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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0312000 |
| Transcript ID | LotjaGi5g1v0312000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 7S globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|P13918|VCLC_PEA Vicilin; TrEMBL-Plants: tr|B5U8K8|B5U8K8_LOTJA Convicilin storage protein 2; Found in the gene: LotjaGi5g1v0312000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63005508..63008610) extracted from Lotus japonicus Gifu genome v1.2.
CTGTTCTTTGTCTTGATCTTGACAGTGGAACACACACATTAACTTAACATTAACACTCTCGATCAGCACAAAAAGCCAAA CCAATCGTGACAGAGGAAGACAAACATTACGTACCCAGCTGAAGACAATGTCCAAGTTCATCAAATTCAAACAAAACACA ACCGCGCCGGTTCGCTTCATTTATCCACCATAGCAGATGCAGCCCGCCGCGTCCATCGGAACTGGACCCCAAACTCCATG CACAACAACACGTATGCAATTGAGCTGTCCACATGCATGCCACTCTGTGGCCAAATGTCGCTGCATCTTCATCAGAACAG AGGAGCTTTCACTTCTATAACTATAAATACCCCTGTTCTCCCCTGAGTTTCATCATCATCGACAAAGAGTGAGTTCAATC TTATCCAACTCATCATGGCTAGTACTGAAATGAAAGCAAGGTTTCCTCTGTTACTTTTGCTGGGAATTCTCTTCCTAGCT TCAGTTTCTGTCTGTTACGGCATTGTCTCCCATGACAAGGAAGACGATGATCGACGACCATGGTGGCCTGAACCTGAAAG AGAGGAGGAAAAGCATCATCAAAGGACCAGGGGAAGTGAGGAAGGTGAAAAAGAAGAACGTGAACGACATCAGGAGCCAG GACATCGAGAAAGGGCACGCCAGGAGGGTGAGAAGGAGGAAGATGAACGACAACCATGGTGGCAACCTGGACGTGGAGAA GAAGAAGGAGAGTGGAGAGGCTCTCGCCGTCTTGAAGATCCTGATGAGAGGGAGAGAGTGAGGGAAAGAACAGAGCGAGC AAAGAAATGGAGGCGAGAGACAGAGGAGAGGGACACACCTCGTCGACCACACCACCGTGAGAGTGAAGAAGAGGAAGGTT CTTCTTCTTCTTCTTCTTCAGAGTCCTCACGGAGGAGTCAACGAAGGAACCCCTTCTACTTCAGGTCTAGTTCTAGCAGG TTCCAGACTCGCTTCCAGAATGAATACGGTTACGTTCGTGTCCTCCAAAGGTTCGATGAGCGATCAAAGCTGTTTGAGAA TCTCCAAAACTATCGAATTTTTGAGTTTAAGGCCAAACCCCATACCGTTGTTCTGCCTCACCACAATGATGCTGATTCCA TCGTTGTCATCCTCAGTGGTAATTAATTATTAATCAATTAAGTTAAGAATTAGCACCACAATTAGTTAATTTCATTGAAT GACTCATAATTATGATTTTGTTTGATTGCAGGGAAAGCCATAATTACCTTAGTGAATCCTAATGACAGAGAGTCCTTCAA CCTTGAGAGGGGTGATGTCCTGGTACACCCTGCAGGAACCATAGCTTATGTAGCTAACCATGATGATAATGAGAATCTCA GAATCGCTAAAATCATTATTCCTGTTAATAGACCTGGCGAATTTCAGGTAACACTAGCTTCATTTTCTTTTTCTGCTTTT TCCAATTTCATGCAACACAACACTAGTAAGTTTAAAATTTTTGTGGTTCACTACAGGCTTTCTACCCCTCTAACACTGAA CCTCAAGAATCCTACCTGAATGGATTCAGCAGGAATATACTAGAGGCTTCCTTCAATGTAAGTTTCCATATATGTCTTTA TCTAATTAACTACATCACTTTCTTTTAATTATATGATTGTAAATTTTTATGGTTGGTTATGCATATCATAGGCTGAATAC AATGAGATAGAGAGGGTTCTGTTACGAGGAGGAGAACAGAGGCAGGAACAGGGTTTGATAGTGAAAGTGTCACGGGATCT GATTCAACAACTAAGCAGACATGCAAAATCCAGCTCAAGAAAGAGAACTTCTTCTGAACCTGAGCCATTCAACTTGAGAA