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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0312700 |
| Transcript ID | LotjaGi5g1v0312700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Folate/biopterin transporter; TAIR: AT2G32040.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SKZ5|FBT1_ARATH Folate-biopterin transporter 1, chloroplastic; TrEMBL-Plants: tr|N1NKH4|N1NKH4_ARAHY Putative transmembrane BT1 family protein; Found in the gene: LotjaGi5g1v0312700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63075159..63082053) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTATATTTTGTTCAAGGAGTTTTAGGACTTGCAAGGCTAGCTGTCAACTTTTATTTAAAAGATGATTTGCATCTCGA CCCTGCTGAGGTATGTCTTCTTAGTTAGTTATTCGGCTCATGGTTTCATTAGTATGTAATTCACTCATGTTTTGATTATT TTTGTTTGAATTTTATTAGTTGTGCCCGTTTACCTAATCCAAGGTGTGATCAGTTAAATGTTAGCCTTTGCTTCTGTGTG CTAAAATAATAGGGATTCACCGATTCAGTTAATGGAGAAAGAAGTGAGACGAAAGAGACTATGAAATATGGATATTATTC TCTTGTATATAATGATGTGAGGATAACATGTGATGTGTTAACTCTAGTAGTCCTTATCAATCAAATCTAGAAACAAACCA GGAAATATAATGAGATATGGAAACTGCTTTTAAGAGATCACACAAGATACTTTGAGATATTCTAAGGTACAATAGTAATG TTATGAATGATTTCTTAGATATTCTTACTGGGTCAAATGTAGAAACCAAAAAGTGATGGTGTTTCCTTGAGATTCTGTTT TTTTTTTCTTTATGGAATCAATTATACATTAGCTTTTGAAGGACTGACTTGTGACATATATTGACTAGGCAGCTGTGATT ACTGGTTTATCTGCATTACCTTGGCTTGTCAAACCACTTTACGGGTTTATTAGGTGAGTCTAAACTGCATCAATTTTCCC TCTTCCTTTAGTGGTAACTTAATTATTTTGCCATCATTTGTCTCTCACATGGACTAATGCTTTCATTGCTTTGTTATTGA AACTATAACTGTGGCATGCAGTGATTCTATCCCCCTTTTTGGTTATCGGAGAAGGTCATACCTAGTTTTATCAGGGCTAC TTGGTGCACTTTCCTGGAGTTTGATGTGTACTCTTGTTGACAGCAAATATAGTGCTGCTATTTGCATACTTCTCGGATCT CTTTCTGTTGCCTTCTCAGATGTAGTGAGTGTCTCCTGCTTTGTAATTCACACTGTTTTTTTCTAATCTGGAATCATTTA ATTATGGATAATGTTTGTCAATTCCATGTGCTGATAATGAATGAGATTTTTAAGGATATTATTGAGCGCTTCACCAAAAA AAAATCTTACATGGTAAAAATGGAGATGATGGAATTTAATATTTTCAGAATATCAACTTATTCATTTAAATTTATGTTAT CAACAAATTTGTTATCGGTCTATCATTCTTTTTATTGTGAATTGACATATTGAAGTACCTTTGTGGCTTTTAATTCTTCC TCATTGTGCTTCAAGCTTTGACGCACTTACCTTTCATACAATTTCATCTGTCTTGCTCCTAGAAGCCTATGATATTATGA CTTTAGTGTTTTATCATCTTCTATAAGTTGAACGTTTTGAGAACTATGTCAGACACTAAGCTGTCTTTTAGGTTGTAGAT TCGATGGTTGTGGAGAGGGCGCGTGGTGAGTCACAAAGCACTTCAGGTTCTCTGCAATCTTTATGTTGGGGTTCTTCAGC TTTTGGTGGAATTGTGAGCTCCTACTTCAGTGGGTCTTTGCTGGATAAATATGGAGTAAGGTACTGAAAGAAGTTTGTGA