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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0303400 |
| Transcript ID | LotjaGi5g1v0303400.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein, putative; TAIR: AT5G07270.1 hypothetical protein; Swiss-Prot: sp|Q4FE45|XB33_ARATH E3 ubiquitin-protein ligase XBAT33; TrEMBL-Plants: tr|I1LDT7|I1LDT7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0303400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62132686..62136585) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAAATTCGTTTGGATGCTCAGCCTCCGGTGAGAGGCTGGTGTCGGCGGCGAGGGACGGCGACTTTGTGGAGGCGAA GATGCTTCTGAACTGCAACCCTTGTCTCGCCAAGTACTCCACCTTTGGTGGCCTCAATTCGCCTCTCCATTTTGCTGCTG CCAAGGGCCACAACGAGGTTGGTTTTTCTCTATTGCCCATTTTCTCTTCTACCTTCGTTTCGCCAAATTTTGTATCTTTT TTCATTTTTGCCATCTGGGTTTCCATTAGATTGTGGCGTTGTTGCTAGAGAATGGAGCTGATGTGAATTCAAGAAATTAT TCTGGACAGGTATGGCTCTCTCTCTCTCTCTCTCTCTCATGTTATGATCATTCGTTTTGAATTGATGAATAAATTGTATG ATATGATTAAAAATGGGTGAGTGAGATGAGATGATTATAGTTGCTGGTCAATTTGCAATACTGGAAGTTTTTTTTTTTGT ATTTGAAATTAGGTGTGTGTTGTCCATTTTGGGTATGATTCTATTCCATGAGGCAAATTGCTGCCTGTTGATTGATGGAT CTGGTGTCAATTTAGTAGATTCCAGCTCAATTGGGTTTCTGGTACATGTGCTGGCTGTACTAATGTGAGAACATGGTTTG CTTTGATACTTGATTTTGCAGACGGCCTTGATGCAAGCTTGTAGATATGGGCACTGGGAAGTTGTACAGACACTTATACT TTACAAATGCAATGTGAGTCCTGTTATTCTTTCAACCATTTCTATCTAAATTGTTTTTCAGTTTCACCAGAACTTTGTAT TTACTATATAGCATGGAGACCATGTGTCATAGGGTTGATTTGAGTCTGAGAAACTACCTACTAAGTGGGAATTCATTACT CTGTTAATGTGCATGTTTTCTTCTGTTCATTGTAAACATTGATATCGAGAATAATAGAGGATATTCTTTAAATGAACAGG TTATGAGAGCAGATTACCTCAGTGGGAGGACAGCTCTTCACTTTGCAGCTGTGAATGGGCATGTAAGATGTATTAGACTT GTTGTGGCTGACTTTGTTCCAAGTGCTCCTTATGAAGCTCTACATGCAGATTCTAACAAGGGTGCTGGATCAAATGTGGG AGGCAAACATGAACATAGGTACCCCTTTCCTTTTCATTATGCATTTCACAAAGCAACATACAATTGCAGACTTGCAGTGA ATTTCATGTGTTATATTCGTTTGGCTAATGGGGTTATGTCACTGGTATACTTTTTCTGTCTGTCGTATGCTTGTAATTAA AAATTATTTTCATTGATTTCATCATCAGTATAGTATTTAATTTGTTGCTCACTTTAGTTTTTCTAATGTGTCTTACATGT GCAATTTTATACTAAGGCACTTCCTACATGAATAAATATTTGGTAAAATTATTAGTTGCAAAAACTTTGCATAGTTTTGT TGAGAGAATGATGGTTGACATTGAGATTTCATTTGCTGTTATTTTTTATGGAGTATGTTTCACAGCCTGACTTAACTAGA GTTTCTATTCTTTTATGTTATATTATTGTAATTTATTTACTTTATTCCAGTGCAGTGCCCTGTCCAAGTTCGTAAATAAA GCAGCTGACGGTGGTATCACTGCCCTTCATATGGCTGCGTTAAATGGATACTTGGATTGTGTACAGCTGCTGCTTGATCT TAATGCAAATTTGTCTGCTGTGACATATCATTATGGAACATCAATGGATTTAATAGGTATGTCTTTTGCAATTTTGTGTA ATATGCTAAATATCCCTGAAGGTTGATTTCCCCTTCGACATGACTAAAGTAATTTAATGTAGGGGCTGGAAGCACTCCAT TGCATTATGCTGCTTGTGGGGGCAATTTAAAATGCTGTCAGGCAAGAATTTCTTTAGTTTTGATGTATGATAGTCCTTTG TGAATCTTTCCTTTGAATCTGACAATATTTGTATTCTTTTTCAGATCCTCCTTTCAAGAGGTGCAAGTCGGATGGCTTTG