GCCGTGATCCAATCTATTCCAACGAGTTTGGCAAGCACTTTGAGATCAATCCAAACAGAAATTCGCAGCTCAGAGACTTT GACATCTTTCTCAGCTCAACTGAGATCAGGGAGGTAAATTAGTAATTACTGATTAAACTTGACATTGAGGTTACTTCTAT GACCAATTCACCTGCTTAGTTCTTAATATATTGATCCAATTTTTCTTTTTTGTTTTGTTTTAGGGATCTATTTTCCTGCC ACACTACAATTCAAGGTCCACAGTGATTCTTGTGGTGAATGAAGGAAGAGGAGAGTTTGAACTTGTGGCTCAAAGGAAGC AACAACAGCAGAGGAGAAATGAAGAAGATGAAGAAGAGGAAGAGGAACAACCTCGCATTGAGGCTCAGAGGTTCAGAGCA AGGTTGTCTCCTGGTGATGTTGTGGTGATCCCAGCAGGTCATCCAGTTGCAATAAACGCTTCCTCAGATCTCAATTTCAT TGCCTTTGGTATCAATGCTGAGAACAACCAGAGGCACTTCCTTGCAGGTTAGTTTCCATGACTAGCTGACATACCATAAT ACATAAATTGGATATACTATATGTTACTGTGCTTTATAACATGTGAAACATGAATTCTAATTGCTTTTGTTTGGTTAATC AAATGGGGAAAAATTAATCTAATTGGGTTATTTTGTTGGTGATTAAAAATTGAAAGGTGGTGATGACAATGTGATAAGCC AGATAGAGAAGGTAGTGAAAGAGATTGCATTCCCTGGGTCTGCTGAAGATATTGAAAGGCTGATAAAGAATCAGAGGAAC TCCCACTTTGCAAATGCTCAGCCTCAGCAAAGGGAGGAGGGAGGACATGGAAGAAGAGGCCCATTATCTTCAATTTTGGG CGCTTTTACCAAGTGAACTGATCTATGTGCATGTAAGAGTGTAAGGGCTCATAGTGACCCAAAAATGATGTAGCTGCTCA TGTAACTACAACTAGAGCTCCGCCTTTGTGCTACAAATAAATAAATTAATTAAGAATAATAGTTGTGTCTTAAACTACAT GTTTAGTAAGCTAATTTGTAGAAACTATTTCTCTTTCCGCCATGACACCACGTATCTCACCTATCTTTTTCTGCCAAGCC TTCCCACTATATGTTGGCGGTTATATCCATTTGTGATAGATTGACGGTTAAAACTGTGTTTGGTTTTTAATTTGGAAGTG TGTTTGAGATATTGAAATTTAAGATCACACATTTTAATACTTTAAACGTGAAAGAGATTTCGG
CDS sequence (LotjaGi5g1v0312000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGTACTGAAATGAAAGCAAGGTTTCCTCTGTTACTTTTGCTGGGAATTCTCTTCCTAGCTTCAGTTTCTGTCTG TTACGGCATTGTCTCCCATGACAAGGAAGACGATGATCGACGACCATGGTGGCCTGAACCTGAAAGAGAGGAGGAAAAGC ATCATCAAAGGACCAGGGGAAGTGAGGAAGGTGAAAAAGAAGAACGTGAACGACATCAGGAGCCAGGACATCGAGAAAGG GCACGCCAGGAGGGTGAGAAGGAGGAAGATGAACGACAACCATGGTGGCAACCTGGACGTGGAGAAGAAGAAGGAGAGTG GAGAGGCTCTCGCCGTCTTGAAGATCCTGATGAGAGGGAGAGAGTGAGGGAAAGAACAGAGCGAGCAAAGAAATGGAGGC GAGAGACAGAGGAGAGGGACACACCTCGTCGACCACACCACCGTGAGAGTGAAGAAGAGGAAGGTTCTTCTTCTTCTTCT TCTTCAGAGTCCTCACGGAGGAGTCAACGAAGGAACCCCTTCTACTTCAGGTCTAGTTCTAGCAGGTTCCAGACTCGCTT CCAGAATGAATACGGTTACGTTCGTGTCCTCCAAAGGTTCGATGAGCGATCAAAGCTGTTTGAGAATCTCCAAAACTATC GAATTTTTGAGTTTAAGGCCAAACCCCATACCGTTGTTCTGCCTCACCACAATGATGCTGATTCCATCGTTGTCATCCTC AGTGGGAAAGCCATAATTACCTTAGTGAATCCTAATGACAGAGAGTCCTTCAACCTTGAGAGGGGTGATGTCCTGGTACA CCCTGCAGGAACCATAGCTTATGTAGCTAACCATGATGATAATGAGAATCTCAGAATCGCTAAAATCATTATTCCTGTTA ATAGACCTGGCGAATTTCAGGCTTTCTACCCCTCTAACACTGAACCTCAAGAATCCTACCTGAATGGATTCAGCAGGAAT ATACTAGAGGCTTCCTTCAATGCTGAATACAATGAGATAGAGAGGGTTCTGTTACGAGGAGGAGAACAGAGGCAGGAACA GGGTTTGATAGTGAAAGTGTCACGGGATCTGATTCAACAACTAAGCAGACATGCAAAATCCAGCTCAAGAAAGAGAACTT