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LotjaGi5g1v0283100.2

Overview

Field Value
Gene ID LotjaGi5g1v0283100
Transcript ID LotjaGi5g1v0283100.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A0S3SNE1|A0A0S3SNE1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:59958684..59963140) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGTAGTAGTAACATTGTCAATCATGGAATTTGCCAGACCCTTCCAATTATGTTACAAATTGTTCTTGTGTTTCTGAT TATATGTTCTTGTGTTTTGAACAGGTGATGCATTACATAGCCTGAGGACAAATTTACAAGATCCTAACAATGTTTTGCAA AGTTGGGATCCTACACTTGTCAATCCATGCACATGGTTTCATGTAACATGCAACAATGATAACAGTGTCATAAGAGTGTA AGCTGCTTGTTCTTTACAATCGTCACAGATTTGCTCATACTTTCCAAACAACTTCTTCTCAGAGAACGACTTTCTAATGT TCACTTCTGTTTTTTTTTTCTTCCCTTTGGTTGATGTCAGTGATTTGGGAAATGCTGCTTTGTCTGGTCAACTTGTTTCA CAGCTTGGCCAACTCAAGAATTTGCAGTATTTGTATGTTATCATGATCCAATGCTCTTTTCCTTTTATCATTATAATTTT CTATGGGCTTGGTTAATAAGTGATAACTATTGTTTCAGTTTTCTTGTTTCTCATTTATTTTTTTTTCCCTATTGTTTTCT TGTTACATAACAGGGAACTTTACAGCAATAACATTACCGGCCCAATTCCAAGTGACCTGGGGAATCTTACTAACCTGGTG AGCTTGGATCTGTACCTAAACCGTTTCACTGGCCCTATCCCAGATTCGTTGGGCAAGTTGGCAAAGTTGCGTTTCCTGTG AGTATGCCTATTTTTTGTGCTAAATTTCATTCTTTTTGTTCATGATACTTCTTTTGTGTTGTATACATTGTTTCTCTTAG TGTGTATTAGGAAATAAATATGCTCTCAAGTCAAGTTTTATCTTACTGAGGTCAGATGTTGACGTGATTAAAGAACTTCT ATAAGAAATTTGAAATTTGAAGCTACATTTGGAGCGTGCTACATCCATAAAGACTGATTTGGTGTGAATTATGTGGATGT TGACTGCTGAAAAAAAAATAGCAGTATTGAAATCTGTTTTATCATTTATTTTTGGAAATATAAACCATTAAAGAGAACAT GTTACTGAAATAGAAGTGAACCGGTAAAGTGAAAAAACACTTATGTTACTTAATTTGCTATCGTTTTAGTGAATAGTATA AGCATGTGTTCCGGCGTTCGTGAATCTCCATTTTCTTATTTATCTGGGTATCGGGATAGATCTTAATACTGCTCTTCTGG TATGTTTGTCTAAGGATAGCCGGCTTAACAACAACAGCCTGAGTGGTCCTATTCCCTTGACACTGACTAATATTTCTTCT CTCCAAGTTCTGTAAGTGTTACTTCATCTCAACATATGCATTTCATTTCTCTCTTCATTACTTGTATGCTATACTAATAT AATTTTTTTTACTTGATTCTTCAAATGTAGGGATTTGTCTAATAACCGTCTCTCAGGTCCGGTTCCTGATAATGGCTCCT TCTCATTATTCACTCCTATCAGGTTTCTGACTTAACTTTTGTGTTATCCATTGGTTTGATTTGTAAAATTTACTGACGGA GCTTTCTTTCTGCTTTCAGTTTTGCAAACAACTTGGGTCTGTGTGGACCAGTAACTGGGCACCCTTGTCCAGGCTCTCCT CCATTTTCTCCTCCGCCTCCATTTGTCCCACCACCCCCAATTTCTATCCCAGGTAATCTTTTCTCTGCTGCATGCTCTTA ATTATAAATGTTATTTTCTTAGCCTCGATTGTAACTTAAAGCATGGGAAATTGGGAAGGGCAATTGCTATTTTTTAAGAA GGGTTTCTTCTAGGGGCTCACTTTTTTAACTTTTTTCAATGAACTGATCGTTAGTTATGGGTGTAAATATTATGTTTTTC ACTAGCTCTTCTGTTCCTTTGTGAGATAGTTTCTGTTGTTTTACATAGGTAATGTCTGTAATAGGTTTTTGTTTTTCTTT GGCGGGTTTGGTTTTGGCATGACGCTGTGGCTTTATGGTCTGTCCTTTGTCGGGAGGACTTGTATCTCGGCTCGATTATT