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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0312700 |
| Transcript ID | LotjaGi5g1v0312700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Folate/biopterin transporter; TAIR: AT2G32040.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SKZ5|FBT1_ARATH Folate-biopterin transporter 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0ELM0|A0A0R0ELM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0312700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63074832..63082053) extracted from Lotus japonicus Gifu genome v1.2.
TTCAATATATATTTAAAAGATGAACATATAAATGTGTATGCAAATATGCTAAGTTTTTATTGTATGAAGGATTAGCTTAC AGATTAAATTGGCACCTTTGCTTGTTTTATCCAATATGTAGTATGCAACTTCTAAAAAAAGGTAAATTATTGGTTGCTGA ATTGTTGGATTTTTATGGCAGGTGCAGGAAAAGGGGATATGGTAACAACTGAGACAGAGATAGAGGTTTCCTCTGCTAGT AAAATTGAGAAGAGGAAAGGCAGATATGGTATGGGTAGCATGACGTTGTTTGGGGTAGAGTTATCCCCAGATACTGTTGC TATTGCCATGGTATATTTTGTTCAAGGAGTTTTAGGACTTGCAAGGCTAGCTGTCAACTTTTATTTAAAAGATGATTTGC ATCTCGACCCTGCTGAGGTATGTCTTCTTAGTTAGTTATTCGGCTCATGGTTTCATTAGTATGTAATTCACTCATGTTTT GATTATTTTTGTTTGAATTTTATTAGTTGTGCCCGTTTACCTAATCCAAGGTGTGATCAGTTAAATGTTAGCCTTTGCTT CTGTGTGCTAAAATAATAGGGATTCACCGATTCAGTTAATGGAGAAAGAAGTGAGACGAAAGAGACTATGAAATATGGAT ATTATTCTCTTGTATATAATGATGTGAGGATAACATGTGATGTGTTAACTCTAGTAGTCCTTATCAATCAAATCTAGAAA CAAACCAGGAAATATAATGAGATATGGAAACTGCTTTTAAGAGATCACACAAGATACTTTGAGATATTCTAAGGTACAAT AGTAATGTTATGAATGATTTCTTAGATATTCTTACTGGGTCAAATGTAGAAACCAAAAAGTGATGGTGTTTCCTTGAGAT TCTGTTTTTTTTTTCTTTATGGAATCAATTATACATTAGCTTTTGAAGGACTGACTTGTGACATATATTGACTAGGCAGC TGTGATTACTGGTTTATCTGCATTACCTTGGCTTGTCAAACCACTTTACGGGTTTATTAGGTGAGTCTAAACTGCATCAA TTTTCCCTCTTCCTTTAGTGGTAACTTAATTATTTTGCCATCATTTGTCTCTCACATGGACTAATGCTTTCATTGCTTTG TTATTGAAACTATAACTGTGGCATGCAGTGATTCTATCCCCCTTTTTGGTTATCGGAGAAGGTCATACCTAGTTTTATCA GGGCTACTTGGTGCACTTTCCTGGAGTTTGATGTGTACTCTTGTTGACAGCAAATATAGTGCTGCTATTTGCATACTTCT CGGATCTCTTTCTGTTGCCTTCTCAGATGTAGTGAGTGTCTCCTGCTTTGTAATTCACACTGTTTTTTTCTAATCTGGAA TCATTTAATTATGGATAATGTTTGTCAATTCCATGTGCTGATAATGAATGAGATTTTTAAGGATATTATTGAGCGCTTCA CCAAAAAAAAATCTTACATGGTAAAAATGGAGATGATGGAATTTAATATTTTCAGAATATCAACTTATTCATTTAAATTT ATGTTATCAACAAATTTGTTATCGGTCTATCATTCTTTTTATTGTGAATTGACATATTGAAGTACCTTTGTGGCTTTTAA TTCTTCCTCATTGTGCTTCAAGCTTTGACGCACTTACCTTTCATACAATTTCATCTGTCTTGCTCCTAGAAGCCTATGAT ATTATGACTTTAGTGTTTTATCATCTTCTATAAGTTGAACGTTTTGAGAACTATGTCAGACACTAAGCTGTCTTTTAGGT