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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0282400 |
| Transcript ID | LotjaGi5g1v0282400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-type tyrosine-protein phosphatase; TAIR: AT1G71860.1 protein tyrosine phosphatase 1; Swiss-Prot: sp|O82656|PTP1_ARATH Protein-tyrosine-phosphatase PTP1; TrEMBL-Plants: tr|Q6J2K7|Q6J2K7_PHAVU Protein tyrosine phosphatase; Found in the gene: LotjaGi5g1v0282400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59862300..59867936) extracted from Lotus japonicus Gifu genome v1.2.
AAGAAATTATAAGTCATAACAATCACGAGTAACAACAGATAAATAAGAGAGTCATCCGAAAGGTCTCTTCAAACCTTAAA CAATAGCATACAATTTGTCTCAAATTAGGAGGTCATGAGCCCGACCGGCATGTATCCCAAAGATCTCTATCTCTTATTCC TTTCTTTATTTACTTACTTACATCTCATTCATAACAAAACCAACTATGTATAGCCTCCATGTACCGAATTCTTTACCCAT TGCGTATGGCGAACCAGGTAACTATGTGACCAACATTAGCATTCACTTCAGTGCAACATCACAATAAAGCCGTCATCAGC ATAGGGAAAGCAAAAGGCACTCATTCACTCACTCACTCACTCTTCTCCGCTGGGGAATCTCGTCTCCACCTGCTGTCGTC CCCGCCGGAGATCCACCATGGCCGCCGGCAACTCCTCATCTCCCTCCCCCTCCGTATTTTCTCACGAGATTTTGAATTTC TCCCCCGATTCCCCCACCCCAATCTCTCTCACTCCCGACCAGCTCAAGCACTGCACCCAAGCGCTCTCCTTGTTCAAGCA GAAGCTCCTCAATCCTCACACCATCTCCCAAGAGTTCGCTTACTTGCAGGTACCTACCTTCCCTCGATCGCTCGCTCGCA CTTTCAATTCAATTCAATCATTTTGAAATTGAAACCCTCGGTTTCGTGTTGTTGTGTTGTGATTCCAGACGAACAGGTTT ACACCGAGTCAGATGAAGAGGAGTTGCAACGTTGCTCTTGATCCTGTCAATTCCAGCAAGAATCGATACACTGATGTGAT CCCATGTAATAAATTCACCACTTAATTCTATAATTGTATTGTGTTTTAATTTTTCTAGGAAATTGATTTCTACTTGTTTG ATTCAGTTGATAAGAACAGGGTTGTTCTGAAATCAAGCACTGATTATAGGCCTGCAGCATTGGGGTATATCAATGCAAGC TTTGTCTCGGTAGAATTATCGTTTTGTGAATATTCTATTTTGAAATTGCTTTGTTGTGACTTGTGAGATTAGCCCCGTTT GGAAGAGCTTATTTGATAGCATAAGCTCTTATGCCAGTGTTTGGGAGAGCTTACGCAAACAGCTTATGGTAGGACCATAA GCTGTTTTGAGCTTATTTTCATAAGGATAGCTTATGAAAAAGAGCTTATGCTTATATATTGCTTATGACTTATGAGTTAT GACTTATGACCATAAGCGCTTAATTAAGCTGTGTTTCCAAACAGGGCCTAAATTCTTAGTTTTGAGTGACTTGCCCTTTG TATTGTAGACATCTTCCCCTGGAGTTGTAGCATCCCAGTTTATAGCCACACAAGGCCCGCTGCCGCACACTTATGAGGAT TTCTGGGAAATGGTTATCCAATATCACTGCCCTGCAATTGTGATGCTTACTAGGTTGGTCGACAATTACAAGGTGCTTGC CTGCTTGGCACTTGCTGACTCGCTCTACTTGATTGGTTTTACCCTCTTCGTGTTTTATTATTGATGTTTTTCACCTCTTT TTTTGTAGATGGTAAAGTGTGGAGATTACTTTCAATCTGAGGATGGACCTAGAGAATTTGGAAATATCTCTGTTAACTGT AAATGGGCGAAAACCACTGAAGCTTCGTTGGTGCTGCGCCATTTAGAGGTGAACCGTAGCGAGGTGGGATGATTTTTCAG