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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0265900 |
| Transcript ID | LotjaGi5g1v0265900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exostosin-2; TAIR: AT5G04500.1 glycosyltransferase family protein 47; Swiss-Prot: sp|Q84WB7|GT645_ARATH Glycosyltransferase family protein 64 protein C5; TrEMBL-Plants: tr|A0A0B2S0C1|A0A0B2S0C1_GLYSO Exostosin-2; Found in the gene: LotjaGi5g1v0265900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57681879..57686401) extracted from Lotus japonicus Gifu genome v1.2.
GGAGGCGGCGGTGGTTCTAGTGGTGGTGGTAGCAGTAGTTGCTGTGACATGAGTCTCAAGTGTTGGTGTAGGTGGAGATT GGAGGGCCAACAGTGTTATAACCGGTTCTTCTCTTCTGGTTTCGTTTTCTTCTTCGGGTGTTTCGTTTTGTTTGGATCGA TTGCTACCCTTTATGGTTGGCTCGCTTTTTCTCCCACTGTGCACACTGCTTTGTCTCCTTTTGGTTGTCAAGTTGACAAT GAGGGTTCTTGGTCAATTGGGATTTTCTTTGGTGACTCTCCTTTCTCTCTAAAACCCATAGAGTCTGTAAGTTTCTTCTA TCTCTCTCTAATTTGCTCTTTTTTTGTCCTTGGGGTTTTTTTGTGGGTTTACTGTGTTATTTTTCATATGCATGGTTGTG TTAATTGTTAATTTCTCTCTGAAAGTTGTCAATTTTTGAAAGAAAAATTAGGATAAAAGTGATTTTATTTTTGCAAGTTT TCACACACTCTAGATGATGATTACTTGAGTAGTGTTTGGTATTATGGAGTATGATGTTGAAAATTTTGGTTTTGTTCTGG TGAATTGATCAAATATGAAATTATTTCAATTGGGAATTTGTTTTGTGATGTGAATTTGAGGGATGAAATTGTTTCAGTTC GTTTCAGTTGATGGTTTTGGTTCTGTGCAGACGAATGTATCGAATGATGACAGCGCTGCTTGGCCGGTTGCGAACCCCGT GGTGACGTGTGCCTCGGTCTCTGATGCTGGTTTTCCCAGTAATTTTGTTGCTGACCCTTTTCTTTTCATTCAGGTAATAG GGTCTTGTCACTCTAGCTTCCTTCATATATTTGATGTTTCAGATTCTTTGATATAGTTCAAGTCCCTTTCCCTTGCTGTT TTTTGTTCTATTTGTACATTTTTTGCCAGCAAAATTCTACCTATGTTTACATGCCGTTTTTTTTGGCCAAGTCAATGTTT GGATTCAACCACTAATCCACAATGATAGAAGCCTGGTGTTAGAAAAAGATAATACATCAGTTTGTCTTTATTTCTACAAT TAATTTGCCTGTTTTTGGAGATATTTGCTTGGAGTTTAAATTTGACACGAAGCAGTTGTTTAGGCTTTTTCTCAGGCTGA AAGAAGCCTGGATCTAAACTAGTAATATTTTGTAGTTGCTTGAGGTAATTCCAGAATTATTTATGGTAAATGAGAAACCA TCAAACCGTTGAAAATTTGAAGATGGAGGTCAGAAAATGTCTAAAACATTAAATTGAGAAATGAGATGAAAATTTATAGC TAGGTTGGGTTCATGTGATATCTTGTATGTTTTTATTGTCTGCAAAATCCTGCTCCTAAATACAGGTTAGGTTGTGTGGG TGACGATTTCACAGTAAACCCGTCTATTTTTTGTACTGTTAAGGAGCTAATATCAGTTTACTGAATAACAAAAGTTGGCT TCTACTTACTCACTGTATGTATCCTTCTGAGTTGTGCTGTCATCACATAGCTGATAACTATACTAATTGGGGTCCTCTTT