TGTAGATTCGATGGTTGTGGAGAGGGCGCGTGGTGAGTCACAAAGCACTTCAGGTTCTCTGCAATCTTTATGTTGGGGTT CTTCAGCTTTTGGTGGAATTGTGAGCTCCTACTTCAGTGGGTCTTTGCTGGATAAATATGGAGTAAGGTACTGAAAGAAG TTTGTGAATCAAGATACTTTTGATTACTGATGGCAGTTTTTTTTTTTTTCTAATAAATGTGCACTGTTCCAGGTTTGTTT TTGGTGTCACAGCATTGCTTCCACTAATAACTTCCGCAGTTGCTGTTCTTGTTAAAGAACAACCTATGCTTGGTACAACA AGAGGGCAAAACCTTCCTTTTGCCAGGCCTGAGTTTTTGGAAAGTTCAAAACAAAGCATTATTGAGCTGTGGGGTGCTGT ACGACAGCCCGGTGTTTTTCTCCCCACTCTGTTTATTTTCTTGTGGCAAGCAACTCCGCAATCTGACTCTGCTATGTTCT ACTTTACGTACGTCCATTATGTGAATAGACCATTATTTACTGTGTGTTATGAGCTTCATGTCATGTTGTTCTCTAATCAG TGCATATCCTTACTTCAACTTTAAATAATCCTTATCCCTTTCAGCACAAATTCTCTTGGTTTCACTCCTGAGTTTTTAGG ACGTGTCAAGCTTGTTACCTCCATTGCATCTCTGCTTGGTGTTGGACTTTATAATGGATTTCTGAAGAGTGTTCCTTTAC GGAAAATATTTCTTGCAACTACCCTTTTAGGTTCAGCTCTTGGTATGACTCAGGTTAGTTGTATGTTTCATAGCTTGTTT AGATATTTTCAATCTGAACAGAGTTTTCTAAACATCTTTCTAATGTTTTTAACCTCTTGTCAGGTTTTCCTGGTTACTGG ACTAAATCGGAAATTGGGCATAAGTGATGAGTGGTTTGCAGTTGGTGATTCACTAATTCTCACAGTCTTGAGTCAGGTTA TCATTATCTTCTTTTATTCATTAGTCATATTACAAATACTGCTCTTTGGGAAACACACTTCCTCTATCTAGTATAGTTGT TATTGATAAGGTTTCTGGTGTTTGACAATAAATAAATAGAGTGGGCGCTAAGGTCCACATTGACTAGAGATATGCTCGTA ATAATCCTTATAAATGGTAGAGCAATCTTTACCCCTGAGCTTACTTTTGGGGTAGAGTTTAGCATAACCCAAATTTTAAG TTGATATTAGAGTTTATCCTAAATTTTTTTATTGTGCCACCCATAAATGAGTGGCGTGAAGATGTGTTGAGGTCTCACAT TGACTACAGGTCTGCCAGAAATAGTCCTTATACTTGAATTTGATAAAATATATCTATATTTCATTGATAATACTTGACTT GACTACAATATATATAGACTAACAAAGAGATAAAGAGAAACTAAATCTATCTAATCCTATCTCTATTTAAATAGATATCA TCTCTATTTAAATAGATACTAATCTAAAATACATAAACAAATCTTAACTATATCTCTATGAGATAAGACTAATAATAAAC TAAATCTTAATAGATATTCAACACTCCCTCTCAAGCTAAAGCTTACTTAGCTTTAAGCTTGTAACAAATCGAACCCAAGA AGAAAATTATCTTAATAGATATCCCTTATTAATGACGGGCTTGGCAAATCTCTGAATTGAATAACCTTTCAAACTTTTAG TAAATCCATGGCGGCAAGAGACAACTTCTCATACTTGAAATTGAATAATCTTTCGAACTTCTGCTAAATCCATGGGCACG ATAAAGACAACTTCTCATACTTGATATGGCTGAAATTGATGCAAGACAAAAACCAATTCTTCTGGAGTGTCGTAGGGTAG CTGAGCCAGCAAACAAGGGCGAAAAACCAGCAACAATACGCCCGAAAACAAAACAAAGCTGAAGCAACAACTCACCAACA ACAACCAAACAGAAATAAAACATACTTGAAGTCAATCGATTGATGGCTTATAAGACAAACAATGGTGTCAACTTTGACAC AGACAACTCTCAAACATTAGAGAGTGGGCCAACGCAACTCGCAGCTGAAGCCCTAAAACCAGAAAACCAAACAGGGTCAG CGCAACCTGCAGCTGAAGCCCTAAAACCAGAAAACCAAACAATCGAGACAAAACAAACGAAGGTGACACTGTCACCTCCA AAACCAAACCAAACCAAATTGCATAAAGTCAGCCAAGATCATTGTAATAAGAGCATCTCGAACCATGAGACGCAAACTAA GATCTCAAACAGCGAGAAACATCGCAGATGAGTAAACACAGCAGACTCACGAACCAAACTAGAAGAGTTGGACCGGACGA