ATCAAGATACTTTTGATTACTGATGGCAGTTTTTTTTTTTTTCTAATAAATGTGCACTGTTCCAGGTTTGTTTTTGGTGT CACAGCATTGCTTCCACTAATAACTTCCGCAGTTGCTGTTCTTGTTAAAGAACAACCTATGCTTGGTACAACAAGAGGGC AAAACCTTCCTTTTGCCAGGCCTGAGTTTTTGGAAAGTTCAAAACAAAGCATTATTGAGCTGTGGGGTGCTGTACGACAG CCCGGTGTTTTTCTCCCCACTCTGTTTATTTTCTTGTGGCAAGCAACTCCGCAATCTGACTCTGCTATGTTCTACTTTAC GTACGTCCATTATGTGAATAGACCATTATTTACTGTGTGTTATGAGCTTCATGTCATGTTGTTCTCTAATCAGTGCATAT CCTTACTTCAACTTTAAATAATCCTTATCCCTTTCAGCACAAATTCTCTTGGTTTCACTCCTGAGTTTTTAGGACGTGTC AAGCTTGTTACCTCCATTGCATCTCTGCTTGGTGTTGGACTTTATAATGGATTTCTGAAGAGTGTTCCTTTACGGAAAAT ATTTCTTGCAACTACCCTTTTAGGTTCAGCTCTTGGTATGACTCAGGTTAGTTGTATGTTTCATAGCTTGTTTAGATATT TTCAATCTGAACAGAGTTTTCTAAACATCTTTCTAATGTTTTTAACCTCTTGTCAGGTTTTCCTGGTTACTGGACTAAAT CGGAAATTGGGCATAAGTGATGAGTGGTTTGCAGTTGGTGATTCACTAATTCTCACAGTCTTGAGTCAGGTTATCATTAT CTTCTTTTATTCATTAGTCATATTACAAATACTGCTCTTTGGGAAACACACTTCCTCTATCTAGTATAGTTGTTATTGAT AAGGTTTCTGGTGTTTGACAATAAATAAATAGAGTGGGCGCTAAGGTCCACATTGACTAGAGATATGCTCGTAATAATCC TTATAAATGGTAGAGCAATCTTTACCCCTGAGCTTACTTTTGGGGTAGAGTTTAGCATAACCCAAATTTTAAGTTGATAT TAGAGTTTATCCTAAATTTTTTTATTGTGCCACCCATAAATGAGTGGCGTGAAGATGTGTTGAGGTCTCACATTGACTAC AGGTCTGCCAGAAATAGTCCTTATACTTGAATTTGATAAAATATATCTATATTTCATTGATAATACTTGACTTGACTACA ATATATATAGACTAACAAAGAGATAAAGAGAAACTAAATCTATCTAATCCTATCTCTATTTAAATAGATATCATCTCTAT TTAAATAGATACTAATCTAAAATACATAAACAAATCTTAACTATATCTCTATGAGATAAGACTAATAATAAACTAAATCT TAATAGATATTCAACACTCCCTCTCAAGCTAAAGCTTACTTAGCTTTAAGCTTGTAACAAATCGAACCCAAGAAGAAAAT TATCTTAATAGATATCCCTTATTAATGACGGGCTTGGCAAATCTCTGAATTGAATAACCTTTCAAACTTTTAGTAAATCC ATGGCGGCAAGAGACAACTTCTCATACTTGAAATTGAATAATCTTTCGAACTTCTGCTAAATCCATGGGCACGATAAAGA CAACTTCTCATACTTGATATGGCTGAAATTGATGCAAGACAAAAACCAATTCTTCTGGAGTGTCGTAGGGTAGCTGAGCC AGCAAACAAGGGCGAAAAACCAGCAACAATACGCCCGAAAACAAAACAAAGCTGAAGCAACAACTCACCAACAACAACCA AACAGAAATAAAACATACTTGAAGTCAATCGATTGATGGCTTATAAGACAAACAATGGTGTCAACTTTGACACAGACAAC TCTCAAACATTAGAGAGTGGGCCAACGCAACTCGCAGCTGAAGCCCTAAAACCAGAAAACCAAACAGGGTCAGCGCAACC TGCAGCTGAAGCCCTAAAACCAGAAAACCAAACAATCGAGACAAAACAAACGAAGGTGACACTGTCACCTCCAAAACCAA ACCAAACCAAATTGCATAAAGTCAGCCAAGATCATTGTAATAAGAGCATCTCGAACCATGAGACGCAAACTAAGATCTCA AACAGCGAGAAACATCGCAGATGAGTAAACACAGCAGACTCACGAACCAAACTAGAAGAGTTGGACCGGACGATCACCAC GGTGGCGGCACAACACCTCAAAACAGAGCCAAACAATAAAATCCTTTACACCGGAGATCTAAACAATGCAACCCTTCACC