGCCGGGACACG GAAATGGACGCAGGTGATTGGAATGACAGGTTTTGTTTCTGCTTTTTGTGCTGCAGCTGACTACTCCAGAACATCTTAA
Protein sequence (LotjaGi5g1v0250400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEDLNNVVPCSSLAVESSLRVGTAGAIWGLCYGPYEARQQGLTGIPRVSFVANTVGKFGIRCGLVAGVFSITRCRIQQY RRQDDWVNGLIAGAVAGASVAVAAGTRKWTQVIGMTGFVSAFCAAADYSRTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 131 | 131 | 7.4E-66 | ||
| PANTHER | 1 | 131 | 131 | 7.4E-66 | – | |
| Phobius | 1 | 85 | 85 | - | – | |
| Pfam | 16 | 119 | 104 | 8.8E-12 | – | |
| TMHMM | 51 | 73 | 23 | - | – | |
| Phobius | 86 | 106 | 21 | - | – | |
| TMHMM | 86 | 105 | 20 | - | – | |
| Phobius | 107 | 111 | 5 | - | – | |
| TMHMM | 109 | 126 | 18 | - | – | |
| Phobius | 112 | 129 | 18 | - | – | |
| Phobius | 130 | 132 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | TIM22 mitochondrial import inner membrane insertion complex | A multi-subunit complex embedded in the mitochondrial inner membrane that mediates the inner membrane insertion of multi-transmembrane spanning proteins that contain internal targeting elements. In yeast cells, TIM22 is a 300-kDa complex, consisting of four membrane integral subunits, Tim22, Tim54, Tim18 and Sdh3, and a peripheral chaperone complex consisting of the small TIM proteins, Tim9-Tim10-Tim12. | ||
| Biological process | Protein import into mitochondrial inner membrane | The process comprising the import of proteins into the mitochondrion from outside the organelle and their insertion into the mitochondrial inner membrane. The translocase of the outer membrane complex mediates the passage of these proteins across the outer membrane, after which they are guided by either of two inner membrane translocase complexes into their final destination in the inner membrane. |
Expression pattern of LotjaGi5g1v0250400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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