CTTATAATAGTTGTGCTGGTTATGTTATATATGGAAAACAGAACACACAGCTTTGCAAAGTTTGCCGGTTGTGTAAATAT TTGTGGCTTATGTTACTCTTCCATAGTTAAGTGATGTATCGTAAGCTTTGAGGAGGTACAAATACCATAATTATGATAAG TAAACTTTGAAAATATATCCACATAACCTTTCTTGTTTCTTTCTGTCTTCTGGTTTCCTCTAATTTGGAAGATTGTATGA ATCCTCCCCTTGGCTGTTTATTCCCCCATTTCTTTCAAATAATTTTTTTTTCTAGAGAACAAAAATCCATCTGCATAAGA TTTCCTCTGTTTTTTAAAATGTGATGTATACCAAGTTAGGTTGGAAGAGGGGTGTCTCGTTTTTAAAAAATAACTTTTAT GTTAGGGCCATAAGATGGCGCTCTGGTGTTGGGCTGGCTAGACACAGACAGCTTGAATGATACTATTCATTTATTGTTAA AACCATACTCGATATTAGTTAATGAAAACTAATTTCCAAATTATAATTTGCTTTAGACTGATGATGCCAATTGCGTCAAT GCATACCAGCCTGAAATATTTTCATCTCAGGTTATATATCTGGAATCTTGCTTTTTCAAAGAATCCTATTTTCTATCGAA CATAATTTCCTTTTTTATCAAAAGTTTTATGTTTTTGTAATTTGTTTTGATTATGGACGGCCATTTAATTTTCTCTCCTC TATAAATATGTATAGCATTCTAGTTCATACCTTCAGTTGATATTGTTACAGGGTGAAGGTGCACCATTATCTGTTTTGCA TATTCAGTATCCTGAATGGCCTGACCATGGAGTTCCGAAAGATACATCTGCTGTGCGTGAAATTTTGAAAAGATTATACA ATTTACCACCAAACCTTGGCCCAATAGTGGTGCACTGCAGGTTCATTTCACTCCTTTGTTTATTCATTTTATGGCGATCA TAACAGTAGATCACATGCATATTTGTCTGAAATAAACTCTCTCACTCAGTGCAGGTATTGGTAGAACTGGAACATACTGC ACCATTCACAACGCTATTCAGAGAATACTAGCTGGGGATATGTCTGCTGTAGATATTGCAAACACAGTAGCTATGTTCAG GTCCCAGCGTATCGGAATGGTACAGACTCAGGTAGTTGGATTTTCTAATTTATATTTAATTATGATTATGGAACATTTGA ACTGGTTAAGCATGCCACAAATTAATTGCATCTGAATTCTGACATTAATTCCATTTCTAAATTAAATAAAAATGCGAGGG GCTTTGAAATCTAAGGACAGCGGTGATAAGGTAACCTATGTTGTTTGATGGCAAAGAAGGGAGATGCTGAAGGAACTAGC TAGATGATTAGGCAAGGATGTAGTTACAAATTTGATGTTTGAAAGAACTCTAATCTCCACCTGTGGAAAATCTATTAATT CCTTTCTCTCTGTTGACATGAGAAGAATTATTTATTACTTGGAAAGGGAGCTCCCACTACTAGTCTCTGTTTCTGAAATA AATAAAAAGCCAAGAAATTTTTTAAGCCTAAGAATGGAGGTGCTAGGCTACCCTAGATAGGTTCACTGATAATGAAGGCA GGCTGGTGCTAGGAACAAAGGTAGAGTTAGGCAAGGATGTATCCACAAATTACTATCAGGATGTAGAGGAACCCTGTTCT CCTCCAGATATATTAATCCCTTTCTTTTTGTTTTCATAAGAAGAGTTGTTTATTTCTAGGTAAGGAGGTTCCTTTTACTA GTTTTTGTGTAGAGCTAACCAGTTAAGGCAATGGAGAAGATCTAAGGAGGCTCTCCCAAAGTACTCTAAGAAATCAAATT GGATACATCTTGTTACCCCACCCCCCCCCCCCCCCCCCCCCTTCTTTACAAACAAAGAAGAAATGTGAAGATACTAGACC AGGTTATAAGCTTGAATAAAAAGTGAAGATATCACATAAGGAAGATAATTTAAACACAATAGTAAACATTCAACAACTTG TGTCCTGTCTGACTACATTTACATTCATTCATCGGGTACAAGATAAGTTATGACCCAGTTATTATGCATTTTCCTCCAAC AAATGTCTTTGGTCTACTATTATCAAGATTGCTTTTGAACCCAATCTCCAACACTGATGAGATTCTCATAACATGACTGC ATATAGTAGTTCTAAGTCGAATATTATTTTGTAAGTTTGGTTTGAATCTTTGAGATTGGGGATCTAGGAAATTTCTTTCT