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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0299500 |
| Transcript ID | LotjaGi5g1v0299500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Signal peptide peptidase-like protein; TAIR: AT4G33410.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1; Swiss-Prot: sp|Q93Z32|SIPL1_ARATH Signal peptide peptidase-like 1; TrEMBL-Plants: tr|A0A0L9TZP0|A0A0L9TZP0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0299500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61594544..61599250) extracted from Lotus japonicus Gifu genome v1.2.
GCGTCTTCAAACTCAGAGGGACCTAGGTTCCCAACAGAGCAGCCATCGATATTGAGCGAAACGAAACCCGTCCTAGACGG AATCCATCAAACCCAACGCTCTGTCGCAGGAGCCGCCGAGCGATGAAGAGCACGAGCCACCAACACCTAAAGGGATCGAG CTTCACGCACCACCTGAAATGCCTCATGGTTAGAACCAGCAAACAAAGCTCTATACCTAGCTTGCCAAATCGTTCAAGTC GTCGATAAAATCAGCAGCAAGCTGAGCCCCTCAAATCCGCGCAATACCTCCGAAACATCTTGGAGCGTGAAGAAGGTTGT CGGGAACACAAAATCGATCACACTCCAAACCTGTAACGAGTCCAGACCATCCCTTAAATGCACAAACCATTTTTCATGGT GAATAAATATATTTTACCATTTTTTTAATAATGTTTTTAGTGATTTCCAAAGATGCAAGCATCACGCAAGCGCGTTCTTA AAGGGGGAGTTTTGGAAAGAAAAAGAAATATTGGGGCGAAAATGAAAATCTAGATAGATTGACATTCACTTCACTTCACT TCACTTCACATTGAGAAAGGTGGAGTGGGTTTCTTCATCTTCAACACTGAGAGAAAGCAAAGGGGTCTCTGAAATCTCTG CCAATAGTCCAAGGTTAGTCCTTCCCCAAAACCCTAATCCCCCAAATTCCACTTCTTTCTTCTTCCAGATCGTATTTTCA TTTCATCTTCTTGATCGGTTTTCAGAAAAAAGTTTCACTCACCGATTCAAATTTTTCAACATTTACATCATATGTCGGTG TCAGTGGGCGTTGTTTCTTCTGTTAATCAATGTAATTGTGACAAAGAAGATGAATGGTGATTGAAATTTTGGGTGCAAGT GCAATGCTAGGTTCAATTTGCTATGTAGTTTGAAAATTTAGGGCAAAATTAATAGTATCAAATTCTTGTGCTGGCTTTGT TTGCTTCAGATAGATGATGCATCTTGAGTGAAAAAGTTTGATTTTTTTTTTAATGGGTAGGATTAAAAATTAAAATAGAA TGACAGGATTCTATTAGGGTTGGTTGTTATTTGTTTTGCAACTAATGTGCTTACTTACAAGCTTCCTTTGCTAATATGCA GGTTGTATGGTTTTAACTGCTTAGTTTTTCGCATCCGCAGAAGGATAAAACTTTGCAACTTTGGTTGCAAAGTCAATTGT TGAGTTGTGTTTCTATGTATGAAAGCTGGGTTTGAGTTGAGATAGTTGTGTGTGCCTTTTGTAAGATGGAATCCCTTTGG AAACTTTTGTATTTGCTAGAGCCTGCACCTGTCACACTTATCACAACGGCTGTAGCTGTGACGTTTGGGTCTGCGTTTCG AGCTCTAAACTATGGGAAAGAAATGGAGCGCAATCGTGACTTCTCTGAAGCGTCCATTACGTTGGATAGGTCCCAAGCGT TGATGATCCCGGTGATGAGCTCTGTTAGCTTGCTTTTGATGTTCTACTTGTTCTCATCGGTCTCGCAGCTTCTCACGGCA