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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0312100 |
| Transcript ID | LotjaGi5g1v0312100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 7S globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|P11827|GLCAP_SOYBN Beta-conglycinin, alpha' chain; TrEMBL-Plants: tr|B5U8K3|B5U8K3_LOTJA Convicilin storage protein 1; Found in the gene: LotjaGi5g1v0312100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63014134..63017149) extracted from Lotus japonicus Gifu genome v1.2.
GGATGTAAAGCAAAAGATTAAAAGAAATCAAATCTCAGAAGAAGACCCCTATAAGAGAAGGCATACCATTAATCCTATAA AGTTAGTGCTGCAGAGATTTTATAAACTTTGTCTATTCAAAACAATCACCTACTCAAACTGTTAGATAGGTAAAATAAAC TCCCTACCCTAAGCCAACCCAAAAATTCACACCACATTATTTTTCCTCTGCCACCTCAATTCTGTTCATTTCAACACCCG TCAACCTGCATGGCACCCCGTGTCCAAATGTTAGTGCATGTTCTGATGTTCATCAGATCAAATGCTTTCAATTCTATAGC TATAAATACCCTTCATCTCCCCTCAGTGTTCATCATCGAGAGCAAGTGAGTTCAATCTTATCCAACTCATAATGGCGAGT GCTAAAATCAAAGCGCGGCTTCCTCTGTTGCTGTTGCTGGGAATTCTTTTCCTGGTTTCTGTCTCCCTTGCCACTGCTTC CCGGCAACGGGAGGACCCCTGCCGTGAGCAAGGTGAAGATGAACGACAGCCATGGCAACCTCGCCGTGAGAGAGAGGAAC ATGGCCGTGAGAGAGAGGAGGAAGATGAAAAAGAGTCGAGGCGACCATCATGGGAAAGAAAAGAGCGAACAAGAGAGTGG AGGCGAGAGAGTGAGGAGAGGGACACACCTCGTCGACCACACCGTCAGAGTGAAGAAGAGGAGAGTGACAGACCCCGTCG ACCACACAGGGAGAGCAAGGAGAGGCCTCGTCGACACCAGCGTGAAAGTGAAGAAGAGGAAGGTTCATCTTCTTCTTCGG AGTCCTCACGGAGGAGCCAACGGAGGAACCCCTTCCACTTCAGGTCTAGCAGGTTCCAGACTCACTTTGAGAATGAACAC GGTCACGTTCGTGTCCTCCAGAGGTTCGATGAGCGCTCTAAGCTGTTTGAGAATCTCCAAAACTATCGAATCTTGGAGTT TAAGGCCAAACCTCAAACCCTTGTTCTGCCCCACCACAATGATGCTGATTCCATCATTGTCATCCTAAGTGGTAATTATC TACCAATCAATTAACTACTGCTAATATATAATTAAGCATAAGCAGTTAAGCACCACCTTAACTTCATTAATTTCTTTGAA TGATTAACAATTTAATGGTGCAATTTATTAATATTATTTTGATTGCAGGGAGAGCCATACTTACCATAGTGAACCCCAAC GACAGAGACTCCTACAACCTTGAGAGTGGCGACGCACTGGTAATCCCTGCAGGAGCCACTGCTTATTTGGCTAATCGTGA TAATGATGAGAATCTCAGAGTGGTCAAACTCCTTATACCCATTAATAGACCTGGCCAATATCAGGTAACAATTGTTTACT TTGCTTTTTCTCATCTAATCTCAGTCATTAATGCCTTTTCCAATTTGTTTCATTTTTCCCAGCTATAGTTAGCTAACTCT TAATTTGTGTCCTTCCCTACAGCCTTTCTTCCCCTCAAGTAGTGAAACTCAAGAATCCTACCTCAATGGGTTCAGCAGAA ATATTCTAGAGGCTTCCTTCAATGTAAGCTTCCATACATGCATGTAATAATTAACTGTACATCATTTATTTACTTATATG ATTATAACTTTTTATGGTTGGTTACCTATATCATAGGCTGGATATGACGAGATTGAGAGGGTTCTCTTGCAAAGAGAAGA GCAGAGAGGCGAACAGAGCCAGGAACAGGGTGTGATAGTGAAAGCGTCACAGGATCAAATTCAACAACTGAGCAGGCATG