AAACAAACGAATTACCATTGCCAATTGCCAAGGAGAAGAATTTCAATTCTTGCAATCACATGCAACATTCAAAGACTATC AATAGTGTAGCAGCGCAATACAATTAGATCCAACCAAACACTTCTTCAATACAACCTCCACCAAACCAGCAACAAAGGGT AACGATTGTCGAAGGTGTTGATTGTGGTCTTTATTAGGATATTTAGCAATATCCAACACTTCCCCTCAAGCTAGAGCATA TATGTCATATGCATAGCTTGTAACAAATATAATTAAGATATTTCCAGATCTTCCCCTCAAGCTAGAGCATATATGTCATA TGCATAGCTTGCAACAAATATAATTAACTTGCGGAGAAAAGCTACTGCTGCCAAACACAATGTTAGTGAATCTGCGAAAT CTGAAATTGCTCAAACTGTTGCATCAAGGAAATCTCAACCTTGTCATGAACCAGAATTGTAATGATGTTGGTCGAACACT TCATCACTGTGAACACATTAATTTATGAAAAACTGATTTTGATCGCCACAAATGTAATGATCTTTTTGTGATTTCTATAC TGAAAATTCAGTATATGAATTGGCAAAGAAGGAAATTGACGAAGAAATCATAGGAGAATCACAAGATGAAGGGCATTAGT AGTGTTCTTTTCCATCAAAACTTCAATACCACTGCTGTTGATGAAATAGAAAGGAAAGCTCCAACAAAAACCTCTTCTGA AGCTTTACCACCACATAACGATAAAGTAAGTTCACACATGCACATAAATAGAAAAATCTGAAGTAGGCATCCAAGAACAA CAAACAATACTCTGGATCTGGGCAAAAGGACCCCTGAAACAGCACCAGGAGGGGTAGACGACCTTGTCTGTGCAATTGCG ACGGCGAAAGGATGCTTGGAGGGTGGCGCGAGTGTAACTCACTCGCTGAGAAGAAGACGGCGCGTGGAAGGACATTGATA GTGGCTGAACATTACTAGGGTTCCAAGACAAAGGGGACCATAATCAGAAAGAAACGAGGCCGTAAGAAAACGGCTAGAAC TAACAAGCGGAAGCAAAGTACGAAAAATAAATCCAGAAAGATTTGGAAAGTCACCATGAGGGGGCTCACGGGGGAGGAGC CCCCTCACAGCGGTAGGATCGAAACTTGCGCTCTGATACCAACTTGAATTTGATAAAATATATCTATATTTCATTGATAA TACTTGACTGGACTACAATATATATAGACTAACAAAGAGATAAAGAGAAACTAAATCTATCTAATCCTATCTCTATTTAA ATAGATATCATCTCTATTTAAATAGATACTAATCTAAAATACATAAACAAATCTTAACTATATCTCTATGAGATAAGACT AATAATAAACTAAATCTTAATAGATATTCAACACTTATAAAAGGTATAATAAAACAACCCTCACGCCTGAGCCAGTTTTT GGGGTAAAGTTAGGCCTAACCTAAATTCTAAGAGAGGTTTCACACATTTAATTTGTCTTACTCTGTTTGAACTAAAAATT CATTGATGTTTCTGCCATCACAGTTAAAATCTAATATTTTCTTACTTCAAATCTAAAATCAACCTAACCTATACTTTCAT AGTATGATTCATGAACTTAATCCTTCTATAATTTGAACATGCTTGTATTCCAGCTTTGTTCTTATAGCAAGGATTAAAGT ACTTCTCCTGACATTTGGCCTGACCTTAGACTTCATAATCTCGTCAAACATCTTTTTGAGTCATCTTAAGTCCTCTCTCT TGGACCCTTCCATAACTTAATATGTATATTATCCAGTCCAACTGGTTTGCCATTAGCCATCCTCTTGAATGTTTCTTTTA GCGTATTAAATTTCAATAGTAACATGTGTACTTCAACAAATAGCTTGTGGAAGTAACTCTACCACCTTTCCTTCATATCC TATATTAATTGTCCTGTCATTCTTTCTTTATCTTTAGCGAGCTTACAAATATTTCATTTCCCAGCTTTGGTTTCTAAGAG TTGGCGTAACCTTTCAAATGCTCTAACTCTTATTTGGCTCACCACCTTCTTTGTATTTTTTGTGGCAGCTTTATATGTAT CTCAATTTTCACCATATTTACATGTGGACCATGCTTTTTAGTATTTCATTGTAACCTTAATCATGCATTGTGCTTGCATC TCACTTCCATGAATCTTTAGTCTTTACCCCTCTAAAAGCCGCCAAAAGGGCCTTGCAAGAAGCATTAGGTCACCAGAGTT