CTTCTGAACCTGAGCCATTCAACTTGAGAAGCCGTGATCCAATCTATTCCAACGAGTTTGGCAAGCACTTTGAGATCAAT CCAAACAGAAATTCGCAGCTCAGAGACTTTGACATCTTTCTCAGCTCAACTGAGATCAGGGAGGGATCTATTTTCCTGCC ACACTACAATTCAAGGTCCACAGTGATTCTTGTGGTGAATGAAGGAAGAGGAGAGTTTGAACTTGTGGCTCAAAGGAAGC AACAACAGCAGAGGAGAAATGAAGAAGATGAAGAAGAGGAAGAGGAACAACCTCGCATTGAGGCTCAGAGGTTCAGAGCA AGGTTGTCTCCTGGTGATGTTGTGGTGATCCCAGCAGGTCATCCAGTTGCAATAAACGCTTCCTCAGATCTCAATTTCAT TGCCTTTGGTATCAATGCTGAGAACAACCAGAGGCACTTCCTTGCAGGTGGTGATGACAATGTGATAAGCCAGATAGAGA AGGTAGTGAAAGAGATTGCATTCCCTGGGTCTGCTGAAGATATTGAAAGGCTGATAAAGAATCAGAGGAACTCCCACTTT GCAAATGCTCAGCCTCAGCAAAGGGAGGAGGGAGGACATGGAAGAAGAGGCCCATTATCTTCAATTTTGGGCGCTTTTAC CAAGTGA
Protein sequence (LotjaGi5g1v0312000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTEMKARFPLLLLLGILFLASVSVCYGIVSHDKEDDDRRPWWPEPEREEEKHHQRTRGSEEGEKEERERHQEPGHRER ARQEGEKEEDERQPWWQPGRGEEEGEWRGSRRLEDPDERERVRERTERAKKWRRETEERDTPRRPHHRESEEEEGSSSSS SSESSRRSQRRNPFYFRSSSSRFQTRFQNEYGYVRVLQRFDERSKLFENLQNYRIFEFKAKPHTVVLPHHNDADSIVVIL SGKAIITLVNPNDRESFNLERGDVLVHPAGTIAYVANHDDNENLRIAKIIIPVNRPGEFQAFYPSNTEPQESYLNGFSRN ILEASFNAEYNEIERVLLRGGEQRQEQGLIVKVSRDLIQQLSRHAKSSSRKRTSSEPEPFNLRSRDPIYSNEFGKHFEIN PNRNSQLRDFDIFLSSTEIREGSIFLPHYNSRSTVILVVNEGRGEFELVAQRKQQQQRRNEEDEEEEEEQPRIEAQRFRA RLSPGDVVVIPAGHPVAINASSDLNFIAFGINAENNQRHFLAGGDDNVISQIEKVVKEIAFPGSAEDIERLIKNQRNSHF ANAQPQQREEGGHGRRGPLSSILGAFTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| PANTHER | 6 | 583 | 578 | 8.6E-183 | – | |
| PANTHER | 6 | 583 | 578 | 8.6E-183 | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| Phobius | 22 | 29 | 8 | - | – | |
| Phobius | 30 | 588 | 559 | - | – | |
| MobiDBLite | 35 | 155 | 121 | - | – | |
| MobiDBLite | 35 | 173 | 139 | - | – | |
| MobiDBLite | 157 | 173 | 17 | - | – | |
| Gene3D | 166 | 368 | 203 | 1.6E-80 | ||
| SUPERFAMILY | 179 | 378 | 200 | 5.94E-47 | ||
| SMART | 181 | 334 | 154 | 3.5E-9 | ||
| Pfam | 187 | 332 | 146 | 2.5E-10 | ||
| SUPERFAMILY | 345 | 560 | 216 | 1.29E-45 | ||
| MobiDBLite | 362 | 386 | 25 | - | – | |
| Gene3D | 369 | 563 | 195 | 2.7E-60 | ||
| SMART | 380 | 549 | 170 | 6.8E-44 | ||
| Pfam | 380 | 538 | 159 | 1.6E-25 | ||
| Coils | 446 | 470 | 25 | - | – | |
| MobiDBLite | 450 | 473 | 24 | - | – | |
| MobiDBLite | 559 | 588 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi5g1v0312000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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