CCAAATCGAGCTCAAGAAAGAGAAGCTCTTCTAAATCTGAGCCGTTCAACTTGAGAAGCAGCAAGCCAATCTCTTCCAAC AAGTTTGGTAAGCTCTTTGAGATCACTCCAGAGAAAAATCAGCAGCTCCGAGACTTGGACATCTTGCTCAGCGAAGCTCA GATCAAAGAGGTAAGCAAACTACTAGTTAAACTCGACAGTGAAGTGATCCACTTCTATAATCTATTCGCTTACTTATAAG TTCTTAAAACACTAATCCTATTTCATTTTGTTTCAAAATGTAGGGATCAATTTTCCTGCCACACTACCATTCAACCTCCA CACTGATACTGGTGGTTAATGAAGGAAGAGGAGAGCTTGAACTTGTGGCTCAGAGGAGGCAGCAGCAGAGAGGACAAGAA GAAGAGCAGGAAGAGGAACAACCACGTATTGAGGCTCAGAGGTTCAGAGCAAGGTTGTCTCCTGGTGATGTTATAGTGAT CCCAGCAAGTCATCCATTTGCAGTAACCGCTTCCTCGGATCTCAATTTGCTTGCCTTTGGTATCAATGCTGAGAACAACC AGAGGAACTTCCTTGCAGGTTGATTTCTATGACTGACTCACCATCTTACATAAATTGAATACACTATATGTTGCTTTCCT TTATGATGACATGTGAACATCATTTATAATTTCTTCTGCTTAATCAAATTGAAACAAAAATAAACTAATTGGGTTACTTT GTTGGTGATTAAAAATTGGAAGGCCGTGATGACAATGTGATAAGCCAGATAGAGAGGCCAGTGAAAGAGCTTGCATTCCC TGGATCTGCTGAAGAAATTGAGAGTCTGATAAAGAATCAGAGGAACTCCTGCTTTGCAAGTGCTCAGCCTCAGCAAGGGG AGGAGGAAGGACGTAGTGGAAAAAAAGACCAGCTGTCTTCAATTTTGGGTGCTTTTTTCTAAGTAACTCTATGTGCCTGT CATGTATGTAATGTATGCTGTAAGAGCTCATGGTGAGCCAAAAATAAAGTAGTAGGCTCTTCTAACTAAAACTAAAGCTC CACCTATGTACTAAGAATAAATAAAATCGAGAATAAAAAGTTGTTTGTTTCCTTAATCTATGTTTAGCCTTTGTTTCACT TATGCACATTTTTTAGGGTTAACTAAGATTTTGGTCCCTACAAAACGAGTGGAGTGAGGGCGCTGGCAAGTTCCTTCCTA GAAGAAAAAATATATCGCGTTCCTTCATACACAAAGTTGTTAGTGTCTAACACGTG
CDS sequence (LotjaGi5g1v0312100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGTGCTAAAATCAAAGCGCGGCTTCCTCTGTTGCTGTTGCTGGGAATTCTTTTCCTGGTTTCTGTCTCCCTTGC CACTGCTTCCCGGCAACGGGAGGACCCCTGCCGTGAGCAAGGTGAAGATGAACGACAGCCATGGCAACCTCGCCGTGAGA GAGAGGAACATGGCCGTGAGAGAGAGGAGGAAGATGAAAAAGAGTCGAGGCGACCATCATGGGAAAGAAAAGAGCGAACA AGAGAGTGGAGGCGAGAGAGTGAGGAGAGGGACACACCTCGTCGACCACACCGTCAGAGTGAAGAAGAGGAGAGTGACAG ACCCCGTCGACCACACAGGGAGAGCAAGGAGAGGCCTCGTCGACACCAGCGTGAAAGTGAAGAAGAGGAAGGTTCATCTT CTTCTTCGGAGTCCTCACGGAGGAGCCAACGGAGGAACCCCTTCCACTTCAGGTCTAGCAGGTTCCAGACTCACTTTGAG AATGAACACGGTCACGTTCGTGTCCTCCAGAGGTTCGATGAGCGCTCTAAGCTGTTTGAGAATCTCCAAAACTATCGAAT CTTGGAGTTTAAGGCCAAACCTCAAACCCTTGTTCTGCCCCACCACAATGATGCTGATTCCATCATTGTCATCCTAAGTG GGAGAGCCATACTTACCATAGTGAACCCCAACGACAGAGACTCCTACAACCTTGAGAGTGGCGACGCACTGGTAATCCCT GCAGGAGCCACTGCTTATTTGGCTAATCGTGATAATGATGAGAATCTCAGAGTGGTCAAACTCCTTATACCCATTAATAG ACCTGGCCAATATCAGCCTTTCTTCCCCTCAAGTAGTGAAACTCAAGAATCCTACCTCAATGGGTTCAGCAGAAATATTC TAGAGGCTTCCTTCAATGCTGGATATGACGAGATTGAGAGGGTTCTCTTGCAAAGAGAAGAGCAGAGAGGCGAACAGAGC CAGGAACAGGGTGTGATAGTGAAAGCGTCACAGGATCAAATTCAACAACTGAGCAGGCATGCCAAATCGAGCTCAAGAAA