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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0314400 |
| Transcript ID | LotjaGi5g1v0314400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amine oxidase; TAIR: AT4G14940.1 amine oxidase 1; Swiss-Prot: sp|O23349|AO1_ARATH Primary amine oxidase 1; TrEMBL-Plants: tr|I1NGE1|I1NGE1_SOYBN Amine oxidase; Found in the gene: LotjaGi5g1v0314400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63266645..63271223) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTTATATCTCCACAGTTCTGTGGAAAACATGATTCCTCAATGTCTAATCCTAGCTTTTTTTCTGAGATTCAGCTTC ATTAATAGTTTGCCTCACCCTTTAGACCCTCTCTCACCGGCTGAAATCAACAAAACAAGACACATTGTTCACGAGTCTTA CCTTGGTGCTATTCCTAACCTCACCTACCATTTTGTGGATGTTGAAGAACCAGACAAAAACAATGTCCTAAACTGGTTAT CTTCAAATTCAAACACAAAAGAAAAGCCTTTCATTCCTCGTCAAGCTAAGGTAGTTGTTAGAGCCAAGGGTGATGAGACA CATGAGCTTGTAGTGGACTTAACCAAAGGGTCCATTGTATCAGATAAAATCTACACAGGTCATGGATACCCTCCTATGAC ATTCAGTGAGCTTTTTAGAGCAAGCAAATTGCCTCTTAAGTACCCCAAATTCCAAGAGTCAATAACCAAAAGGGGCTTGA ACTTGTCTGAAGTTTCTTGTGTGCCACTCACAGTTGGTTGGTATGGAGAAAAAAGCACAAGAAGAGCCCTCAAAGTGGTG TCCTATTATAGGGGAGGATCAGTTAATGTTTGGGCAAGGCCTATTGAAGGAATCACAGTGCTAGTTGATGTTGATTCAAT GAAGATTACCATGTACAATGACAGGTATTTGTAGATAAGCTCACAAATTAGTTTTAGAATTTGGGTTAGGCCTAACCTAA TTTTAAAATGGTATCGAAAGCCTATTTTGGACTTGTTTATAGGGTCACCCATAAAAAATGGGTCACTCACATATGTCTAC TCCTACAAACTTCACGCTTCAGACTTCATGCCTTGGGCGCGAGAATGTGTATTGAGAAGTCTCACATTAACTAAATATAT GACTAAATAAGTACTTATAAAGGATAGAGTGATCCTCACTCCTAATTTAACTTTAGGGTAGAGTTAGGCAGAGCCTCATC TATCATATTAGTTAGAAACTACTCTTACTGATCAATTAGTTAGGAATTTACTCTATATAATGTTATAAAATACACAATTC AGTTCTTTCTCTACAACAGGTACAGGGCCCCTATGCCTAAAGCTGAAGGCACAAATTATCAATCTTCAAGCAGCAAGAAA AAAACATCTGCTTCCTGTAATGTTTCAGATATTGGGTTCACCATCAAGGACCATGAGGTGAAATGGGCTAACTGGGCTTT CCATGTTGGGTTCAATGCTCGGGCTGGGCTGATCATATCAGCTGCTTCTATATTTGATGCTAGAAAAAACAAGTATAGGA GAGTGCTGTATGGGGGTCATGTGTCAGAGACATTTGTTCCTTACATGGATCCTACAGAGGAATGGTATTTCAAGACTTTC TTGGATGCTGGGGAATTTGGGTTTGGACGTGCAGCTGATAGCTTGAAGCCCGAGGTTGATTGCCCGGGCAATGCAGTTTA TATGGATGGGTACATGGCTGGGCCTAAAGGAGAGGTGCAGCAGGTGCCTAGGGCTATTTGCATTTTTGAGAGGAGGTCTG GCAATGTGGCCTGGAGGCACTTTGAAATCAACAATCCCACCAAAAAAGTGGTAATGTATTGTACTTCTATGTTATAGTCA TGTTTGGACTTTGGATACGCGGTGAAGTCAAAATCACAGTGAACAACCACAAAAGATAAGAAAAGTTGCTTCTGTCCATG GTGATTTTGGTTCACGGTGGTCTGACACAGTGTATCCAAACATGCATATAGCAGTTTTAGTTGTAGTTTTGCATATAGCA