ATTCAATATATCTCTGGCTTCGGAAAAAAAAGTGGTTGTGATAGGTTTAAGATCTGTTTATGCTGCTACATGGTTTTTAT TTGTATATGTATGTATGTGATGATAAACATGAAGAGAAGAGAAGCACTGATGTTTCAACCTTCCTATATCCAATTGCAGG AGGTAATAGTGCCACTGGGGCAATAGCTGGAGGAGTTGCTGCAGGTGCTGCTCTATTGTTCGCTGCTCCTGCAATTGCAT TTGCATGGTGGCGTCGAAGGAAACCGCAAGAATATTTCTTTGATGTGCCTGGTGAGAAATCCTAGTTGAACGACAACTGC ATTAGTTGAATTTGTTTGAAGGATAGATTTTGATATCCTTGCATATATTTGCAGCTGAAGAGGATCCTGAAGTCCATCTT GGGCAGCTTAAGAGGTTCTCATTACGAGAACTGCAAGTTGCAACCGATACTTTCAGCAATAAGAACATTCTTGGGAGGGG CGGATTTGGTAAGGTGTACAAAGGACGCCTGGCAGATGGCTCATTGGTTGCTGTCAAAAGATTGAAAGAGGAGCGCACAC CTGGGGGAGAGCTTCAGTTTCAGACTGAAGTAGAGATGATTAGCATGGCTGTGCATAGAAATCTCCTGCGCTTACGTGGG TTCTGTATGACACCAACGGAAAGGTTACTTGTGTATCCGTACATGGCTAACGGCAGTGTTGCCTCGTGCCTAAGAGGTGA ACCCTCTGCTTCTTTCTTGCACTTGCTATTTCTTGTCGTGGCATGTTCAAACAATCATAATGAAAAGGAGAAAAACTTCA CGTCTGTGCGCCTGTGGTTTGTTCAAGTCAAAACTTTTGGTTTAACAGAAACCCCTAGCTTCCAAACCTGTAGAGGTCTT TATGGCTTTAGCTCTTTTTCTTATTTGATGTCCGTACATCCTTCAAAGCATAGTTTCTTGGCCATCTTTGATTTTTTTTT TTAATTGTTTGTTAACTGCCAAACTTCACTTTAAATCTGATGATCCTTCAGCTTGGAGAAAATATTATCTAGGCTTTTTT TTGGGGGAGGGCTGGAGTTTCTATAGGAAAAGTGTATTCCCCAAATTCCCATAATTCAATCCAACAAGAGAAGAAAAAGC AAAAACACAAGTAAATGAACTGGTTTTTATAGATATATTAGCTTCAATGCCAAACTTGAGGAAACTCCAAGGTGTATAGT ACTATAGTGACAGATCTATGCCTTGTGCCTCATAAGGTTTTTTTTTTTTTAATTAAAGAATCGGCGAGTGAAATGTAACT TAAGCTAGACCACAGGTAAGGAAACTTGTACTGTGAACCCATCTATACTGATTGTATGCTAAACGTTTCAGTATTTATTA TTTTCTTGTGATTTTGTATTTGCATTTTTCTAGAGCGTCCTCCGCATCAAGAACCCCTGGATTGGCCCTCAAGGAAAAGA ATAGCTTTGGGATCAGCAAGGGGTCTATCGTATTTGCATGATCATTGCGACCCAAAGATTATTCATCGTGATGTGAAAGC TGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGGGACTTTGGTTTGGCAAAACTAATGGATTACAAGGACA CCCATGTGACAACTGCAGTACGGGGCACAATCGGGCATATAGCTCCCGAGTACCTATCTACTGGTAAATCTTCAGAGAAA ACTGACGTTTTTGGTTATGGTATCATGCTTCTGGAGCTGATTACTGGACAAAGAGCTTTTGACCTTGCTCGGCTTGCAAA TGATGATGATGTTATGCTGCTTGATTGGGTATGTTTAATGCAAAAACATGTCCTTCTGTTTCTGTGAATCATAGTTTACC TTTAGAGTTAAATCTCATGCAACCCTTCAGTAATTGTCAATAATGTAATGTTGAAATTTGACAAAGCTGAACATATTCAT AGGTAAAAGGTCTTCTGAAAGAGAAAAAGCTTGAAATGCTGGTTGATCCTGATCTACAAACCAACTATATAGAAGCTGAG GTAGAACAGTTAATCCAGGTTGCACTGCTCTGCACACAAGGTTCCCCAATGGAACGACCAAAGATGTCGGAAGTGGTGAG AATGCTTGAAGGTGATGGCTTGGCAGAAAGATGGGATGAGTGGCAGAAAGTGGAAGTTCTCCGCCAGGAATCGGAGCTGG GCCCTCATCCCAGTTCTGATTGGATTGTTGACTCAACTGAAAATCTACATGCAGTTGAATTATCTGGTCCAAGGTGACCA TGGCATAGTAGTAAGAAAGAAAGAAAAAAGAATGGAATTATTTATGACTTATTTTTTAACTATAAAAGCTTTTTTTCTCT