AATTGCAATGGGTAAGATATTGTTAATGTGTATTTTAGTGCAACATATCACATGCTTTATAACATGAGATAAATTTGAAT TCCCCCCCTAGGTGGCTTCCTCTTGATATTGCAAGGATGTGGGGTCGTCATTGGCTTGAACCACTACTTGCACCCAGTTC TGATGCCACAGTACCTGCATTCCCTCATTCAAGTTACTTGTCCTTGCCTCTCATGAGTGTGCTCAACATAGCCAGGTATT TTGCCATTCACTGTCTGTTTCTGCATGTCAACCCAACCTTTTTCCATGTGAAAAATCTATGTAAAAAAATGGTAGAATTT CCTCTGTAGCTACCAGTGGCCGTGGGAAATATTTTTGAAAAAGAATGTTTGAGGGGCTTTATAATGTAAACGATAAAAGT ACTTGAGTTAAACAAGCTATGAAAAGTAAAAGAATAGCTGATTCATGAATGCTGAATGGTAAGCCAATTGAAATGGGGGT AATTATTAGAAAATGAACTCTACATTGGAAATCTGTTTTCCTTTTTTTTGGTTTGTCAGTTTCGTGAGTGAACCTAGAAG TAAGGGAGAAGAACACGGACTAATGGCTGACTGGCTTTCCATTGGTCAATAGGTATCTTTTGAAAATAACAAGACATATA GCTATAGGCTGTTGTAGTTGGCATTTGATGCACCGTCTGTGTATGTTATCTTTTTTATTAATGATATAAGAATATTGAAA GTGAAATGAAAAGTTGATTTCCTTGTTTATGGAATGTGTGCAGTTCACTTTTTTTTTGTAAAATACTAAAATTTTCTACA ACTAAATCCATATTGCTGTCGGGCTACTTGTTGACTTAAGATGTTAGCTCAGGTATATTTTCTAGTAAAATGTTAAGATC ACATACATATGTTGAAAATGGGACTAAGATTGATTTGAAATAAATGCAGAGAATGTGGCTTGCAGTCATCTACAGCCTCC TCTGATGAGATTGATTTTTGTGCGGTATGCCTGGAGAGGCCGTGTTCAGTGGCTGCAGAAGGTACAAGATTCTTTATCTT TTGAATATTGTGTGTTTGCCACCTTGCTTGCTTCTGCAAGCGAATATTTAATAAACTGCAGTAGTTAAATATAGGAACCC ATATCCTAACTATTAGTAATTCTGTCAGGACTACTTTCCATAGTCCAAAAAATACAGTCAAAACTAAAATATGTTATTCT AAGAGATCAATAAGTTGCCATCCCATTGCATGTGACCTCCGGAGGGAGGTGGTTTGGGTTATTGTCCTTTGTGAATATGC TTTCTGCCACCTGTCTTTGACGCATTAGAATTTGAAGACCTTATTTAACATTGCAAAACATTTTAAGTGATATCATTAAG TTTTTATATGCAGGATGCAGGCATGAGCTTTGTGTGAGATGTGCACTTTATCTTTGTTCAACAAACAATGTTTCTTCTGA AACACTTTGCACTCCGGGCTCTATCCCTTGCCCCCTTTGTAGACATGGAATTGTCTCTTTTGTTAAGTTACCAGGTTCCC AAACAAAAGAAAATAAATTAAACATGTCTCTTGGCCTGTGTACCCCTTGCATCCTTCATCAGCCATCTCTTTCTCATACA CCTGAGATTCAAAGAAACTGTGTAGATTCTGTTCCTTCAGAGATGCTTTGCCCCGTCACTTGTAGTCCATTTCCATCCAT GGCAATTCCTCTATGCACCTGCAATGATGGTTCATGTCCATCGTTTGAGCCCCGAGAAGCAGAAACACAAGATGGATCAC CTCGTCATTCCCAAGCATCAACAACGGATCAAGATAAAATTGAAGGGCCGAGACTCGATAAAACAACCTGCTCAAGCATG TTTTGGGGTAGAAGGAGTTGCAGCAGGGAACACCAATGCAATTCAGAAATAAATGCTTGA
CDS sequence (LotjaGi5g1v0303400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAATTCGTTTGGATGCTCAGCCTCCGGTGAGAGGCTGGTGTCGGCGGCGAGGGACGGCGACTTTGTGGAGGCGAA GATGCTTCTGAACTGCAACCCTTGTCTCGCCAAGTACTCCACCTTTGGTGGCCTCAATTCGCCTCTCCATTTTGCTGCTG CCAAGGGCCACAACGAGATTGTGGCGTTGTTGCTAGAGAATGGAGCTGATGTGAATTCAAGAAATTATTCTGGACAGACG GCCTTGATGCAAGCTTGTAGATATGGGCACTGGGAAGTTGTACAGACACTTATACTTTACAAATGCAATTGCAGTGCCCT GTCCAAGTTCGTAAATAAAGCAGCTGACGGTGGTATCACTGCCCTTCATATGGCTGCGTTAAATGGATACTTGGATTGTG TACAGCTGCTGCTTGATCTTAATGCAAATTTGTCTGCTGTGACATATCATTATGGAACATCAATGGATTTAATAGGGGCT