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LotjaGi5g1v0279400.2

Overview

Field Value
Gene ID LotjaGi5g1v0279400
Transcript ID LotjaGi5g1v0279400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I1LD68|I1LD68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:59465011..59467874) extracted from Lotus japonicus Gifu genome v1.2.

CTAAGTTGTATATGGATTAGATGTTCGCTATAAAAAAGCATGACAAGAAATATAACCCATCACTCATTAGTCATTAGTAA TAGTCCATGGAATTAGAAGAAGTTATAAACTTACGAGAATTAAGTTACATTTTAGAACTTTAGAACCTAACCACTCTTTT CTCTCAAAAATCTGCTTCTTATTATTATACTATATACAATACACAATTATATACTACCAAAAAGCCCTTCACTGGGTACT ATGATTCCACTTGCGGGTTGACAGTTCTGGAATTATAACCATGGGTTTTGAAATTAAGGTGGGAGCCGTATAGCTAAGTG CCTTTGATGGCTAGCCTACAGAATTTTTGCTGGTTGGAATTGAGAATAAATTGCTGGTTGTATTTGATTGGGTTGTTGGT TAAACAGTGGATGTTTTGGATTTGTTTCTGGGACTGGTTGACTGGTTGTTATTTAGTTTGTGTGTGCTTTTCTTGCTTTG CTGCTTGTATTTGCTTTTATGCTTTTATTTTCCTACTAATTTATATTAAGGATTGGAGTACCTTGTACTTTCTTTTAATG CATTCTTTGGCTTATTATGAAAAAAACTTGCAAAACAAAAAAAAAGTTTTGCCTATATAAAGAACACTCTAGAGTAACTG CCAATGCCACTTAACTACTTAAGCAAGCAAGTAGAACATTAAGAGCAGTACTTGAGCTAAAAGTAGTCAAAATGGGAGAT TCCTATTCCACCAAAGATGAGCAGTTCAAAACTTCCCCTGAACAAACAGAGGATGCTGCTTGCTTATCAGCAATGCTGGC CTGTACCAATATAGTATACCCTGCAGTTCTGAATGCTGCAATTGAACTCAACTTGTTTGAGATCATAGCTAAGGCAACAC CACCTGGTGCCTTCATGTCACCCACTGAAATTGCTTCTAAGATCCCAACCCAACACTCAGATTTACCAAACAGGCTTGAA CGCATGCTGCGTTTGCTTGCAAGTTACTCCATTCTTACTTTCTCCACTCGCACCACTGAACATGGTAGCACTGAGAGAGT TTATGGGCTCTCCCAAGTTGGAAAATACTATGCCCCTGATGAAAGTCAGGGCTACTTGGCTTCCTTTGTTCCATTTCTCT ACTATCCACCACTGCTACAGGTTTGGTAAGTGCTTTTAGTTCATAATTACTTATGCTAGTTCACATGCTAAATTCTCTTG CTTCATTGTTCATAACTAAATTTATTTTCAGGTCGAACTTCAACGAAGCGGTGGTTGACGAAGACATTGATGTGTTTAAG AAACTTCATGGTGTGACCAAGTACCAGTACATGGAAAAGGATCAAAAAATGAACCAAATCTTTAACAAGGCAATGGTCGA TATCTGTGCAACAGAGATGAAAAGAATGCTTGCAATATATACTGGATTTGAGGGAATATCAACATTGGTTGATGTTGGAG GTGGACATGGACAAAATCTCAAAATGATAACCTCCAAGTACCCTTTGATAAAGGGTATCAATTTTGATCTGCCCCAAGTT ATTGAAAATGCACAATTGATTCCAGGTACCCTGATCAAGTATATAATGTTTTATATAAGAGTAATGAAATATGAAAACAC ACATTTTACTATACATATAACACACACATACTTCTCTAGCGATTATTAATGGTTGCAAACATTAACGACTGTTAAAGACT GCCGCTACACTGTATGTCGAAATGATGTCAACCAAAAGCTTATATTGGGGCATCATTTCCGTTTCTCTAATTACCATGAA CATGTGAAATGATAGAAGTTTTTTTTATAGGCAAATGTTAGTTGTTAGTAAATTAATTCATCCTTAGGGTTCGAACCCTT GACTCTTCACCCTTCATTCCTCTCAATCCTTATGTCCTCTAACTCTTACCATTTAAGCTAACTCTCGGGACATGTGAAAT GATATAAGTATACTTATTTTTTTAGTAATGTATTGTTTAAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAACTGTTC CCCATGGTGATGCCATAATACTCAAGGTAAGTAAGTACTATATACATATTAAATACCAATATATCTAACTCATTACTTGT GATTGATAGATTTAATTATCTAACCTCATTATATGATGCTAACAACAAACCTTTTAATTTCTTGACCTTGTTGATATGAC TGTAGGCTGTGTGCCATAATTGGTCAGATGAAAAATGTGTAGAATTTTTAAGCAATTGTCACAAAGCATTGTCACCAAAG