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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0310600 |
| Transcript ID | LotjaGi5g1v0310600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; TAIR: AT5G43850.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|D7T737|MTND1_VITVI 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1; TrEMBL-Plants: tr|I3SR18|I3SR18_LOTJA 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Found in the gene: LotjaGi5g1v0310600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62858045..62860366) extracted from Lotus japonicus Gifu genome v1.2.
GTAATTTCTAGAAGCAAAGTGTAAGATAAAACGACAATGATGATATTTTCCATAGCAGAAAACACCAACCACAGGAAGGG AAGAGATGGTAATAAACTAATAATACAAAATATACTCCACAATAATATTATTTAATTTCTTAATTAATTAATTAATTAAT TATTTTTTGGTCTCGTACTTCATATATATAAATTATCATCACCACTTTCGCATATAGAATAAGCGACAAGGTTCATTGAA ACTTGAAGTTGGTCACTCATGGCGATTGAGGTGAGTTCTTCTTCTCTATGTACCAATGAATTAATATCAATCTAAGGCTT CATTTTCATTATTATTGATTAAAAAATGTGACAGGCATGGTTCATGGACGATAGCAATGAAGATCCAAGGCTTCCACACC ATTGCAAACCCCAGCAATTTGCTTCCTTGGACCAATTAGCAGAATTGGGAGTCTTATACTGGAAGCTGAATCCAACTGAC TATGAAAACGATCAAGAGTTGAAGAAGATTAGGGAAGACAGGGGATACAATTACATGGTAATCTTGTGTTTAATTTTTAT TACATTCAACTAATTAAACTAAAGAACCATGCTTGTGATCTAAATTGTTTATAGATAGCCTTCAAAGTTTTACTGTTTCA TTCTATCATAAGGTTTGGAGGGAATCATGGAATACACTCATTAGACTTGATTTTATAGAGGAGCATGATATGCAATTTTG TATGAACAGTGTATGATTCCTAGGATAGGCTGCACAGAACTAAGCAGCTACACTGAAACTCTGAGACTGACACCATTTCT CAGTACTCATAGCATGTTTGGATTTCTATTAGTCCAAAACAGAGTTTGGCCAAAAGTTTGTCTTAGCTTGAATCCAAATC ATAGTTTTGGGATTTCAGATTGGATTCCAAACACATCTTAGTAGCATAGTTGTTAGACCAAAATATTACTTGCCTGTTTA GAGATTTAGCAATTTGAGGTTAATTTATGAGCTTCTGAACTTTTGTTCTTCTTAGATTTTTCCCTTACCAACTGGCCATC CTTCAAATTTGCTATTGTGTGCTGACCATTTGTTTCGAATGTTCTGATTGTTGATAGCATTTATTTGCGTTTTTCAATAT ATCTCTGTTTATTTGAATATATGTTGTAGGATCTGCTTGATTTATGCCCAGAGAAAGTGGAAAATTATGAAGAGAAGTTG AAGAACTTCTACACTGAGCACATCCATCAGGATGAAGAGATTCGTTATTGCTTGGAAGGAAGTGGCTACTTCGATGTGCG AGACAAAGCTGATCGATGGATTCGCATTTGGATCAAGGCCGGTGATCTCATCATTTTACCTGCTGGAATCTACCATCGGT TCACTCTTGACACAAGTAATTATGTGAAGGTTTGGAACTATCTTATTCTAACCACAATCATTAAGACTCTAGATTATGGC TTCATTCTTAGGATGAGAAGGAAGAAATTTCAGTTTGAAGTGTGTTTCAATAGATAAAGATTCAAAGCTTTTATGGTTTG ATTAATCATTAGTTGTTTTATTTCTGTGCATGATGTGTGCAGTTGATGAGGTTGTTTATCGGCGAGCCTGTATGGACAGC ATATAATCGACCACAGGAAGATAACCCTGCTAGAAAGGAATACATGAAGGGCTTGATTGAGAAAAATAGATTTCCTCTTG