TAGTAAATTGCACGACCTCCTGTCTTGTTTCAAAAATTATATGACCAGTTTGGAATTTTCATCAGATATATACCTATGAA AGTCTTCTATAGACACATCATATACATATGAAAAATCAAAGACAAGGGAATTTAGTGGAAATTTCTAAAGCAAGAGGAGA GGTCTGGGTAATTGAGGAAGGTCACATTCTGCTTTGTTGCCAGCAGGCTGGCCTTTTGGTTGAGGAGGCTTTAGTTTCCC AGTCACTTGGAATCGATCCCAGTCAGGCACCTATTTTACAGTTCTGGTCCTTCCCAATGTCGTTTCTCTCGGCCCCAATA ACTTGAACCACTTACCTTATTGTTGTTGTTATTATTGTTATTGTGATCTTGCCTTTTCCTTTTTGAACTTTTTGGTGACA CTTGCTGCAATCTATCAGGAACAGTATATTTTCTGCTATGAAGCTATCATGGATGAACTGGAAGACCTTGTATCTCAACA GCACTGAGAGTAGAAGGGTACATCCTTTACTTTTGCAGTTTCACAAATATTACTATACTGCTCAGATCCTGAAATCCTTC TATATAGGATTGGATTTGTATTTCGGTTTTCTGTTTTCTGAAATTCTATTATAACCTTGTTGAAATTATTATTTTGCTAG CTTGATAATTGCTGTCCAGTGCTGGACCAAAGGATGCTAAGCTTCTGGCCTCATATTGAAGCCAACTTTCAATTCTTCCG TTTTCAATTTAGGTCCTGCAATGCTTATGTCTCCCGGCAGCTGAGTCTGACAGAACTCATGTTATTCTCAAGCTTTCATG TAAAATTGCAGGCAGGGGAAAGCTAAAAATATCAGCATCATTTTCATTTATATTTTACTAGAATTATGTTGGACGTAATG ACTACAATAATGTAAAGTCCATTGTCCTACCTTAGGCTTTATAGTGCATAAAAGCCATTAACGACCTCTAATGAATTTGA ATATTCCACTCCCACCTGTTGTTGATGTTGAAGATGTAATGTTGGGGATGAGATGGCCATCTCATTTCCGTTCCTCAATC TGTTTTTTTCTTTTTGCATTTAGATTTGACACGTTGACTAAAATGTGGATTGACGTTGAGTTCAACGAAATTTCAAATAT GCATTTAAAATAAAATTCTCTCAAATGAAAAATCTGAAATTCTCCCCTTCTCTCAAGGTTCTTACTTTTTACCAATTACA AATGTGTTTTTTCTCAAAGGAAGGTTTTATCCTATTTTCTTTGTCCAAAATGATTGAAGTAAATGATGTTTTTGGTGCTT TTCTAACAAACCCCTTGACATCCAAACAATGTGGTACTGTCTTAAGTGAGATGTGTGGTTGCTATGGGCATGAGGGTGAG GGCTGTCTGATTTTCCATGTTTCACACTTTCACCGATTTGTGCATATATAAGAACTAGCTAGATTTCCTCTAGGCAAGTT TAGAAATTCACAAGTGAGATAGTCAGAGTCATAGTTTGCAGTTGCTACAATTTGACCAACTGCAACTTTTTAGGCTGGCA CTCTGGTCCTACATATCTTTGCGATGATTGAAGAGTCACCAAACCATTCTTTGGCATGTAGACTAGGTGCCAACTTCAGA AACTTTCCAGTTGAGTGTAGAGTTTTAGCATAAGTGTAGAGAGTACAGATGCTATATGCAATAAGCCCATCTTAGCAAAG AAAATCTGAAACATGGGATCAATAACTACATGACAAG
CDS sequence (LotjaGi5g1v0282400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCCGGCAACTCCTCATCTCCCTCCCCCTCCGTATTTTCTCACGAGATTTTGAATTTCTCCCCCGATTCCCCCAC CCCAATCTCTCTCACTCCCGACCAGCTCAAGCACTGCACCCAAGCGCTCTCCTTGTTCAAGCAGAAGCTCCTCAATCCTC ACACCATCTCCCAAGAGTTCGCTTACTTGCAGACGAACAGGTTTACACCGAGTCAGATGAAGAGGAGTTGCAACGTTGCT CTTGATCCTGTCAATTCCAGCAAGAATCGATACACTGATGTGATCCCATTTGATAAGAACAGGGTTGTTCTGAAATCAAG CACTGATTATAGGCCTGCAGCATTGGGGTATATCAATGCAAGCTTTGTCTCGACATCTTCCCCTGGAGTTGTAGCATCCC