GGAAGCACTCCATTGCATTATGCTGCTTGTGGGGGCAATTTAAAATGCTGTCAGATCCTCCTTTCAAGAGGTGCAAGTCG GATGGCTTTGAATTGCAATGGGTGGCTTCCTCTTGATATTGCAAGGATGTGGGGTCGTCATTGGCTTGAACCACTACTTG CACCCAGTTCTGATGCCACAGTACCTGCATTCCCTCATTCAAGTTACTTGTCCTTGCCTCTCATGAGTGTGCTCAACATA GCCAGAGAATGTGGCTTGCAGTCATCTACAGCCTCCTCTGATGAGATTGATTTTTGTGCGGTATGCCTGGAGAGGCCGTG TTCAGTGGCTGCAGAAGGATGCAGGCATGAGCTTTGTGTGAGATGTGCACTTTATCTTTGTTCAACAAACAATGTTTCTT CTGAAACACTTTGCACTCCGGGCTCTATCCCTTGCCCCCTTTGTAGACATGGAATTGTCTCTTTTGTTAAGTTACCAGGT TCCCAAACAAAAGAAAATAAATTAAACATGTCTCTTGGCCTGTGTACCCCTTGCATCCTTCATCAGCCATCTCTTTCTCA TACACCTGAGATTCAAAGAAACTGTGTAGATTCTGTTCCTTCAGAGATGCTTTGCCCCGTCACTTGTAGTCCATTTCCAT CCATGGCAATTCCTCTATGCACCTGCAATGATGGTTCATGTCCATCGTTTGAGCCCCGAGAAGCAGAAACACAAGATGGA TCACCTCGTCATTCCCAAGCATCAACAACGGATCAAGATAAAATTGAAGGGCCGAGACTCGATAAAACAACCTGCTCAAG CATGTTTTGGGGTAGAAGGAGTTGCAGCAGGGAACACCAATGCAATTCAGAAATAAATGCTTGA
Protein sequence (LotjaGi5g1v0303400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNSFGCSASGERLVSAARDGDFVEAKMLLNCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYSGQT ALMQACRYGHWEVVQTLILYKCNCSALSKFVNKAADGGITALHMAALNGYLDCVQLLLDLNANLSAVTYHYGTSMDLIGA GSTPLHYAACGGNLKCCQILLSRGASRMALNCNGWLPLDIARMWGRHWLEPLLAPSSDATVPAFPHSSYLSLPLMSVLNI ARECGLQSSTASSDEIDFCAVCLERPCSVAAEGCRHELCVRCALYLCSTNNVSSETLCTPGSIPCPLCRHGIVSFVKLPG SQTKENKLNMSLGLCTPCILHQPSLSHTPEIQRNCVDSVPSEMLCPVTCSPFPSMAIPLCTCNDGSCPSFEPREAETQDG SPRHSQASTTDQDKIEGPRLDKTTCSSMFWGRRSCSREHQCNSEINA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 104 | 104 | 5.3E-261 | – | |
| PANTHER | 1 | 104 | 104 | 5.3E-261 | – | |
| Gene3D | 4 | 112 | 109 | 4.8E-24 | ||
| SUPERFAMILY | 15 | 213 | 199 | 5.15E-44 | ||
| SMART | 44 | 73 | 30 | 1.8E-5 | ||
| ProSiteProfiles | 44 | 201 | 158 | 38.09 | ||
| ProSiteProfiles | 44 | 76 | 33 | 14.532 | ||
| Pfam | 46 | 98 | 53 | 1.3E-13 | – | |
| SMART | 77 | 106 | 30 | 0.023 | ||
| PANTHER | 105 | 447 | 343 | 5.3E-261 | – | |
| PANTHER | 105 | 447 | 343 | 5.3E-261 | – | |
| Gene3D | 113 | 218 | 106 | 3.6E-23 | ||
| ProSiteProfiles | 117 | 149 | 33 | 11.861 | ||
| SMART | 117 | 146 | 30 | 1.3E-5 | ||
| Pfam | 118 | 148 | 31 | 1.8E-5 | ||
| Pfam | 160 | 207 | 48 | 3.6E-7 | ||
| ProSiteProfiles | 160 | 192 | 33 | 11.114 | ||
| SMART | 160 | 189 | 30 | 2.2E-4 | ||
| SUPERFAMILY | 253 | 315 | 63 | 6.56E-7 | – | |
| ProSiteProfiles | 259 | 309 | 51 | 9.258 | ||
| ProSitePatterns | 274 | 283 | 10 | - | ||
| MobiDBLite | 393 | 421 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0303400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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