TTCACTGCAGTTGCTTCTGCGTCATCCCTTTTCTTCTGCTTATCTCCTTATGTTGCCTATCTGAAGTCACAGTTTGGTTT AGCGGATCCATATGTTTCACGGTGTTGCTCAAAATCTTTCACTCGAACCCAAGGAATGCTGTTGTTAACGTGCTCTTTTA TAGTGGCTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATTTGTTAGGCATATCTATATGCATTGCATTTGTAAGC CATGTGCGTCTTCCGAACATCAAGATTTGTGCAATGCTCCTTCTTTGTCTATTCGTGTATGACATTTTCTGGGTTTTCTT CTCCGAAAGATTTTTTGGGGCAAATGTCATGGTAACAGTGGCAACGCAGCAAGCATCAAATCCTGTGCACACAGTTGCTA ATAGTTTAAGTCTTCCAGGGTTGCAATTGATAACAAAGAAATTGGAGTTGCCTGTAAAGATTGTTTTTCCAAGAAATTTG TTGGGTGGTGTTGTACCTGGAGAGAGTGCAACAGACTTTATGATGCTTGGTTTAGGTGACATGGTATGCCATTCTTACTC TCTGATATGTGTTACTGTACGATTGCATATCCTTAACTTTTCTCCTTTCATTTGGTCATTTGGTTACTATAACGTGAAGA GAATGTTGTATTGTGTTTACTGTTTGCGATATCATTGGAATTATGGAAGGCTGCCTGTTGCTTGATTAACATTGGCTGTG CCGATATTAATAGCATGTTTGGTTGCACATTTGCAGCACACAAACCACATTTCCAATATTCAAAACGTGATATGTGATTT TTGAAGATGTCAGGAAACACGTTTTCAAAATTTTCCAAAGTGATTCGGGACTGACATATGGCTTTTGCATTCAAGTGGAT GAAATCCAAATATGATCAACTTAATTTCTAATCACATGTAGCGTCAACTTCATTTCTAATCACATGTAGCGAAACCACTT TCACAAAATCAAGTATATTCAAAACTACATTTGTCAAGCGCTATTTATTCACACATTGTGCACTTCTTTGACCGTGTTTT GTTTATTATGTGGTTATGTTCATCTTCATTATTATGATTTTACAAATACCTTTGTGATGAAATATTCTGCCATATTTTAT TCTAAAACAATTAGAAAGAAAAAGAAGAATAGAAGGTTATTCTTCACTCTTTATAACTATTACTGTAACCTTCTCCTCTT CCTCCCTTTGCCCCTTTTTTTTCCAAATTTTCGCTCATCAGTTCTTTTTTTAAAGGTTTGTGATGCTGCAAGATGGTTTG ATTTGGATTGAAATTTAGGTTGTGTGAGTTATGCAATAGTTACGGTGTGCTCCTTGTGTATCATGTGTGGATACACTGTA TTGATTATCAAATATCGTTGGATTTCTCTTTCAACCTAAAGCTAGCCATGATTTCATTTTTATTTGTTGGTCTTTCATAA TTTTTACTAATCTCTTGTAGGCCATCCCAGGCATGCTCCTGGCTTTAGTCTTATGCTTTGATTATCGCAAGAGCAGGGAT ACAGTAAATCTCTTTGAGTTATATTCTTCAAAGGGGCACAAATACATATGGTATGCGCTACCTGGGTATGCCATCGGCCT GGTAACTGCTTTGGCAGCTGGTGTCTTGACCCACTCACCTCAACCTGCACTTCTTTATCTGGTAAATCTTTTTTTCCATT TCTTGTCACCATATCAGGTTCTCAACTGTACTTGTTCTTGACAACACAGTGTCTTGTATTTGGACCTATGTTCTCACTGT CATATTTTATTTATACATTTGGAAACTTTAGTTTGTATGACAGATTAATAAACATAGTCACAGTGATTGCTTAAACTACG TAATATTGACTAGTTTATTTCTCTTTCCAGTTTATATTTACAGTATACCAACTTGAAGAATTTCCATCTATCTATTCAAA ACTGAACTTACTGAGTCCTGCTTGGGTATATGATTCTATTGGTCTAAATAAATCAACTTCCTATTCTTGTTGTATGAGGC CTATAGATTACTTCGTCCATCCATTATCTATTTGAAGTGGTCATTGGCCTAGAAGCTGATTCCTTAGCTTCTCTCCCCTT