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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0280300 |
Transcript ID | LotjaGi5g1v0280300.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Calcium-dependent protein kinase, putative; TAIR: AT1G35670.1 calcium-dependent protein kinase 2; Swiss-Prot: sp|Q38869|CDPK4_ARATH Calcium-dependent protein kinase 4; TrEMBL-Plants: tr|A0A072VP17|A0A072VP17_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi5g1v0280300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59539836..59543986) extracted from Lotus japonicus Gifu genome v1.2.
CTCGGCTTCTCCACCAATGAATATTGAAAGAATGAAAAGAATTCCAATGTTGTAATAAATTGACAATTGTTAATTTGTTA TGTTAGGACAAGAAAAGGGAAAATAAAAAGGGTGACAAATCTTAACAGAAAACAGTTAGTTACGTGTGAACAGGTTCTTG TTGAGAGAGAGAAAACAAAGGGAAAGAAGAAGAGAAAAGATCCAAATTTCAATCACACCCATTTCAGATTTTCACCATTG GAATTGCGAAATGCAGAAGCAGAGTTTTGCAGGATCAAAATCCTCTTCAAAATGCACTGCGGTGTTGCCATACCAGACCC CAAGGTTAAGGGATCACTACCTTCTGGGGAAGAAGCTGGGTCAGGGTCAATTCGGCACCACGTATCTTTGTACTCACAAG GCATCAGGGAAGCTTTACGCCTGCAAATCGATCCCGAAGCGAAAGCTTCTATGCAAGGAGGATTATGATGATGTGTGGAG GGAGATTCAGATCATGCACCATTTGTCTGAGCATCCTAATGTGGTTCAGATTCAAGGGACCTATGAGGATTCTGTGTTTG TGCATTTGGTCATGGAGCTTTGTGCTGGTGGTGAGCTTTTTGATAGGATTATTCAGAAGGGGCATTATAGTGAGAGAGAG GCTGCCAAATTGATTAAGACTATTGTGGGGGTTGTGGAGGCTTGTCACTCTCTTGGGGTTATTCATAGGGATCTTAAGCC GGAGAATTTCTTGTTTGATACCCCTGGCGAAGATGCTAAGATGAAGGCCACCGATTTCGGTCTCTCTGTGTTCTACAAGC CAGGTTGATTTCTTGTTCTTTATCTTTTGCTTTTAATTTATTGTGATTGTAATGATTAGGAGATTCAATTTTGTATGATG TTGGCATGTTGTTGTTGAAATGAATGAGGGAAATTATTAGCATTGCTTTATGAGAGGTGTTTCTTTCTTGATTTCGCAAT GTTGATGATTGTTTCTTTTTCCAAAAGCAATGCATGGTATCTTCTATCATGTGCAGCTTCTTTCTGGGTTTGTTTTGATT CGATTTTCTGAAATTAGCTAGCTGATCGATTAGGGGGTGATGTTTAAGTATTTTATTCATAACAGCCAGCTGCATATTTT TGTTTTCACAGGGTAGATTTCTTTGAATTGATTGTATTGGGGTTGTGATATATTTTAGAATCTCTTGATGTCTCTAGGTT CATCCCTCCTCCTATTCTGAGCATAAATTCTTCTTACTCTAATACTTTGTATTGAATTTCATAATGCATATACATCTTAG GCAATTTTAACCAGTGCACTTGCCATATGCTCAGCAAATTTGTTATTGATTATCTTGGCAGGATGAAGCTCCCAAGAACA TTCTTTTTCATGGTTGTTGAGAGAAATATAGTTAGGGCTAAGGGGTTGAATGTTTAAAGAGCAATATTCGGCAATTTAAA