TCACCACGGTGGCGGCACAACACCTCAAAACAGAGCCAAACAATAAAATCCTTTACACCGGAGATCTAAACAATGCAACC CTTCACCAAACAAACGAATTACCATTGCCAATTGCCAAGGAGAAGAATTTCAATTCTTGCAATCACATGCAACATTCAAA GACTATCAATAGTGTAGCAGCGCAATACAATTAGATCCAACCAAACACTTCTTCAATACAACCTCCACCAAACCAGCAAC AAAGGGTAACGATTGTCGAAGGTGTTGATTGTGGTCTTTATTAGGATATTTAGCAATATCCAACACTTCCCCTCAAGCTA GAGCATATATGTCATATGCATAGCTTGTAACAAATATAATTAAGATATTTCCAGATCTTCCCCTCAAGCTAGAGCATATA TGTCATATGCATAGCTTGCAACAAATATAATTAACTTGCGGAGAAAAGCTACTGCTGCCAAACACAATGTTAGTGAATCT GCGAAATCTGAAATTGCTCAAACTGTTGCATCAAGGAAATCTCAACCTTGTCATGAACCAGAATTGTAATGATGTTGGTC GAACACTTCATCACTGTGAACACATTAATTTATGAAAAACTGATTTTGATCGCCACAAATGTAATGATCTTTTTGTGATT TCTATACTGAAAATTCAGTATATGAATTGGCAAAGAAGGAAATTGACGAAGAAATCATAGGAGAATCACAAGATGAAGGG CATTAGTAGTGTTCTTTTCCATCAAAACTTCAATACCACTGCTGTTGATGAAATAGAAAGGAAAGCTCCAACAAAAACCT CTTCTGAAGCTTTACCACCACATAACGATAAAGTAAGTTCACACATGCACATAAATAGAAAAATCTGAAGTAGGCATCCA AGAACAACAAACAATACTCTGGATCTGGGCAAAAGGACCCCTGAAACAGCACCAGGAGGGGTAGACGACCTTGTCTGTGC AATTGCGACGGCGAAAGGATGCTTGGAGGGTGGCGCGAGTGTAACTCACTCGCTGAGAAGAAGACGGCGCGTGGAAGGAC ATTGATAGTGGCTGAACATTACTAGGGTTCCAAGACAAAGGGGACCATAATCAGAAAGAAACGAGGCCGTAAGAAAACGG CTAGAACTAACAAGCGGAAGCAAAGTACGAAAAATAAATCCAGAAAGATTTGGAAAGTCACCATGAGGGGGCTCACGGGG GAGGAGCCCCCTCACAGCGGTAGGATCGAAACTTGCGCTCTGATACCAACTTGAATTTGATAAAATATATCTATATTTCA TTGATAATACTTGACTGGACTACAATATATATAGACTAACAAAGAGATAAAGAGAAACTAAATCTATCTAATCCTATCTC TATTTAAATAGATATCATCTCTATTTAAATAGATACTAATCTAAAATACATAAACAAATCTTAACTATATCTCTATGAGA TAAGACTAATAATAAACTAAATCTTAATAGATATTCAACACTTATAAAAGGTATAATAAAACAACCCTCACGCCTGAGCC AGTTTTTGGGGTAAAGTTAGGCCTAACCTAAATTCTAAGAGAGGTTTCACACATTTAATTTGTCTTACTCTGTTTGAACT AAAAATTCATTGATGTTTCTGCCATCACAGTTAAAATCTAATATTTTCTTACTTCAAATCTAAAATCAACCTAACCTATA CTTTCATAGTATGATTCATGAACTTAATCCTTCTATAATTTGAACATGCTTGTATTCCAGCTTTGTTCTTATAGCAAGGA TTAAAGTACTTCTCCTGACATTTGGCCTGACCTTAGACTTCATAATCTCGTCAAACATCTTTTTGAGTCATCTTAAGTCC TCTCTCTTGGACCCTTCCATAACTTAATATGTATATTATCCAGTCCAACTGGTTTGCCATTAGCCATCCTCTTGAATGTT TCTTTTAGCGTATTAAATTTCAATAGTAACATGTGTACTTCAACAAATAGCTTGTGGAAGTAACTCTACCACCTTTCCTT CATATCCTATATTAATTGTCCTGTCATTCTTTCTTTATCTTTAGCGAGCTTACAAATATTTCATTTCCCAGCTTTGGTTT CTAAGAGTTGGCGTAACCTTTCAAATGCTCTAACTCTTATTTGGCTCACCACCTTCTTTGTATTTTTTGTGGCAGCTTTA TATGTATCTCAATTTTCACCATATTTACATGTGGACCATGCTTTTTAGTATTTCATTGTAACCTTAATCATGCATTGTGC TTGCATCTCACTTCCATGAATCTTTAGTCTTTACCCCTCTAAAAGCCGCCAAAAGGGCCTTGCAAGAAGCATTAGGTCAC