GCTTTTCTTACTAGTACATATAGTTATGATGTTGATGACCCTTGTGTACAATTCCTGCTCCTCTCATGTCAGTGGGGTTT GTATCCCTTCTAGAGTTCTAGGTGTATTAGCAATAAAATTGTGGGTATGCCATACCCGTATGACTGGTATTTGGCCAATT TGCATTGGAGCAATTAATTGAAATTGTTGAACATTTTTTACTACCAATTTCTGATTCAGTAGGAAGAGATTCTTGGATAA ATATGTTGTATGGTGAGTTTGTTCACTGAGCCATTTGATACTTGCAGTTAGTTTGTCAAAATCGATTTTGTAGAACCCAA ATCAGAAAATGTCACTTTCTATTGGTCCAGTGCATAAACTACACGCTACATTACATTCACATAGCCAATTATTTCTCTAA GTTATTGTTTGGTTGAATTTTAAACCATGCAATACTCAATCCATTGTTGATTGTTCTGAATCCCATGATTGTTAATCTTG CTCTGTTCTTAAGAACATGCTCCGTTTACTCATTCAATTTATGTTCTTATATTGATATTTACACAGGAACCCGTCTCATT TGGTATGCTTGTTTCCCTTGATCAATGCCATGGCATAAACATTAGTATCTTGTTTGATTTATAGCAGGAAATCCCAGGGT TATATACGTACAAATAAAGGGAAAAAACCTATAAGTTGGCCTAAGTTCAAGTTTGTGCATATAATGAATATAGATTTAAT GTTACTCTAATAAATTCTGGTACAGCTAGGTTCCAAAACATAACTGATTTTTTTACCTGTAATAATGTTTCATGTGCTTG GTTTGTGTAGGTGCCTTCTACTTTGGGACCTGTAATTGTGATCTCTTGGATAAAAAAGGAGCTACTTGAGTTGTGGGAAG GAGACATGCCAAATCTCAATGATAAGGATCGCGAAATAGAAGTTTAGTCTATTAACCGGTGGTTAAATACCCGAACAGAA AGTTGTAAATTCATTGAGAATCTTTAACCGTGAGACTCACCATGAAAAGTTACATTAAATATTCATGTCTTTATATCTTG ATGTTTCTATCTAATACAACATTCATAAATTAAGGAAAGAAGTTAACAATTCAGAAAGATTAGGGGA
CDS sequence (LotjaGi5g1v0299500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCCCTTTGGAAACTTTTGTATTTGCTAGAGCCTGCACCTGTCACACTTATCACAACGGCTGTAGCTGTGACGTT TGGGTCTGCGTTTCGAGCTCTAAACTATGGGAAAGAAATGGAGCGCAATCGTGACTTCTCTGAAGCGTCCATTACGTTGG ATAGGTCCCAAGCGTTGATGATCCCGGTGATGAGCTCTGTTAGCTTGCTTTTGATGTTCTACTTGTTCTCATCGGTCTCG CAGCTTCTCACGGCATTCACTGCAGTTGCTTCTGCGTCATCCCTTTTCTTCTGCTTATCTCCTTATGTTGCCTATCTGAA GTCACAGTTTGGTTTAGCGGATCCATATGTTTCACGGTGTTGCTCAAAATCTTTCACTCGAACCCAAGGAATGCTGTTGT TAACGTGCTCTTTTATAGTGGCTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATTTGTTAGGCATATCTATATGC ATTGCATTTGTAAGCCATGTGCGTCTTCCGAACATCAAGATTTGTGCAATGCTCCTTCTTTGTCTATTCGTGTATGACAT TTTCTGGGTTTTCTTCTCCGAAAGATTTTTTGGGGCAAATGTCATGGTAACAGTGGCAACGCAGCAAGCATCAAATCCTG TGCACACAGTTGCTAATAGTTTAAGTCTTCCAGGGTTGCAATTGATAACAAAGAAATTGGAGTTGCCTGTAAAGATTGTT TTTCCAAGAAATTTGTTGGGTGGTGTTGTACCTGGAGAGAGTGCAACAGACTTTATGATGCTTGGTTTAGGTGACATGGC CATCCCAGGCATGCTCCTGGCTTTAGTCTTATGCTTTGATTATCGCAAGAGCAGGGATACAGTAAATCTCTTTGAGTTAT ATTCTTCAAAGGGGCACAAATACATATGGTATGCGCTACCTGGGTATGCCATCGGCCTGGTAACTGCTTTGGCAGCTGGT GTCTTGACCCACTCACCTCAACCTGCACTTCTTTATCTGGTGCCTTCTACTTTGGGACCTGTAATTGTGATCTCTTGGAT AAAAAAGGAGCTACTTGAGTTGTGGGAAGGAGACATGCCAAATCTCAATGATAAGGATCGCGAAATAGAAGTTTAG