CATATATTTTTCCCTTGGATTTTCAACCTTACTTTTTTGTTTATTTTTCAGGACAAGCCTTTCATGATGTAGTGGGAAGT CCCTACTATGTTGCCCCTGAGGTGTTGTGCAAGCACTATGGACCAGAAGTGGATGTATGGAGTGCTGGTGTAATCCTATA CATCTTATTGAGTGGGGTGCCACCTTTTTGGGCTGGTAATGATCCTAATGTGTATTGTAATTCTCTTGGACTTGCACCAG TTAACCTTTTATTCTCTGTATAATATTTAGTCATCTACTTGTTATCTTTTTTGTGCCTGAGCTACATTCACTTTCTCTAT TACCTATAGAAACCGAAGCAGGAATTTTCAAACAGATTTTACATGGAGACCTTGATTTTGTGTCTGATCCATGGCCAAGC ATCTCAGATAGTGCTAAAGATTTGGTAAAACTGATGTTGGAGAGGGATCCTAGGACAAGAATTTCTGCTCATGAAGTTTT ATGTGAGTTCCTTGGATACAATTTGTATTTGGATTTTCATGTGCTACTGGTGTATGCCAAGGCATTTTAGTGTACCAGCT TTGTAAAATATCTAACAATAATGGAGTTTGTACAATCAGGTAACCCTTGGATTGTGGATGAAGAATTTGCCCCTGACAAG CCTCTTGATTCTGCTGTTTTGACACGCCTAAAGCATTTCTCAGCAATGAATAAACTTAAGAAGATGGCACTGCGTGTATG TTTAATTATCATTATACAGCTCATCCTTTTCTGTTTGATTTCAATATTGATGTTAATTCTAGCTACTTTGTGGTTGCTAG TTTGTGACTTTAAAGCTGTATAGTGCTTTTTTTTTTTGCTCCGCAATTAAGGGTTCTGAAAAAAGTAGAATGCATTGATT TTGATTCCTATAGTCTATAGATCCTGGAGAGTGATCTGATTTGTATTAGAAAATCAAAGCTGTCTGGTTGTGAGAAACTC CTGAATGCCTAATATCAACTTTTATTCATTTCTTAAATAGTTTGATAAGTAAATCTAAGTAATGAACTTATGTTTAACAT TTTAAAATTATTTTCAGGTCATTGCTGAAAGACTTTCAGAGGAAGAAATAGGGGGGTTGAAAGAGTTGTTCAAAATGATT GACGCTGACAACAGTGGCACAATAACTTTTGAGGAACTCAAGAATGGTTTAGAAAGTGTGGGCTCTAATCTCATGGAATC TGAAATTAAATCCCTTATGGAGGCGGTAGGTAGATTATAGTTATCATAAATGTCACAGAAAGGAAGGAGTTTCATGCTAT TTCAAATAGGTTCTTATTATTGCTGTCTTCCCTTGTGAGCTTTTGCAGGCTGATATAGACAACAGTGGAACAATAGACTA TGGTGAATTTCTTGCTGCGACAATGCACTTGAATAAGATGGAAAGAGAGGAGAATTTGATTGCTGCATTTGCCTATTTTG ATAAAGATGGTAGTGGTTACATCACCATTGATGAACTTCAACAGGCTTCTAAAGACTTTGGCCTTGGTGAAGTACATCTG GATGAAATGATCAAAGAGATTGATCAAGACAATGTAAGTTCCTCTAAATGTGTTTGCATAATTACCAACACATGGTGATG CGATTGTGGTCACTCTATTTAATTTCACTAACAACTTCATTGTTGATTCTATTTTCAGTTTTCTCAATTAATTTGATGGA CATAGTCCGAACTTATTATCTATGAGATTAGTGAAAGTGAACTAAGTTTTTAATTTCTTGATTCTTTAAAAAGTCATCCG TCATCATTACATGACTTGGATGCTTCTGGAAAGTTTAGTGGAAGCAACTTTTTTGGTTAATGCAAAATATGGCTATTGTT GCAAATTGTGGCTGGGTTCTCTGAGGTATTACTGAAGATGTATCATGCATGATAATGGGTTTTGAAAAACTCATTGCAAG TCTTAAATTCAATCATCATGTATTAGGTTGTGAAATATGAATTTGGTTCTTTATAGCTAATTGTGGATTTAAGTATATTG CTGTTTTCAGGGCAATTTTGTTTATGCTAATAACTCTTATAAGCCCTTTCCTTTTTCTCTGATATTTGATTGAAATTATC