AGTTTATAGCCACACAAGGCCCGCTGCCGCACACTTATGAGGATTTCTGGGAAATGGTTATCCAATATCACTGCCCTGCA ATTGTGATGCTTACTAGGTTGGTCGACAATTACAAGATGGTAAAGTGTGGAGATTACTTTCAATCTGAGGATGGACCTAG AGAATTTGGAAATATCTCTGTTAACTGTAAATGGGCGAAAACCACTGAAGCTTCGTTGGTGCTGCGCCATTTAGAGGTGA ACCGTAGCGAGGGTGAAGGTGCACCATTATCTGTTTTGCATATTCAGTATCCTGAATGGCCTGACCATGGAGTTCCGAAA GATACATCTGCTGTGCGTGAAATTTTGAAAAGATTATACAATTTACCACCAAACCTTGGCCCAATAGTGGTGCACTGCAG TGCAGGTATTGGTAGAACTGGAACATACTGCACCATTCACAACGCTATTCAGAGAATACTAGCTGGGGATATGTCTGCTG TAGATATTGCAAACACAGTAGCTATGTTCAGGTCCCAGCGTATCGGAATGGTACAGACTCAGGAACAGTATATTTTCTGC TATGAAGCTATCATGGATGAACTGGAAGACCTTGTATCTCAACAGCACTGA
Protein sequence (LotjaGi5g1v0282400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAGNSSSPSPSVFSHEILNFSPDSPTPISLTPDQLKHCTQALSLFKQKLLNPHTISQEFAYLQTNRFTPSQMKRSCNVA LDPVNSSKNRYTDVIPFDKNRVVLKSSTDYRPAALGYINASFVSTSSPGVVASQFIATQGPLPHTYEDFWEMVIQYHCPA IVMLTRLVDNYKMVKCGDYFQSEDGPREFGNISVNCKWAKTTEASLVLRHLEVNRSEGEGAPLSVLHIQYPEWPDHGVPK DTSAVREILKRLYNLPPNLGPIVVHCSAGIGRTGTYCTIHNAIQRILAGDMSAVDIANTVAMFRSQRIGMVQTQEQYIFC YEAIMDELEDLVSQQH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 334 | 318 | 3.2E-146 | – | |
| PANTHER | 17 | 334 | 318 | 3.2E-146 | – | |
| Gene3D | 31 | 335 | 305 | 2.7E-89 | ||
| SUPERFAMILY | 36 | 329 | 294 | 2.31E-84 | ||
| SMART | 55 | 329 | 275 | 2.8E-112 | ||
| ProSiteProfiles | 56 | 327 | 272 | 45.399 | ||
| Pfam | 85 | 325 | 241 | 4.2E-75 | ||
| PRINTS | 116 | 123 | 8 | 5.9E-37 | ||
| CDD | 117 | 322 | 206 | 9.62693E-136 | – | |
| PRINTS | 135 | 155 | 21 | 5.9E-37 | ||
| PRINTS | 223 | 240 | 18 | 5.9E-37 | ||
| SMART | 224 | 326 | 103 | 3.7E-39 | ||
| ProSiteProfiles | 246 | 318 | 73 | 19.09 | ||
| PRINTS | 261 | 279 | 19 | 5.9E-37 | ||
| ProSitePatterns | 264 | 274 | 11 | - | ||
| PRINTS | 294 | 309 | 16 | 5.9E-37 | ||
| PRINTS | 310 | 320 | 11 | 5.9E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein tyrosine phosphatase activity | Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Biological process | Dephosphorylation | The process of removing one or more phosphoric (ester or anhydride) residues from a molecule. | ||
| Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of LotjaGi5g1v0282400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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