GTTTTAGTTGTAGTTATTTCCAATTTGTTGTTACACACTTGCTGTGTTTTTCTGCAGATAAGAGAAGGAGAGCCTGAGAT TACTTTGGTGGTCAGAATGGTTTCTACTGTGGGTAACTATGATTATGTTCTTGACTGGGAATTCTCGCGAAGTGGCAGTA TCAAAGTTGGGGTAAGGTTCTTTGAATATATGACCATTTTACCTTAGAGGTGATCAATAGTTTGAAATAGGGAAGAAATA AGAGCCTGATTTGAGTAACTGTATAGATAATCAGTCTCTAGACCTTAGTGCATGATTGGATCAGCATTCTCGAAATTGAT TTTGGATAGAAGTGATTTTAGAAAAATTAATTAAGCCCTTAAATAGTTTATTGTCTCATGCATAGGTGGACCTGACAGGC GTACTACAGATGAAAGCAGTCCCATATACACACAACAGCCAGATAAAAGAAAGAGTGTTTGGAACCTTGGTGTCAGAAAA CACCATTGCCAACAACCATGACCACTACATAACCTACTATCTTGACCTTGACATTGATGACAACCACAACTCCTTCATCA ATGCCAAAATGCAAAGGGCAAGAGCAACTGGCTTTGGAACACCAAGGAAGAGTTACTGGACTGTTGTTAGAGAATCTGCC AAGAGGGAAGCCGAGGCGAGAATTCAGCTTGGCTTGGAGCCAGCTGACCTATTAATAGTCAACCCCAATATAAGAACAAG GCTAGGGAATCAAGTTGGTTACCGGCTGATCGGTGCACAGCCGGTAACTTCTCTGTTGTCTGATGATGATTACCCAGAAA GAAGAGTGTCTTACACAAAGTATCAGGTGTGGGTCACTGCCTATAACAAGTCAGAAAGATGGGCTGGAGGGTTCTATGCT GATAGGAGCCATGGAGATGATGGCTTAGCCATTTGGAGCCAGAGGAATAGAGAGATTGAGAATAGAGACATAGTGCTATG GCACACAATTGGGATCCATCACATTCCGTACCAAGAAGATTTTCCAGCAATGCCAGCAGTCCATGGAGGATTTGAACTCA GGCCAGCTAACTTTTTCGAAAGTTGTCCGCTTCTTTGAATGAAAGTACTGTTCTACCTTAATGCAAGCATGTTCAGCTAA TTAACCAAACCAATAATAATCCAACATGGATATAGATACACAAGATGAAAGGTTCTATAGAAATATTTTTCTGTTATCAA GTGATATGTTGTTAAATAATATTTTCACTTAGGTATCTTAAATGATTTGAAATTGAATGAAAAATATGTTCAAAGTACTA ATGGCGTAGTAAACAGTATCTTTAAAAACTCCACCGAAAGATCTAGTCTCACCCAGATGTTCCCAACTCAGAACAAAAGT TTATCCCGTGAGTATACATGTGTTCATCAAAAAACCTTTCAATTGAGCCATCAGTATGCCTTTATATCTTGAGAACCCAA TTATTACCAATGGGAATAAATCCCTGGTGGAAGATATACAATTATGTAGGTATGGTTCATCTCAAAGGGCCTCTATCTTA GCAACCATTGCCTTGTAACAACATTCTATTTGATTTGCTTCATGAAAGGAACTAGGCAAGAGAAGAATGAAACAAAGGGA TGCCCTCATTCAATTCAATTTGATTAAGTTGAAAGAGAAAAAGGGTATGTAAAGAACATCAAATAAAATCCAATCAGTGC AAAGGTACCCTACCTGCTAATTCAGCAATGACCTTAAATTACATTAATCCTTCAAATTTTGTTGAGTTGGTTCAGTCAAA TGCATACCTTGCTAATGTTGAGAAGTGCAATTAGGCCAGTACACAAGCTTTGGTGATTTTGCTTTAAGGACCGGGTTGCT CTCGAAAAAATTGGTTGGCCTCAGCTCAAACCCACCACTCAAGGTTGGCATAACCGGAAAATCTTCCTGGGAAGGAACAT GATGAAATCCCATCGTGTACCATAGTACTATATCCTCGTTCTCAATCTTCCTATCCCTACACATTCAATTCACAAACACC AAAACATGAACCATTTTTCACACTTGTGTTTATGCATATTATGAAGAGTGTGTCCAAAATTTGAATTGAAACACATAGAT GTTAGAATGAATTCAAGAAGTGACTCACCTCATGCTCCAAACAGCTAAAGTATCATCGCCTTGGCTACGGTCAACAAATA ATCCTCCAACCCATTTTTCAGATTTGTTGTAAGGTGTGACCCATACATTATAATTAGTGAAAGCAGCTCTGATTTGTGGA