CTTTTAAAAGAAGCTTTTGAGGGATTTACCAGACCCTTAAAATTTATATATTTGTAATAAATTGAAGCTTCAATTGGACA TTTGTAGTTGTAATGTCTGAAAAGAAACCACACATAAATGGGGACCTTCCTTTGCAGACTGCTTATTTGTGATACATGAT TTCCATGGTTTTTTAGGGCTAATCATGCTAAAATGTAGTTGCTTTTTTCTTCCTTTTTGACATTAAAAAAGAGGGAATCC TCAACCAGCTTTTTGAGGATTCACGCCTTCCTTATGCAAAAGTAAATTTAAAGGGGGAATATATTTCTGATTATAGTTTG GAAATGGTAAGGCAATATTGATCTTTTTTATGATTTAGGAGAGATAATTAGTTCCAGTGTATGCCGTGATATAGGCAATA TCATCATTCACCTCATGAATAACCTTTTTCTTGGGCTTCGATCCTACCATTCAGCTATTATATATTTTGTTTGTACACAA TATTTTTCCTGCATCTAATTAGTTGTTCTTTTCAGGCTTCTTTCATGCCTGTTCTCGTTCTAGCAGCAAGATTATGTCCC GAGGGAATGGAGGCAACTCTTTTCGCAACTCTCATGTCCGTATCTAATGGAGGGAGTGTCCTTGGGGGATTGATAGGTGC AGGCTTGACACAAGTATTTGGAATTACCAAGGACAGATTTGATAACTTGGCAGCTCTGATAATCCTTTGCAATCTTAGCT CATTATTGCCTCTGCCTCTTCTTGGTCTTCTCCCTGAGGACAATCCTGATGTGAATCCTAAGGAAAATTCTGATGTTGAG ATGAAGTCTAACTGA
CDS sequence (LotjaGi5g1v0312700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTATATTTTGTTCAAGGAGTTTTAGGACTTGCAAGGCTAGCTGTCAACTTTTATTTAAAAGATGATTTGCATCTCGA CCCTGCTGAGGCAGCTGTGATTACTGGTTTATCTGCATTACCTTGGCTTGTCAAACCACTTTACGGGTTTATTAGTGATT CTATCCCCCTTTTTGGTTATCGGAGAAGGTCATACCTAGTTTTATCAGGGCTACTTGGTGCACTTTCCTGGAGTTTGATG TGTACTCTTGTTGACAGCAAATATAGTGCTGCTATTTGCATACTTCTCGGATCTCTTTCTGTTGCCTTCTCAGATGTAGT TGTAGATTCGATGGTTGTGGAGAGGGCGCGTGGTGAGTCACAAAGCACTTCAGGTTCTCTGCAATCTTTATGTTGGGGTT CTTCAGCTTTTGGTGGAATTGTGAGCTCCTACTTCAGTGGGTCTTTGCTGGATAAATATGGAGTAAGGTTTGTTTTTGGT GTCACAGCATTGCTTCCACTAATAACTTCCGCAGTTGCTGTTCTTGTTAAAGAACAACCTATGCTTGGTACAACAAGAGG GCAAAACCTTCCTTTTGCCAGGCCTGAGTTTTTGGAAAGTTCAAAACAAAGCATTATTGAGCTGTGGGGTGCTGTACGAC AGCCCGGTGTTTTTCTCCCCACTCTGTTTATTTTCTTGTGGCAAGCAACTCCGCAATCTGACTCTGCTATGTTCTACTTT ACCACAAATTCTCTTGGTTTCACTCCTGAGTTTTTAGGACGTGTCAAGCTTGTTACCTCCATTGCATCTCTGCTTGGTGT TGGACTTTATAATGGATTTCTGAAGAGTGTTCCTTTACGGAAAATATTTCTTGCAACTACCCTTTTAGGTTCAGCTCTTG GTATGACTCAGGTTTTCCTGGTTACTGGACTAAATCGGAAATTGGGCATAAGTGATGAGTGGTTTGCAGTTGGTGATTCA CTAATTCTCACAGTCTTGAGTCAGGCTTCTTTCATGCCTGTTCTCGTTCTAGCAGCAAGATTATGTCCCGAGGGAATGGA GGCAACTCTTTTCGCAACTCTCATGTCCGTATCTAATGGAGGGAGTGTCCTTGGGGGATTGATAGGTGCAGGCTTGACAC AAGTATTTGGAATTACCAAGGACAGATTTGATAACTTGGCAGCTCTGATAATCCTTTGCAATCTTAGCTCATTATTGCCT CTGCCTCTTCTTGGTCTTCTCCCTGAGGACAATCCTGATGTGAATCCTAAGGAAAATTCTGATGTTGAGATGAAGTCTAA CTGA