CAGAGTTCTTTTAAAAGAAGCTTTTGAGGGATTTACCAGACCCTTAAAATTTATATATTTGTAATAAATTGAAGCTTCAA TTGGACATTTGTAGTTGTAATGTCTGAAAAGAAACCACACATAAATGGGGACCTTCCTTTGCAGACTGCTTATTTGTGAT ACATGATTTCCATGGTTTTTTAGGGCTAATCATGCTAAAATGTAGTTGCTTTTTTCTTCCTTTTTGACATTAAAAAAGAG GGAATCCTCAACCAGCTTTTTGAGGATTCACGCCTTCCTTATGCAAAAGTAAATTTAAAGGGGGAATATATTTCTGATTA TAGTTTGGAAATGGTAAGGCAATATTGATCTTTTTTATGATTTAGGAGAGATAATTAGTTCCAGTGTATGCCGTGATATA GGCAATATCATCATTCACCTCATGAATAACCTTTTTCTTGGGCTTCGATCCTACCATTCAGCTATTATATATTTTGTTTG TACACAATATTTTTCCTGCATCTAATTAGTTGTTCTTTTCAGGCTTCTTTCATGCCTGTTCTCGTTCTAGCAGCAAGATT ATGTCCCGAGGGAATGGAGGCAACTCTTTTCGCAACTCTCATGTCCGTATCTAATGGAGGGAGTGTCCTTGGGGGATTGA TAGGTGCAGGCTTGACACAAGTATTTGGAATTACCAAGGACAGATTTGATAACTTGGCAGCTCTGATAATCCTTTGCAAT CTTAGCTCATTATTGCCTCTGCCTCTTCTTGGTCTTCTCCCTGAGGACAATCCTGATGTGAATCCTAAGGAAAATTCTGA TGTTGAGATGAAGTCTAACTGA
CDS sequence (LotjaGi5g1v0312700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAACAACTGAGACAGAGATAGAGGTTTCCTCTGCTAGTAAAATTGAGAAGAGGAAAGGCAGATATGGTATGGGTAG CATGACGTTGTTTGGGGTAGAGTTATCCCCAGATACTGTTGCTATTGCCATGGTATATTTTGTTCAAGGAGTTTTAGGAC TTGCAAGGCTAGCTGTCAACTTTTATTTAAAAGATGATTTGCATCTCGACCCTGCTGAGGCAGCTGTGATTACTGGTTTA TCTGCATTACCTTGGCTTGTCAAACCACTTTACGGGTTTATTAGTGATTCTATCCCCCTTTTTGGTTATCGGAGAAGGTC ATACCTAGTTTTATCAGGGCTACTTGGTGCACTTTCCTGGAGTTTGATGTGTACTCTTGTTGACAGCAAATATAGTGCTG CTATTTGCATACTTCTCGGATCTCTTTCTGTTGCCTTCTCAGATGTAGTTGTAGATTCGATGGTTGTGGAGAGGGCGCGT GGTGAGTCACAAAGCACTTCAGGTTCTCTGCAATCTTTATGTTGGGGTTCTTCAGCTTTTGGTGGAATTGTGAGCTCCTA CTTCAGTGGGTCTTTGCTGGATAAATATGGAGTAAGGTTTGTTTTTGGTGTCACAGCATTGCTTCCACTAATAACTTCCG CAGTTGCTGTTCTTGTTAAAGAACAACCTATGCTTGGTACAACAAGAGGGCAAAACCTTCCTTTTGCCAGGCCTGAGTTT TTGGAAAGTTCAAAACAAAGCATTATTGAGCTGTGGGGTGCTGTACGACAGCCCGGTGTTTTTCTCCCCACTCTGTTTAT TTTCTTGTGGCAAGCAACTCCGCAATCTGACTCTGCTATGTTCTACTTTACCACAAATTCTCTTGGTTTCACTCCTGAGT TTTTAGGACGTGTCAAGCTTGTTACCTCCATTGCATCTCTGCTTGGTGTTGGACTTTATAATGGATTTCTGAAGAGTGTT CCTTTACGGAAAATATTTCTTGCAACTACCCTTTTAGGTTCAGCTCTTGGTATGACTCAGGTTTTCCTGGTTACTGGACT AAATCGGAAATTGGGCATAAGTGATGAGTGGTTTGCAGTTGGTGATTCACTAATTCTCACAGTCTTGAGTCAGGCTTCTT TCATGCCTGTTCTCGTTCTAGCAGCAAGATTATGTCCCGAGGGAATGGAGGCAACTCTTTTCGCAACTCTCATGTCCGTA TCTAATGGAGGGAGTGTCCTTGGGGGATTGATAGGTGCAGGCTTGACACAAGTATTTGGAATTACCAAGGACAGATTTGA TAACTTGGCAGCTCTGATAATCCTTTGCAATCTTAGCTCATTATTGCCTCTGCCTCTTCTTGGTCTTCTCCCTGAGGACA ATCCTGATGTGAATCCTAAGGAAAATTCTGATGTTGAGATGAAGTCTAACTGA