TAATCATCATTAAGCAAAAGTGGATGCACCACTGAGCCTGGAAGCAAACGGTACCCAATTTTATTCCCTAGCTTTGTCTT CTTATTAGCATTTACTACTTGTAGCTCATAAGGTTTCAACCCCAGGTTGAGTCTGGCATCAGCTTCTGTCTTAGCAGTTT CACTTACAACTGTCCAGTAACTTTTCCTAGGTGAGGTGTGATCTTTCACTCTTTCAGTTTTCAAACTGGTCTTGACAAAG GAATTGGCTTCACCATCAATGTCAAGGTCAAGATAATAGGTCAAGAAGTGGTCATGATAGACACCAATGGTATTCTCTGC CAGCAATGTGCCATAAATGTCTTCTTTGATTTGATCTCTGTTGGTAACTGTCCCTCCCTTAATCCCTAATATTCCAGTAA GCCCAACCTATATAAAATATAACATGGAGTTAGCTTCTAAACAACAGGCACATACTATTTCAAGGTAAAATGAAAATTGT AAATGTGTACATAACTTAGACCTCTGCTTCATTTGTTCCAATTTCTATTTGAAAGAGAAGTTAAGCTTGAGAATAATGTG CACAATAATAACACACATG
CDS sequence (LotjaGi5g1v0314400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCCTCAATGTCTAATCCTAGCTTTTTTTCTGAGATTCAGCTTCATTAATAGTTTGCCTCACCCTTTAGACCCTCT CTCACCGGCTGAAATCAACAAAACAAGACACATTGTTCACGAGTCTTACCTTGGTGCTATTCCTAACCTCACCTACCATT TTGTGGATGTTGAAGAACCAGACAAAAACAATGTCCTAAACTGGTTATCTTCAAATTCAAACACAAAAGAAAAGCCTTTC ATTCCTCGTCAAGCTAAGGTAGTTGTTAGAGCCAAGGGTGATGAGACACATGAGCTTGTAGTGGACTTAACCAAAGGGTC CATTGTATCAGATAAAATCTACACAGGTCATGGATACCCTCCTATGACATTCAGTGAGCTTTTTAGAGCAAGCAAATTGC CTCTTAAGTACCCCAAATTCCAAGAGTCAATAACCAAAAGGGGCTTGAACTTGTCTGAAGTTTCTTGTGTGCCACTCACA GTTGGTTGGTATGGAGAAAAAAGCACAAGAAGAGCCCTCAAAGTGGTGTCCTATTATAGGGGAGGATCAGTTAATGTTTG GGCAAGGCCTATTGAAGGAATCACAGTGCTAGTTGATGTTGATTCAATGAAGATTACCATGTACAATGACAGGTACAGGG CCCCTATGCCTAAAGCTGAAGGCACAAATTATCAATCTTCAAGCAGCAAGAAAAAAACATCTGCTTCCTGTAATGTTTCA GATATTGGGTTCACCATCAAGGACCATGAGGTGAAATGGGCTAACTGGGCTTTCCATGTTGGGTTCAATGCTCGGGCTGG GCTGATCATATCAGCTGCTTCTATATTTGATGCTAGAAAAAACAAGTATAGGAGAGTGCTGTATGGGGGTCATGTGTCAG AGACATTTGTTCCTTACATGGATCCTACAGAGGAATGGTATTTCAAGACTTTCTTGGATGCTGGGGAATTTGGGTTTGGA CGTGCAGCTGATAGCTTGAAGCCCGAGGTTGATTGCCCGGGCAATGCAGTTTATATGGATGGGTACATGGCTGGGCCTAA AGGAGAGGTGCAGCAGGTGCCTAGGGCTATTTGCATTTTTGAGAGGAGGTCTGGCAATGTGGCCTGGAGGCACTTTGAAA TCAACAATCCCACCAAAAAAGTGATAAGAGAAGGAGAGCCTGAGATTACTTTGGTGGTCAGAATGGTTTCTACTGTGGGT AACTATGATTATGTTCTTGACTGGGAATTCTCGCGAAGTGGCAGTATCAAAGTTGGGGTGGACCTGACAGGCGTACTACA GATGAAAGCAGTCCCATATACACACAACAGCCAGATAAAAGAAAGAGTGTTTGGAACCTTGGTGTCAGAAAACACCATTG CCAACAACCATGACCACTACATAACCTACTATCTTGACCTTGACATTGATGACAACCACAACTCCTTCATCAATGCCAAA ATGCAAAGGGCAAGAGCAACTGGCTTTGGAACACCAAGGAAGAGTTACTGGACTGTTGTTAGAGAATCTGCCAAGAGGGA AGCCGAGGCGAGAATTCAGCTTGGCTTGGAGCCAGCTGACCTATTAATAGTCAACCCCAATATAAGAACAAGGCTAGGGA