TTCTTTTTTGGTTTCCTGAAGTACCATGTCCTCTTGTAAGTTCACTGCATTGTATTCATTTACATTTGTGCATAGGGGTC GCTTTGTCAAGTTGCAATTTGTATCATCTGCTGCAGTTTGATGAAGTGATGTTTACT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0283100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTAGCATGGCTGTGCATAGAAATCTCCTGCGCTTACGTGGGTTCTGTATGACACCAACGGAAAGGTTACTTGTGTA TCCGTACATGGCTAACGGCAGTGTTGCCTCGTGCCTAAGAGAGCGTCCTCCGCATCAAGAACCCCTGGATTGGCCCTCAA GGAAAAGAATAGCTTTGGGATCAGCAAGGGGTCTATCGTATTTGCATGATCATTGCGACCCAAAGATTATTCATCGTGAT GTGAAAGCTGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGGGACTTTGGTTTGGCAAAACTAATGGATTA CAAGGACACCCATGTGACAACTGCAGTACGGGGCACAATCGGGCATATAGCTCCCGAGTACCTATCTACTGGTAAATCTT CAGAGAAAACTGACGTTTTTGGTTATGGTATCATGCTTCTGGAGCTGATTACTGGACAAAGAGCTTTTGACCTTGCTCGG CTTGCAAATGATGATGATGTTATGCTGCTTGATTGGGTAAAAGGTCTTCTGAAAGAGAAAAAGCTTGAAATGCTGGTTGA TCCTGATCTACAAACCAACTATATAGAAGCTGAGGTAGAACAGTTAATCCAGGTTGCACTGCTCTGCACACAAGGTTCCC CAATGGAACGACCAAAGATGTCGGAAGTGGTGAGAATGCTTGAAGGTGATGGCTTGGCAGAAAGATGGGATGAGTGGCAG AAAGTGGAAGTTCTCCGCCAGGAATCGGAGCTGGGCCCTCATCCCAGTTCTGATTGGATTGTTGACTCAACTGAAAATCT ACATGCAGTTGAATTATCTGGTCCAAGGTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0283100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPSRKRIALGSARGLSYLHDHCDPKIIHRD VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR LANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYIEAEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWDEWQ KVEVLRQESELGPHPSSDWIVDSTENLHAVELSGPR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000654
1 244 244 2.3E-26 –
ProSiteProfiles
PS50011
1 240 240 28.994
IPR000719
SMART
SM00220
1 227 227 5.8E-10
IPR000719
Gene3D
G3DSA:3.30.200.20
1 30 30 1.3E-5 –
PANTHER
PTHR27001
3 261 259 1.2E-135 –
PANTHER
PTHR27001:SF637
3 261 259 1.2E-135
IPR031048
Pfam
PF00069
5 225 221 2.5E-33
IPR000719
SUPERFAMILY
SSF56112
5 228 224 6.52E-59
IPR011009
Gene3D
G3DSA:1.10.510.10
31 247 217 1.2E-68 –
ProSitePatterns
PS00108
76 88 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004675
Molecular function Transmembrane receptor protein serine/threonine kinase activity Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005102
Molecular function Signaling receptor binding Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0283100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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