TGGATTTAAAAAGAAACATGGGGCCCTCTTGGTCATCCATATATTGAAGATTTTGACTAGTTTTATGTTGGCTGCCGAGG CCTAACACAACCCTCTTGGTTATCCATGTTGTAAAATTTATAATAAAGCTAGTAGGAATAGGTCCAATTATATAGTGAGC GCCTTGAATAGTTGCATAATCTCCATTTTATCAATTTTTATTTTAAAATTTACATTTTGATTCAACTAGTGGTACTTACT GCGTAGAGGTGATTTATTGAGTACTGTCAACCTGATTTTTCTGCCTTTGGACCATCATATTTTGCTTGGGGTAGGAAAAA ATACTGTGTAACATCCCTGAAAGTTCTTTTCTGGAGTTGTAAACGAAGTTGCTTTCTTACAAGGATGGACAATTGTAGAC TCTACATTTGAACTATGTAGGTTTTTCTAAGTGTCTTTAAAAAGAGTGGCCTCATAGACAAGGCTCTCACCACAGTAGGA AGAATGTTTGAGTTTTGTCAAGGGAAGATATAACAGGTGAATTAGGTCCAATATTGGATAACAGGGTGGCATTTCTATGG ACTTGTTCTGACAAAACGAGTAGTGCCTTTCGTGCATTTTACTCTTAAATAGTAAAATTTCATAATGGATAGAATCAATT TTTTTTATCTCCTCTGTCAAATTTGTCTGCCTAACAGTCAGTTTATCAGTTGCTTCTGAAAGGTTACAACAAAATATTGC CTTCATTATTTGTGTTTGTATCTACTTCAGCCTTATGCCCATATAGGTGTCTGTCCATCGTTTAAACTATTTATCTTGTT GGTTTGAAACCTGAGTTTGTACTTTGTACTAATGTTTGATAGACAGTTTCCAAAGAAAATATAGTATTCAAAAAGCCTAT AAATGTTTGTATTTTTACAAATCAGGACATGCTTGATCATGTTTTATGTAGATATATCAGTGATGACCGATGAGAAATAT TAATGGAAAAGAGTTAATATCACATTATGAACTATTCACTGATATGACATTTGCAATTCAGGGAGATACTCTGTACCTGT TCTATGAGACAAAGAATTCAATAACAATGCAAGGTGATATCGGAGTTTCAAAAAGTACTGATAAAGGAGCAACATGGCAA CAGCTAGGAATTGCCTTGAATGAGGATTGGCATCTTTCTTATCCATATGTTTTTGAGCATGATGGCCAGGTATTTTTCCT AAGAAATGATGTGTTTGTTCATGCATTTGAACTTGTCTAATGGCTCATTTACGACTTAAACTTGTCATTATAGTTGTTGT GATCCTCATTTTTCTTTTCCCAATTGTAACTTCACAGATATATATGATGCCTGAGGGAAGTAAAAGAGGAGATCTTCGTC TCTACAGAGCAGTTAACTTCCCTTTGCAGTGGAGATTGGAAAAGGTCATAATGAAAAAGCCCCTTGTTGATTCCTTCCTT GTCAATTATGGTGGTAAGTATTGGCTTTTTGGCTCAGATCATAGTGGTTTTGGCACGAAGAAGAATGGGCAGCTTGAGAT TTGGTATAGCAGTTCACCTCTTGGTCCTTGGAAACCTCACAAGAAAAATCCCATTTATAACATTGACCAGAGCTTGGGAG CTCGCAATGGAGGCAGGCCATTTGAATATGAAGGAAATCTTTATCGTATGGGTCAGGACTGTGGGGATACATATGGGAGA CGGGTGCGTGTTTTCAAGATAGAAACTCTTACTATTGAAGACTACAAAGAAATTGAAGTTCCATCGGGGTTTGTTGAGCC AAACAAGGGGCGAAATGCTTGGAATGGTGCTAGGTACCATCACTTGGATGCGCAACGTCTGCCATCTGGTGGCTGGGTTG CTGTTATGGATGGGGATCGTGTTCCCTCCGGGGATTCAACCCGGCGGTTCATGGTTGGTTGTGCTTCTGTTACAGTTGCT GCTGCGCTCATTTTGCTATTGGGCGTGTTACTCGGATTTGTAAATTGTATTGTTCCTCTCAATTGGTTCATTCATAACTC TGGGAAGAAGAATGTTGCTATATTGTCTTGGGAAAGATCAAATGTGTTCTCTTCAAAAATAAGACGGTTTTGCAGCCGCT TGAACAGGGCCCCAAATTTTCTCCGGGGCAAGATAAAGCACAATGCTTGTGCCAGGAGGTTTGTTCTTACTGTAATATTT