TAGGATGCCTTTCTCTCTTATATTTGTTGTGGTTACAATCTATTTTGGTTCTATTTCTCTAATCTCTTTTTTCAGGATGG GAGAATTGATTATGGGGAGTTTGTAGCGATGATGAAACAAGGGGATGCTGATGCTGTGGGTAGGAGCAGAACCATGAAAG GAAATTTGAACTTCAACATTGCTGATGCATTTGGAGTGAAAGATTCTTCTTGATATGCTAACTGAAATATCTTGTACAGT TAGGAAGCAAGGTGGTAGAAGAGAATCAGTCATATTTACTTAGCTATATAATTGTGATCTAATTTACATTTGAACTTTGT TAACTTTCTTCAGCAATGGTTTAATCAATTTCCTTTCTTTAGAAACATTTAGCGAATTTGAATATATTCAGCATCACACG TAATGTAATTGGCTTGAGTAGAAACAAGCCAGAGGAATGAGGACAAAATACCATTTGTGGGATAGCATTAAAAAAGGAAG CAAGGGTAGGTGGTTTATGTGAGGTGAACTTTCAGCCCAAAGAAGATGGGTTGCTTTCACCAAAGAGAAAGGGAATACTA GGTCTATGCCCTTGTAATGTGAATGTTGTGCTATTATTTCCCAAACCAACAGAGAAAGGTGTTAATATAAC
CDS sequence (LotjaGi5g1v0280300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAAGCAGAGTTTTGCAGGATCAAAATCCTCTTCAAAATGCACTGCGGTGTTGCCATACCAGACCCCAAGGTTAAG GGATCACTACCTTCTGGGGAAGAAGCTGGGTCAGGGTCAATTCGGCACCACGTATCTTTGTACTCACAAGGCATCAGGGA AGCTTTACGCCTGCAAATCGATCCCGAAGCGAAAGCTTCTATGCAAGGAGGATTATGATGATGTGTGGAGGGAGATTCAG ATCATGCACCATTTGTCTGAGCATCCTAATGTGGTTCAGATTCAAGGGACCTATGAGGATTCTGTGTTTGTGCATTTGGT CATGGAGCTTTGTGCTGGTGGTGAGCTTTTTGATAGGATTATTCAGAAGGGGCATTATAGTGAGAGAGAGGCTGCCAAAT TGATTAAGACTATTGTGGGGGTTGTGGAGGCTTGTCACTCTCTTGGGGTTATTCATAGGGATCTTAAGCCGGAGAATTTC TTGTTTGATACCCCTGGCGAAGATGCTAAGATGAAGGCCACCGATTTCGGTCTCTCTGTGTTCTACAAGCCAGGACAAGC CTTTCATGATGTAGTGGGAAGTCCCTACTATGTTGCCCCTGAGGTGTTGTGCAAGCACTATGGACCAGAAGTGGATGTAT GGAGTGCTGGTGTAATCCTATACATCTTATTGAGTGGGGTGCCACCTTTTTGGGCTGAAACCGAAGCAGGAATTTTCAAA CAGATTTTACATGGAGACCTTGATTTTGTGTCTGATCCATGGCCAAGCATCTCAGATAGTGCTAAAGATTTGGTAAAACT GATGTTGGAGAGGGATCCTAGGACAAGAATTTCTGCTCATGAAGTTTTATGTAACCCTTGGATTGTGGATGAAGAATTTG CCCCTGACAAGCCTCTTGATTCTGCTGTTTTGACACGCCTAAAGCATTTCTCAGCAATGAATAAACTTAAGAAGATGGCA CTGCGTGTCATTGCTGAAAGACTTTCAGAGGAAGAAATAGGGGGGTTGAAAGAGTTGTTCAAAATGATTGACGCTGACAA CAGTGGCACAATAACTTTTGAGGAACTCAAGAATGGTTTAGAAAGTGTGGGCTCTAATCTCATGGAATCTGAAATTAAAT CCCTTATGGAGGCGGCTGATATAGACAACAGTGGAACAATAGACTATGGTGAATTTCTTGCTGCGACAATGCACTTGAAT AAGATGGAAAGAGAGGAGAATTTGATTGCTGCATTTGCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGATGA ACTTCAACAGGCTTCTAAAGACTTTGGCCTTGGTGAAGTACATCTGGATGAAATGATCAAAGAGATTGATCAAGACAATG ATGGGAGAATTGATTATGGGGAGTTTGTAGCGATGATGAAACAAGGGGATGCTGATGCTGTGGGTAGGAGCAGAACCATG AAAGGAAATTTGAACTTCAACATTGCTGATGCATTTGGAGTGAAAGATTCTTCTTGA
