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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0314700 |
| Transcript ID | LotjaGi5g1v0314700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase; TAIR: AT2G32150.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|A0A0L9U119|A0A0L9U119_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0314700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63289848..63292146) extracted from Lotus japonicus Gifu genome v1.2.
CGGCAATGTAGAAAGTTTCCCGCGGGCCATAGCAGTTAGTTATAGAAAAGAAGTAATTAGTACGCGGCTATCGTGTGGAG CCCACGCCTACTCGGCTTCCAACAATTTGGAAACGCTGACTCACCAATCCTAATCCTTCATCCATCCATCCCTTGTTGTA TTGTGTCTGTTCCAATCCAAATCCTCTCTATTTAAATCAACACCCCATAGTCCCATACCCCTCTGCCCCTGCTCATTCAC TATAAATTCTCATCTCTGTCAAAGCTTCATTCCGCTCTCGTCTCTCACATTTCACTACTCTCCTTCTTCTTAATTTTTTC AGTCATGGCTTTTGGTACCAGAGCAGCTTCTCCTTTCGACTGCATCATCTTCGGTAAGTTACTAATACCTCGGTTATGTT TTGTTTTCAGTTTAAAAGTTCGTTTGAGACATTGGAATTCGAGATCACATATTTCAATGTCTCAAACATTCTATGGAAGA AATATACTTTCAAATTGAAAACCAAAACCAAAGAGACGCTTCATCTTCATCCACGTCAAAACAAAACCATATATCACTTC TTGTAATTAACAACTCTTATAACTAATTAAACAGATTTAGACGACACCTTGTACCCTTCCACCACCGGAATCGGCGCCTC CGTCAAGAAAAACATCGACCTCTTCCTCATCGAGAAATGCGGCTTCTCACCGGCTAAAGCCTCCTCCCTCCGCGTTGAAC TCTTCAAAACCTACGGCAGCACCCTCGCCGGTTTGCGAGTAATCACTCAACTATAACCAAATTCCATTTTCAAATTTCAA TCAATCAACACTCTCTTCAAATTCAACAATAATCACTCACCTCAACTTGTTAATTACTTGCAGGCACTAGGCTATGATGT CAGCGCTGAAGATTACCACAGTTTCGTCCACGGAAGGCTACCTTACGATCAAATCAAACCTGATTTTCAGTTACGCAACC TCCTACGCTCCATCCAACAAAGAAAAATTGTATGTTATTTTCAAATTGAATTTTTCTTCCATTAACTTCAAATTAATTGT TATTTATGTATCTTCCTAATTTTGGAAAATTTCTTTTGAAGATTTTTACAAATTCAGATAGGATTCACGCGCTGAGATCG TTGGATCGTCTCGGAATCCAGGACTGTTTTGAGCAAATCATATGCTTCGAGACCATGAACCCGAATCTCCCTCACGCGAC CCGACCCGATGAGTTCCCGGTTCTGCTGAAACCGTCGCTGGATGCTGTCAAGGTTGCTATCCACACTGCCAACGTGGATC CTCGTCGTACGGTGAGACGATGTTAACTACTCTTCGAGATGTCGTTTTCTTACACGAAATAAAAACAAATTGAAATTTTT ATATGAATTTAATTAAAATGTTTTAAATAAATGGAGAATAAGAATACCTAACACGTTTCAATTTTTGATTGCAGCTGTTT TTGGATGACAGTGTTCACAATGTTGCTGCGGGAAAAGAAATGGGTCTTCACACAGTATTGGTAACTTTCTTTCTTAACCG ACGTCGTATCATGATGATTAATAATTATGATTAATTATGACTAATTAATGGATTTAATTTTGTGAAGGTTGGGAAGACGG TGAAATGCAAAGGAGCAGATTATGCGGTGGAGAGTGTGCATAGTGTTGCTGAGGTGATTCCGGAGATCTGGGCAAATGGA ATGGACGGTGGAGATGATGATCAGAGGATCAAACGGTCGAAGAGCGAATTGGATTCTGTTCTCTCAACTGCTGCAGTTGG AGCTTGAGGAGGTGTGAATGAATCTGATGCTGCTGTAAATACCCGACCAATAAAACAAACGATGATGTGATGTGACCAGC