Protein sequence (LotjaGi5g1v0312700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVTTETEIEVSSASKIEKRKGRYGMGSMTLFGVELSPDTVAIAMVYFVQGVLGLARLAVNFYLKDDLHLDPAEAAVITGL SALPWLVKPLYGFISDSIPLFGYRRRSYLVLSGLLGALSWSLMCTLVDSKYSAAICILLGSLSVAFSDVVVDSMVVERAR GESQSTSGSLQSLCWGSSAFGGIVSSYFSGSLLDKYGVRFVFGVTALLPLITSAVAVLVKEQPMLGTTRGQNLPFARPEF LESSKQSIIELWGAVRQPGVFLPTLFIFLWQATPQSDSAMFYFTTNSLGFTPEFLGRVKLVTSIASLLGVGLYNGFLKSV PLRKIFLATTLLGSALGMTQVFLVTGLNRKLGISDEWFAVGDSLILTVLSQASFMPVLVLAARLCPEGMEATLFATLMSV SNGGSVLGGLIGAGLTQVFGITKDRFDNLAALIILCNLSSLLPLPLLGLLPEDNPDVNPKENSDVEMKSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | - | – | |
| PANTHER | 27 | 460 | 434 | 6.0E-259 | – | |
| PANTHER | 27 | 460 | 434 | 6.0E-259 | ||
| TIGRFAM | 27 | 470 | 444 | 1.2E-152 | ||
| TMHMM | 30 | 52 | 23 | - | – | |
| Gene3D | 38 | 444 | 407 | 9.5E-24 | – | |
| Phobius | 40 | 63 | 24 | - | – | |
| CDD | 40 | 437 | 398 | 2.1605E-169 | – | |
| SUPERFAMILY | 43 | 442 | 400 | 1.57E-32 | ||
| Pfam | 49 | 461 | 413 | 3.6E-114 | ||
| Phobius | 64 | 74 | 11 | - | – | |
| TMHMM | 72 | 94 | 23 | - | – | |
| Phobius | 75 | 94 | 20 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| Phobius | 106 | 123 | 18 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| Phobius | 124 | 128 | 5 | - | – | |
| Phobius | 129 | 151 | 23 | - | – | |
| Phobius | 152 | 171 | 20 | - | – | |
| Phobius | 172 | 190 | 19 | - | – | |
| Phobius | 191 | 195 | 5 | - | – | |
| Phobius | 196 | 219 | 24 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 220 | 253 | 34 | - | – | |
| TMHMM | 252 | 274 | 23 | - | – | |
| Phobius | 254 | 274 | 21 | - | – | |
| Phobius | 275 | 293 | 19 | - | – | |
| Phobius | 294 | 313 | 20 | - | – | |
| TMHMM | 294 | 316 | 23 | - | – | |
| Phobius | 314 | 324 | 11 | - | – | |
| TMHMM | 325 | 347 | 23 | - | – | |
| Phobius | 325 | 345 | 21 | - | – | |
| Phobius | 346 | 356 | 11 | - | – | |
| TMHMM | 357 | 379 | 23 | - | – | |
| Phobius | 357 | 381 | 25 | - | – | |
| Phobius | 382 | 392 | 11 | - | – | |
| TMHMM | 391 | 413 | 23 | - | – | |
| Phobius | 393 | 417 | 25 | - | – | |
| Phobius | 418 | 428 | 11 | - | – | |
| TMHMM | 428 | 450 | 23 | - | – | |
| Phobius | 429 | 450 | 22 | - | – | |
| Phobius | 451 | 470 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0312700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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