GTAGTGGGGGTCGGATTGATGTGCGTAGGATTTAAAAATATCTACGGGGGTAATGGTTCAGAAGAACCTTATCCATTCAA AGGACAATATTCCCAGTTCACCTTATTGACAATGACCTACGATGCTCGTCTCTGGAACTTGAAGATGTATGTGAAACACT ACTCAAGGTGCTCTTCTGTAGGGGAGATAGTTGTGGTGTGGAACAAGGGAGTCCCTCCAGAATTGAGTGATCTAGATTCT GCAGTACCAGTGAGGATCAGAGTAGAGGAGAAGAACTCTCTCAACAATCGCTTCAAGGCTGACCCGTTGATAAAGACACG CGCTGTCCTCGAGCTTGATGATGATATTATGATGACATGTGACGATGTTGAGCGAGGTTTTAACGTGTGGCGTCAGCATC CGGACCGTATCGTTGGATTCTATCCTCGGCTTATCAGTGGGAGCCCACTGAAATACAGGGGAGAAAAATATGCCAGAAGC CATAAAGGGTACAACATGATTCTCACCGGCGCAGCGTTTATTGATTCCCAAGTAGCTTTCAAGAGGTACTGGGGTGAGGA GGCCAGGCAAGGGAGGGAAATGGTGGACAAGTTTTTTAACTGTGAGGATGTGCTTTTGAATTATCTGTATGCAAATGCGA GCTCATCGTCGAGGACGGTTGAATATGTGAAACCGGCTTGGGCCATTGACACTTCAAAGCTTTCTGGCGCGGCTATTAGC CGGAACACGAAGGTGCATTATGGATTGAGAAGCCATTGCCTTATGAAATTCTCAGAGATGTATGGAAGCTTAGATGGTCG GAAATGGGGATTTGACAGTAGGAAAGATGGTTGGGATGTATAG
CDS sequence (LotjaGi5g1v0265900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGGTGATATCGGAGTTTCAAAAAGTACTGATAAAGGAGCAACATGGCAACAGCTAGGAATTGCCTTGAATGAGGA TTGGCATCTTTCTTATCCATATGTTTTTGAGCATGATGGCCAGATATATATGATGCCTGAGGGAAGTAAAAGAGGAGATC TTCGTCTCTACAGAGCAGTTAACTTCCCTTTGCAGTGGAGATTGGAAAAGGTCATAATGAAAAAGCCCCTTGTTGATTCC TTCCTTGTCAATTATGGTGGTAAGTATTGGCTTTTTGGCTCAGATCATAGTGGTTTTGGCACGAAGAAGAATGGGCAGCT TGAGATTTGGTATAGCAGTTCACCTCTTGGTCCTTGGAAACCTCACAAGAAAAATCCCATTTATAACATTGACCAGAGCT TGGGAGCTCGCAATGGAGGCAGGCCATTTGAATATGAAGGAAATCTTTATCGTATGGGTCAGGACTGTGGGGATACATAT GGGAGACGGGTGCGTGTTTTCAAGATAGAAACTCTTACTATTGAAGACTACAAAGAAATTGAAGTTCCATCGGGGTTTGT TGAGCCAAACAAGGGGCGAAATGCTTGGAATGGTGCTAGGTACCATCACTTGGATGCGCAACGTCTGCCATCTGGTGGCT GGGTTGCTGTTATGGATGGGGATCGTGTTCCCTCCGGGGATTCAACCCGGCGGTTCATGGTTGGTTGTGCTTCTGTTACA GTTGCTGCTGCGCTCATTTTGCTATTGGGCGTGTTACTCGGATTTGTAAATTGTATTGTTCCTCTCAATTGGTTCATTCA TAACTCTGGGAAGAAGAATGTTGCTATATTGTCTTGGGAAAGATCAAATGTGTTCTCTTCAAAAATAAGACGGTTTTGCA GCCGCTTGAACAGGGCCCCAAATTTTCTCCGGGGCAAGATAAAGCACAATGCTTGTGCCAGGAGGTTTGTTCTTACTGTA ATATTTGTAGTGGGGGTCGGATTGATGTGCGTAGGATTTAAAAATATCTACGGGGGTAATGGTTCAGAAGAACCTTATCC ATTCAAAGGACAATATTCCCAGTTCACCTTATTGACAATGACCTACGATGCTCGTCTCTGGAACTTGAAGATGTATGTGA AACACTACTCAAGGTGCTCTTCTGTAGGGGAGATAGTTGTGGTGTGGAACAAGGGAGTCCCTCCAGAATTGAGTGATCTA