GGGAAGGTGATTGTTGTGGAGTTTATATTGCCAGAAGAACCAAAAGCAACTGAAGAATCCCAACTTGTTTCTAGTCTCGA CAATATCATGTTCATCACAGCTGGTGGAAGGGAAAGGACTGAGAAACAGTTTGAGAATTTGTGCAAGCTCTCTGGATTTT CCAAATTTCAAGTTGCTTGTCGCGCTTTCTCTACTTTAGGAGTGATGGAATTCTATAAATAGGTTCATCACTCTAACCAA CCTCAAATATAAATAATTTGATATTAGGTAATCAACAATATTTAAGAACAAAAATTTAAATAAATTTTTATAAATGATAA TGTTGGTCCACTTAAAATTGAATTATTTATTAATTCCGAAGAATAAGTTAGAGAACTCTTAAAAGTTATGGTAATAGAGT AAAAGTGATAATAATGACCTTTATATGAGGCCAAAGTTACTTCTTGTACTTTTTTTTTTTTTTGCTTAATAATGACCTTT ATATGAGGCCAAAGTTACTTCTTGTACTTTATGCTTTGATGTGATATGTGATATGATGTAATTTTTCCAGTGTTATTAGT GAGTTCTTAATCTGTTAGTTCTCTACTGAACTACTTAATTAATCTAAGTTATTGCCTGCTGCGG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0279400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAGATTCCTATTCCACCAAAGATGAGCAGTTCAAAACTTCCCCTGAACAAACAGAGGATGCTGCTTGCTTATCAGC AATGCTGGCCTGTACCAATATAGTATACCCTGCAGTTCTGAATGCTGCAATTGAACTCAACTTGTTTGAGATCATAGCTA AGGCAACACCACCTGGTGCCTTCATGTCACCCACTGAAATTGCTTCTAAGATCCCAACCCAACACTCAGATTTACCAAAC AGGCTTGAACGCATGCTGCGTTTGCTTGCAAGTTACTCCATTCTTACTTTCTCCACTCGCACCACTGAACATGGTAGCAC TGAGAGAGTTTATGGGCTCTCCCAAGTTGGAAAATACTATGCCCCTGATGAAAGTCAGGGCTACTTGGCTTCCTTTGTTC CATTTCTCTACTATCCACCACTGCTACAGGTTTGGTCGAACTTCAACGAAGCGGTGGTTGACGAAGACATTGATGTGTTT AAGAAACTTCATGGTGTGACCAAGTACCAGTACATGGAAAAGGATCAAAAAATGAACCAAATCTTTAACAAGGCAATGGT CGATATCTGTGCAACAGAGATGAAAAGAATGCTTGCAATATATACTGGATTTGAGGGAATATCAACATTGGTTGATGTTG GAGGTGGACATGGACAAAATCTCAAAATGATAACCTCCAAGTACCCTTTGATAAAGGGTATCAATTTTGATCTGCCCCAA GTTATTGAAAATGCACAATTGATTCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAACTGTTCCCCATGGTGATGC CATAATACTCAAGGTAAGTAAGTACTATATACATATTAAATACCAATATATCTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0279400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGDSYSTKDEQFKTSPEQTEDAACLSAMLACTNIVYPAVLNAAIELNLFEIIAKATPPGAFMSPTEIASKIPTQHSDLPN RLERMLRLLASYSILTFSTRTTEHGSTERVYGLSQVGKYYAPDESQGYLASFVPFLYYPPLLQVWSNFNEAVVDEDIDVF KKLHGVTKYQYMEKDQKMNQIFNKAMVDICATEMKRMLAIYTGFEGISTLVDVGGGHGQNLKMITSKYPLIKGINFDLPQ VIENAQLIPGIEHVGGDMFATVPHGDAIILKVSKYYIHIKYQYI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.10.10
4 120 117 8.8E-39
IPR036388
PANTHER
PTHR11746
17 273 257 4.7E-130 –
PANTHER
PTHR11746:SF208
17 273 257 4.7E-130 –
SUPERFAMILY
SSF46785
21 124 104 4.08E-26
IPR036390
ProSiteProfiles
PS51683
28 284 257 45.478
IPR016461
Pfam
PF08100
39 90 52 4.0E-19
IPR012967
Gene3D
G3DSA:3.40.50.150
122 277 156 6.3E-39 –
SUPERFAMILY
SSF53335
127 273 147 2.07E-27
IPR029063
Pfam
PF00891
145 271 127 1.0E-33
IPR001077

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0279400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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