Protein sequence (LotjaGi5g1v0299500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESLWKLLYLLEPAPVTLITTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALMIPVMSSVSLLLMFYLFSSVS QLLTAFTAVASASSLFFCLSPYVAYLKSQFGLADPYVSRCCSKSFTRTQGMLLLTCSFIVAAWLVSGHWILNNLLGISIC IAFVSHVRLPNIKICAMLLLCLFVYDIFWVFFSERFFGANVMVTVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV FPRNLLGGVVPGESATDFMMLGLGDMAIPGMLLALVLCFDYRKSRDTVNLFELYSSKGHKYIWYALPGYAIGLVTALAAG VLTHSPQPALLYLVPSTLGPVIVISWIKKELLELWEGDMPNLNDKDREIEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| PANTHER | 3 | 367 | 365 | 5.7E-115 | ||
| PANTHER | 3 | 367 | 365 | 5.7E-115 | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 16 | 37 | 22 | - | – | |
| Phobius | 38 | 57 | 20 | - | – | |
| SMART | 49 | 348 | 300 | 1.1E-41 | ||
| Pfam | 50 | 358 | 309 | 9.5E-71 | ||
| TMHMM | 58 | 80 | 23 | - | – | |
| Phobius | 58 | 76 | 19 | - | – | |
| Phobius | 77 | 81 | 5 | - | – | |
| Phobius | 82 | 104 | 23 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 105 | 124 | 20 | - | – | |
| Phobius | 125 | 144 | 20 | - | – | |
| TMHMM | 126 | 145 | 20 | - | – | |
| Phobius | 145 | 149 | 5 | - | – | |
| TMHMM | 149 | 167 | 19 | - | – | |
| Phobius | 150 | 167 | 18 | - | – | |
| Phobius | 168 | 173 | 6 | - | – | |
| TMHMM | 174 | 193 | 20 | - | – | |
| Phobius | 174 | 192 | 19 | - | – | |
| Phobius | 193 | 257 | 65 | - | – | |
| Phobius | 258 | 281 | 24 | - | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 282 | 300 | 19 | - | – | |
| TMHMM | 301 | 323 | 23 | - | – | |
| Phobius | 301 | 323 | 23 | - | – | |
| Phobius | 324 | 328 | 5 | - | – | |
| TMHMM | 328 | 347 | 20 | - | – | |
| Phobius | 329 | 347 | 19 | - | – | |
| Phobius | 348 | 371 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0299500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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