CAGCTCATTAGGGTCCTTTAATATACAAGTGTATCTTGTTTTAGATATTATAACATAAGCATATTACCAAGTAAAAGGTC TGTCTATGAACCTAAAACAGACCAAGCATGAGATGAGACTCAAATAAGTTTAAGAACACTTAGTGTCTGTTTACTCAGTA CAAATTTTTGTCTATGTGAAGCTGTTGTTATGTTCTGTGTAATCACTTGTTTAAATCAAGTTTGTCCATTCAGAAAAATA ATGGCATATATACAAAGAGAAGGCAAACTTGTTTTGATAGAACCGCCAACTATAGCTGGAAAGCCCTTTACATGTTCTTA CAGCTTTCCTTTGTGTAAAGGTTGTAAAGGTAGTTTGGGTAATGTTAGTTCCCAGAAGTTTTAAACTCAATTTTTTTGGT CCATATTCAAATCTTGGATGAATGCAAACGTTAGATGCATGTTGTCCTAGATGGCATTCCTTGGGAATTTTTATTATGAG TTCCAACAAGGACCTTTTGGAATGAAAGAAATCAGTGTGAAAAGAAAAAATAATGTAATATGAAGAAAAGTGAGTGAAAA TGGAATCTATGAAAAAATGAGGTTGAGTGAATGAAAATCCTAATTATGTGGATAGTTCATTTAGCAAGATGGTATGCGTG TT
CDS sequence (LotjaGi5g1v0310600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATTGAGGCATGGTTCATGGACGATAGCAATGAAGATCCAAGGCTTCCACACCATTGCAAACCCCAGCAATTTGC TTCCTTGGACCAATTAGCAGAATTGGGAGTCTTATACTGGAAGCTGAATCCAACTGACTATGAAAACGATCAAGAGTTGA AGAAGATTAGGGAAGACAGGGGATACAATTACATGGATCTGCTTGATTTATGCCCAGAGAAAGTGGAAAATTATGAAGAG AAGTTGAAGAACTTCTACACTGAGCACATCCATCAGGATGAAGAGATTCGTTATTGCTTGGAAGGAAGTGGCTACTTCGA TGTGCGAGACAAAGCTGATCGATGGATTCGCATTTGGATCAAGGCCGGTGATCTCATCATTTTACCTGCTGGAATCTACC ATCGGTTCACTCTTGACACAAGTAATTATGTGAAGTTGATGAGGTTGTTTATCGGCGAGCCTGTATGGACAGCATATAAT CGACCACAGGAAGATAACCCTGCTAGAAAGGAATACATGAAGGGCTTGATTGAGAAAAATAGATTTCCTCTTGCAGCTCA TTAG
Protein sequence (LotjaGi5g1v0310600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIEAWFMDDSNEDPRLPHHCKPQQFASLDQLAELGVLYWKLNPTDYENDQELKKIREDRGYNYMDLLDLCPEKVENYEE KLKNFYTEHIHQDEEIRYCLEGSGYFDVRDKADRWIRIWIKAGDLIILPAGIYHRFTLDTSNYVKLMRLFIGEPVWTAYN RPQEDNPARKEYMKGLIEKNRFPLAAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 187 | 187 | 9.3E-106 | – | |
| PANTHER | 1 | 187 | 187 | 9.3E-106 | ||
| Gene3D | 1 | 179 | 179 | 5.6E-89 | ||
| Hamap | 3 | 171 | 169 | 37.836 | ||
| SUPERFAMILY | 4 | 174 | 171 | 1.78E-54 | ||
| Pfam | 5 | 158 | 154 | 5.2E-61 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acireductone dioxygenase [iron(II)-requiring] activity | Catalysis of the reaction: 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + O(2) = 4-methylthio-2-oxobutanoate + formate + H(+). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | L-methionine salvage from methylthioadenosine | The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0310600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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