AAAATAAAAAATCATATGGATGATGACGAAGACTATGAGCTAATGTCACCCTCCATGGCCAGATTTATTGGCGTCATGTT AATCATGTGTGAATATTGTAAAGATGTCATCATGGTGTACAAATTAACCATCGTCCACGGAAATTAATAAAATATCCTAA TTGTATCAAAGGCATCAAATCAAATGGATAACTAATGAAGTCAAGTTAGTACTAAATCTATTAGAAGCTTTCAGTTTCCA CGTTGTTTGCACTATGATATGATAGCTGCAAAAATGTAATTTTATATGTTTTCGGTGGGTGGAGTATCGTTAAGCACAAA TTCCATTTGAATTATGAAATTTAAACGAAACCATTGGTCGGTTTGGTTGGTTTGCCCATATTTAAAAGATGTTACATGAC TTGACTCCATCGATTAAGCATTTTACAATGAAAGCCACTTGTTAGGACTTAGGATCATG
CDS sequence (LotjaGi5g1v0314700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTTGGTACCAGAGCAGCTTCTCCTTTCGACTGCATCATCTTCGATTTAGACGACACCTTGTACCCTTCCACCAC CGGAATCGGCGCCTCCGTCAAGAAAAACATCGACCTCTTCCTCATCGAGAAATGCGGCTTCTCACCGGCTAAAGCCTCCT CCCTCCGCGTTGAACTCTTCAAAACCTACGGCAGCACCCTCGCCGGTTTGCGAGCACTAGGCTATGATGTCAGCGCTGAA GATTACCACAGTTTCGTCCACGGAAGGCTACCTTACGATCAAATCAAACCTGATTTTCAGTTACGCAACCTCCTACGCTC CATCCAACAAAGAAAAATTATTTTTACAAATTCAGATAGGATTCACGCGCTGAGATCGTTGGATCGTCTCGGAATCCAGG ACTGTTTTGAGCAAATCATATGCTTCGAGACCATGAACCCGAATCTCCCTCACGCGACCCGACCCGATGAGTTCCCGGTT CTGCTGAAACCGTCGCTGGATGCTGTCAAGGTTGCTATCCACACTGCCAACGTGGATCCTCGTCGTACGCTGTTTTTGGA TGACAGTGTTCACAATGTTGCTGCGGGAAAAGAAATGGGTCTTCACACAGTATTGGTTGGGAAGACGGTGAAATGCAAAG GAGCAGATTATGCGGTGGAGAGTGTGCATAGTGTTGCTGAGGTGATTCCGGAGATCTGGGCAAATGGAATGGACGGTGGA GATGATGATCAGAGGATCAAACGGTCGAAGAGCGAATTGGATTCTGTTCTCTCAACTGCTGCAGTTGGAGCTTGA
Protein sequence (LotjaGi5g1v0314700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFGTRAASPFDCIIFDLDDTLYPSTTGIGASVKKNIDLFLIEKCGFSPAKASSLRVELFKTYGSTLAGLRALGYDVSAE DYHSFVHGRLPYDQIKPDFQLRNLLRSIQQRKIIFTNSDRIHALRSLDRLGIQDCFEQIICFETMNPNLPHATRPDEFPV LLKPSLDAVKVAIHTANVDPRRTLFLDDSVHNVAAGKEMGLHTVLVGKTVKCKGADYAVESVHSVAEVIPEIWANGMDGG DDDQRIKRSKSELDSVLSTAAVGA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SFLD | 7 | 234 | 228 | 0.0 | – | |
| SFLD | 7 | 234 | 228 | 0.0 | ||
| PANTHER | 8 | 250 | 243 | 1.6E-126 | – | |
| PANTHER | 8 | 250 | 243 | 1.6E-126 | – | |
| SUPERFAMILY | 10 | 233 | 224 | 4.21E-28 | ||
| TIGRFAM | 12 | 206 | 195 | 4.3E-73 | ||
| Gene3D | 13 | 224 | 212 | 2.3E-41 | ||
| Pfam | 14 | 206 | 193 | 1.0E-10 | ||
| Gene3D | 24 | 93 | 70 | 2.3E-41 | – | |
| TIGRFAM | 161 | 206 | 46 | 5.2E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0314700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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