Protein sequence (LotjaGi5g1v0312700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVYFVQGVLGLARLAVNFYLKDDLHLDPAEAAVITGLSALPWLVKPLYGFISDSIPLFGYRRRSYLVLSGLLGALSWSLM CTLVDSKYSAAICILLGSLSVAFSDVVVDSMVVERARGESQSTSGSLQSLCWGSSAFGGIVSSYFSGSLLDKYGVRFVFG VTALLPLITSAVAVLVKEQPMLGTTRGQNLPFARPEFLESSKQSIIELWGAVRQPGVFLPTLFIFLWQATPQSDSAMFYF TTNSLGFTPEFLGRVKLVTSIASLLGVGLYNGFLKSVPLRKIFLATTLLGSALGMTQVFLVTGLNRKLGISDEWFAVGDS LILTVLSQASFMPVLVLAARLCPEGMEATLFATLMSVSNGGSVLGGLIGAGLTQVFGITKDRFDNLAALIILCNLSSLLP LPLLGLLPEDNPDVNPKENSDVEMKSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 417 | 417 | 1.5E-250 | ||
| PANTHER | 1 | 417 | 417 | 1.5E-250 | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| CDD | 1 | 394 | 394 | 1.69686E-166 | – | |
| TIGRFAM | 1 | 427 | 427 | 3.4E-151 | ||
| Gene3D | 2 | 401 | 400 | 6.9E-24 | – | |
| Pfam | 6 | 418 | 413 | 2.3E-114 | ||
| SUPERFAMILY | 9 | 399 | 391 | 1.44E-32 | ||
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 31 | 51 | 21 | - | – | |
| Phobius | 52 | 62 | 11 | - | – | |
| Phobius | 63 | 80 | 18 | - | – | |
| TMHMM | 64 | 86 | 23 | - | – | |
| Phobius | 81 | 85 | 5 | - | – | |
| Phobius | 86 | 108 | 23 | - | – | |
| Phobius | 109 | 128 | 20 | - | – | |
| Phobius | 129 | 147 | 19 | - | – | |
| Phobius | 148 | 152 | 5 | - | – | |
| Phobius | 153 | 176 | 24 | - | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 177 | 210 | 34 | - | – | |
| TMHMM | 209 | 231 | 23 | - | – | |
| Phobius | 211 | 231 | 21 | - | – | |
| Phobius | 232 | 250 | 19 | - | – | |
| TMHMM | 251 | 273 | 23 | - | – | |
| Phobius | 251 | 270 | 20 | - | – | |
| Phobius | 271 | 281 | 11 | - | – | |
| Phobius | 282 | 302 | 21 | - | – | |
| TMHMM | 282 | 304 | 23 | - | – | |
| Phobius | 303 | 313 | 11 | - | – | |
| Phobius | 314 | 338 | 25 | - | – | |
| TMHMM | 314 | 336 | 23 | - | – | |
| Phobius | 339 | 349 | 11 | - | – | |
| TMHMM | 348 | 370 | 23 | - | – | |
| Phobius | 350 | 374 | 25 | - | – | |
| Phobius | 375 | 385 | 11 | - | – | |
| TMHMM | 385 | 407 | 23 | - | – | |
| Phobius | 386 | 407 | 22 | - | – | |
| Phobius | 408 | 427 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0312700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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