GATTCTGCAGTACCAGTGAGGATCAGAGTAGAGGAGAAGAACTCTCTCAACAATCGCTTCAAGGCTGACCCGTTGATAAA GACACGCGCTGTCCTCGAGCTTGATGATGATATTATGATGACATGTGACGATGTTGAGCGAGGTTTTAACGTGTGGCGTC AGCATCCGGACCGTATCGTTGGATTCTATCCTCGGCTTATCAGTGGGAGCCCACTGAAATACAGGGGAGAAAAATATGCC AGAAGCCATAAAGGGTACAACATGATTCTCACCGGCGCAGCGTTTATTGATTCCCAAGTAGCTTTCAAGAGGTACTGGGG TGAGGAGGCCAGGCAAGGGAGGGAAATGGTGGACAAGTTTTTTAACTGTGAGGATGTGCTTTTGAATTATCTGTATGCAA ATGCGAGCTCATCGTCGAGGACGGTTGAATATGTGAAACCGGCTTGGGCCATTGACACTTCAAAGCTTTCTGGCGCGGCT ATTAGCCGGAACACGAAGGTGCATTATGGATTGAGAAGCCATTGCCTTATGAAATTCTCAGAGATGTATGGAAGCTTAGA TGGTCGGAAATGGGGATTTGACAGTAGGAAAGATGGTTGGGATGTATAG
Protein sequence (LotjaGi5g1v0265900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQGDIGVSKSTDKGATWQQLGIALNEDWHLSYPYVFEHDGQIYMMPEGSKRGDLRLYRAVNFPLQWRLEKVIMKKPLVDS FLVNYGGKYWLFGSDHSGFGTKKNGQLEIWYSSSPLGPWKPHKKNPIYNIDQSLGARNGGRPFEYEGNLYRMGQDCGDTY GRRVRVFKIETLTIEDYKEIEVPSGFVEPNKGRNAWNGARYHHLDAQRLPSGGWVAVMDGDRVPSGDSTRRFMVGCASVT VAAALILLLGVLLGFVNCIVPLNWFIHNSGKKNVAILSWERSNVFSSKIRRFCSRLNRAPNFLRGKIKHNACARRFVLTV IFVVGVGLMCVGFKNIYGGNGSEEPYPFKGQYSQFTLLTMTYDARLWNLKMYVKHYSRCSSVGEIVVVWNKGVPPELSDL DSAVPVRIRVEEKNSLNNRFKADPLIKTRAVLELDDDIMMTCDDVERGFNVWRQHPDRIVGFYPRLISGSPLKYRGEKYA RSHKGYNMILTGAAFIDSQVAFKRYWGEEARQGREMVDKFFNCEDVLLNYLYANASSSSRTVEYVKPAWAIDTSKLSGAA ISRNTKVHYGLRSHCLMKFSEMYGSLDGRKWGFDSRKDGWDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 160 | 160 | 3.5E-12 | ||
| PANTHER | 1 | 598 | 598 | 5.9E-267 | ||
| PANTHER | 1 | 598 | 598 | 5.9E-267 | – | |
| Phobius | 1 | 231 | 231 | - | – | |
| SUPERFAMILY | 5 | 185 | 181 | 2.43E-18 | ||
| CDD | 33 | 140 | 108 | 6.97154E-5 | – | |
| Phobius | 232 | 262 | 31 | - | – | |
| TMHMM | 240 | 262 | 23 | - | – | |
| Phobius | 263 | 315 | 53 | - | – | |
| TMHMM | 316 | 338 | 23 | - | – | |
| Phobius | 316 | 337 | 22 | - | – | |
| Phobius | 338 | 602 | 265 | - | – | |
| Gene3D | 351 | 591 | 241 | 4.0E-68 | ||
| SUPERFAMILY | 354 | 584 | 231 | 3.23E-16 | ||
| Pfam | 355 | 585 | 231 | 3.0E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi5g1v0265900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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