Protein sequence (LotjaGi5g1v0280300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKQSFAGSKSSSKCTAVLPYQTPRLRDHYLLGKKLGQGQFGTTYLCTHKASGKLYACKSIPKRKLLCKEDYDDVWREIQ IMHHLSEHPNVVQIQGTYEDSVFVHLVMELCAGGELFDRIIQKGHYSEREAAKLIKTIVGVVEACHSLGVIHRDLKPENF LFDTPGEDAKMKATDFGLSVFYKPGQAFHDVVGSPYYVAPEVLCKHYGPEVDVWSAGVILYILLSGVPPFWAETEAGIFK QILHGDLDFVSDPWPSISDSAKDLVKLMLERDPRTRISAHEVLCNPWIVDEEFAPDKPLDSAVLTRLKHFSAMNKLKKMA LRVIAERLSEEEIGGLKELFKMIDADNSGTITFEELKNGLESVGSNLMESEIKSLMEAADIDNSGTIDYGEFLAATMHLN KMEREENLIAAFAYFDKDGSGYITIDELQQASKDFGLGEVHLDEMIKEIDQDNDGRIDYGEFVAMMKQGDADAVGRSRTM KGNLNFNIADAFGVKDSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 478 | 478 | 0.0 | – | |
PANTHER | 1 | 478 | 478 | 0.0 | – | |
SUPERFAMILY | 26 | 299 | 274 | 5.13E-86 | ||
CDD | 29 | 287 | 259 | 2.63371E-138 | – | |
Gene3D | 30 | 113 | 84 | 3.2E-161 | – | |
SMART | 30 | 288 | 259 | 3.9E-101 | ||
ProSiteProfiles | 30 | 288 | 259 | 48.004 | ||
Pfam | 32 | 288 | 257 | 2.4E-73 | ||
ProSitePatterns | 36 | 59 | 24 | - | ||
Gene3D | 114 | 291 | 178 | 3.2E-161 | – | |
ProSitePatterns | 150 | 162 | 13 | - | ||
Gene3D | 292 | 465 | 174 | 3.2E-161 | – | |
SUPERFAMILY | 327 | 467 | 141 | 3.64E-46 | ||
ProSiteProfiles | 331 | 366 | 36 | 15.322 | ||
SMART | 335 | 363 | 29 | 1.3E-6 | ||
Pfam | 336 | 396 | 61 | 2.5E-10 | ||
ProSitePatterns | 344 | 356 | 13 | - | ||
ProSiteProfiles | 367 | 402 | 36 | 10.859 | ||
SMART | 371 | 399 | 29 | 7.8E-4 | ||
ProSitePatterns | 380 | 392 | 13 | - | ||
ProSiteProfiles | 403 | 438 | 36 | 14.151 | ||
Pfam | 406 | 467 | 62 | 7.9E-12 | ||
SMART | 407 | 435 | 29 | 0.011 | ||
ProSitePatterns | 416 | 428 | 13 | - | ||
ProSiteProfiles | 441 | 472 | 32 | 12.784 | ||
SMART | 441 | 469 | 29 | 5.2E-7 | ||
ProSitePatterns | 450 | 462 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0280300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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