ATCAAGTTGGTTACCGGCTGATCGGTGCACAGCCGGTAACTTCTCTGTTGTCTGATGATGATTACCCAGAAAGAAGAGTG TCTTACACAAAGTATCAGGTGTGGGTCACTGCCTATAACAAGTCAGAAAGATGGGCTGGAGGGTTCTATGCTGATAGGAG CCATGGAGATGATGGCTTAGCCATTTGGAGCCAGAGGAATAGAGAGATTGAGAATAGAGACATAGTGCTATGGCACACAA TTGGGATCCATCACATTCCGTACCAAGAAGATTTTCCAGCAATGCCAGCAGTCCATGGAGGATTTGAACTCAGGCCAGCT AACTTTTTCGAAAGTTGTCCGCTTCTTTGA
Protein sequence (LotjaGi5g1v0314400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIPQCLILAFFLRFSFINSLPHPLDPLSPAEINKTRHIVHESYLGAIPNLTYHFVDVEEPDKNNVLNWLSSNSNTKEKPF IPRQAKVVVRAKGDETHELVVDLTKGSIVSDKIYTGHGYPPMTFSELFRASKLPLKYPKFQESITKRGLNLSEVSCVPLT VGWYGEKSTRRALKVVSYYRGGSVNVWARPIEGITVLVDVDSMKITMYNDRYRAPMPKAEGTNYQSSSSKKKTSASCNVS DIGFTIKDHEVKWANWAFHVGFNARAGLIISAASIFDARKNKYRRVLYGGHVSETFVPYMDPTEEWYFKTFLDAGEFGFG RAADSLKPEVDCPGNAVYMDGYMAGPKGEVQQVPRAICIFERRSGNVAWRHFEINNPTKKVIREGEPEITLVVRMVSTVG NYDYVLDWEFSRSGSIKVGVDLTGVLQMKAVPYTHNSQIKERVFGTLVSENTIANNHDHYITYYLDLDIDDNHNSFINAK MQRARATGFGTPRKSYWTVVRESAKREAEARIQLGLEPADLLIVNPNIRTRLGNQVGYRLIGAQPVTSLLSDDDYPERRV SYTKYQVWVTAYNKSERWAGGFYADRSHGDDGLAIWSQRNREIENRDIVLWHTIGIHHIPYQEDFPAMPAVHGGFELRPA NFFESCPLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 3 | 649 | 647 | 0.0 | – | |
| PANTHER | 3 | 649 | 647 | 0.0 | ||
| Phobius | 4 | 14 | 11 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| SUPERFAMILY | 19 | 119 | 101 | 1.6E-22 | ||
| Phobius | 20 | 649 | 630 | - | – | |
| Gene3D | 21 | 120 | 100 | 1.5E-27 | – | |
| Pfam | 22 | 113 | 92 | 1.3E-20 | ||
| SUPERFAMILY | 118 | 224 | 107 | 4.45E-34 | ||
| Pfam | 120 | 214 | 95 | 3.6E-27 | ||
| Gene3D | 122 | 213 | 92 | 8.3E-28 | – | |
| Pfam | 243 | 648 | 406 | 1.2E-126 | ||
| SUPERFAMILY | 243 | 648 | 406 | 4.71E-136 | ||
| Gene3D | 244 | 649 | 406 | 1.6E-151 | ||
| ProSitePatterns | 391 | 404 | 14 | - | ||
| ProSitePatterns | 613 | 626 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. | ||
| Molecular function | Primary amine oxidase activity | Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide. | ||
| Biological process | Amine metabolic process | The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. | ||
| Molecular function | Quinone binding | Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0314400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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