GAGAAGCTCTTCTAAATCTGAGCCGTTCAACTTGAGAAGCAGCAAGCCAATCTCTTCCAACAAGTTTGGTAAGCTCTTTG AGATCACTCCAGAGAAAAATCAGCAGCTCCGAGACTTGGACATCTTGCTCAGCGAAGCTCAGATCAAAGAGGGATCAATT TTCCTGCCACACTACCATTCAACCTCCACACTGATACTGGTGGTTAATGAAGGAAGAGGAGAGCTTGAACTTGTGGCTCA GAGGAGGCAGCAGCAGAGAGGACAAGAAGAAGAGCAGGAAGAGGAACAACCACGTATTGAGGCTCAGAGGTTCAGAGCAA GGTTGTCTCCTGGTGATGTTATAGTGATCCCAGCAAGTCATCCATTTGCAGTAACCGCTTCCTCGGATCTCAATTTGCTT GCCTTTGGTATCAATGCTGAGAACAACCAGAGGAACTTCCTTGCAGGCCGTGATGACAATGTGATAAGCCAGATAGAGAG GCCAGTGAAAGAGCTTGCATTCCCTGGATCTGCTGAAGAAATTGAGAGTCTGATAAAGAATCAGAGGAACTCCTGCTTTG CAAGTGCTCAGCCTCAGCAAGGGGAGGAGGAAGGACGTAGTGGAAAAAAAGACCAGCTGTCTTCAATTTTGGGTGCTTTT TTCTAA
Protein sequence (LotjaGi5g1v0312100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASAKIKARLPLLLLLGILFLVSVSLATASRQREDPCREQGEDERQPWQPRREREEHGREREEEDEKESRRPSWERKERT REWRRESEERDTPRRPHRQSEEEESDRPRRPHRESKERPRRHQRESEEEEGSSSSSESSRRSQRRNPFHFRSSRFQTHFE NEHGHVRVLQRFDERSKLFENLQNYRILEFKAKPQTLVLPHHNDADSIIVILSGRAILTIVNPNDRDSYNLESGDALVIP AGATAYLANRDNDENLRVVKLLIPINRPGQYQPFFPSSSETQESYLNGFSRNILEASFNAGYDEIERVLLQREEQRGEQS QEQGVIVKASQDQIQQLSRHAKSSSRKRSSSKSEPFNLRSSKPISSNKFGKLFEITPEKNQQLRDLDILLSEAQIKEGSI FLPHYHSTSTLILVVNEGRGELELVAQRRQQQRGQEEEQEEEQPRIEAQRFRARLSPGDVIVIPASHPFAVTASSDLNLL AFGINAENNQRNFLAGRDDNVISQIERPVKELAFPGSAEEIESLIKNQRNSCFASAQPQQGEEEGRSGKKDQLSSILGAF F
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| PANTHER | 6 | 557 | 552 | 8.2E-186 | – | |
| PANTHER | 6 | 557 | 552 | 8.2E-186 | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| TMHMM | 12 | 29 | 18 | - | – | |
| Phobius | 22 | 29 | 8 | - | – | |
| MobiDBLite | 30 | 147 | 118 | - | – | |
| Phobius | 30 | 561 | 532 | - | – | |
| MobiDBLite | 32 | 135 | 104 | - | – | |
| Gene3D | 140 | 344 | 205 | 5.7E-88 | ||
| SUPERFAMILY | 146 | 354 | 209 | 6.11E-49 | ||
| SMART | 148 | 306 | 159 | 2.9E-16 | ||
| Pfam | 159 | 261 | 103 | 1.1E-8 | ||
| SUPERFAMILY | 321 | 532 | 212 | 2.14E-46 | ||
| MobiDBLite | 337 | 363 | 27 | - | – | |
| Gene3D | 345 | 535 | 191 | 9.9E-62 | ||
| Pfam | 356 | 514 | 159 | 1.5E-22 | ||
| SMART | 356 | 522 | 167 | 2.3E-48 | ||
| Coils | 422 | 442 | 21 | - | – | |
| MobiDBLite | 426 | 446 | 21 | - | – | |
| MobiDBLite | 532 | 561 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi5g1v0312100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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