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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0316800 |
| Transcript ID | LotjaGi5g1v0316800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | OB-fold-like, putative isoform 2; TAIR: AT5G19300.1 methyltransferase C9orf114 protein; Swiss-Prot: sp|Q5T280|CI114_HUMAN Putative methyltransferase C9orf114; TrEMBL-Plants: tr|I1NGB5|I1NGB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63462978..63469640) extracted from Lotus japonicus Gifu genome v1.2.
CCAAAACCCTCTTTAACCCTCCAACGCCATCGAAAGCAAGCCTCTGTTGCAGACAGACATGGGGAAGAAGAAGAAGAAGG AGGGAACAGATTCCGATGTCGAACCAGAACTCAACGCCGCCAACAATGGCAACATCGACGACTCTCACCACAAGAAGAAG CATAAGAAGAAGAAGAAGATGAAGAAGACAAACCAGTTACCCACAGTCAGCATAGCTGTTCCTGGTTCCATCATTGACAA CGTCCCAACCCTCGAGCTCGCTACCCGGGTACCCTTCAATCTTTTCCCGCTTTTCCTTATTCATATCTCTGTTGATTTTC GCTGCCTCTTCGTTCTGATTTTTCCCATTTCAGTTGGCTGGTCAAATCGCTCGTGCTGCAACGATTTTTCGAATCAATGA GGTTGAAATTGCTGTTCACTGCAATTTTTTGAATCAATGATTCTTCCATGTTGCTGATACTGATACTGATGATTGGAATT TGTGTATAAAATAGGTGGTTGTGTTTGATAATAGTGGTAACCTGGATGAAGATACCATGCTGGATAATGCAGATGATGAA AGTGGTGCTGCTTTTCTCATCCGAATTTTGAAGTATCTTGAGACACCTCAGTATTTGAGGAAGGCTCTCTTCCCAATGCA TAACAGTCTAAGATTTGTGGTTGGGCATGCTCCTTTCCTGCCATTAACTACATTTTCAATTTGATTAGAATCTTAGTCCA CATGTTTAACTTCAGTTATATCTGTATTGCATTTTGCAGGGACTGTTGCCGCCCCTTGATGCACCGCACCATCTGCGCAA ACATGAATGGGGTTCGTATAGGGAAGGTAGGCCTTCGTGTTCTAGTAGAATTTCTAATGTTATTATCGATCAAAAGTGTA TTATTTTTTAAAAAATCACTTGAGTATGATTTAAGTTTCCAGCCTTATGTTGGTCAGTTTTTGTGCTATAGATGATAGCC ATCCTGTGTGTTTATCAACGAATAGGTCATTGGAACTACTAATTACGGCAAGTTTGATTTTTTCTTTTTGGATTCCAATG GTGCGATTAGTCCATTATCTGACCCCTTCTAGTCGTAGCGGGGTAATGGCCGGTTTTGTTGTTGTTGGTTCTCCACTTCT CCCTGATGGATATGTAGAGGGTTGATGGTGTTTAGTGTATTGGTTAACTTGTTTGTTTTTAGTTTTTACCATGTCTGTCT AATCTTGTGCCTGCATTTCTTCGACTTAAGAGGACATATGATCATATGATCCTCATTTCAACTCCTGTTGTCCTCTCACT TTGATCAAGTTTTTTCTTCATATTTTTTAAATTAATGTTAAAGCAGTTTTTTTTTTACATTGCTGTTATTTTGCTCCATG GTTACTTTTGCTAACTTTGATATATTGCAATAACTTCTTAGGTGTTACGATAAGACAAAGAGATTCAAACTCTGCGGCAA CACTAGTTGATGTTGGTTTAGCTAAGGTATGCGTACACATGTCATGGATTACTTGGCCTGAATTTTAACTGTTTGTGTAT ATTTTCTTAAATACTACCCTTCCAATTCTCCTTTACCTTTCTTCCTTCATTTCCCTTCTTCTTCTGGCATCCTGCCTGAA GACTTCTTATTCCCTTATCCATATTTCTGTTCATGTTTGCCATGGTGTTATTTGATATTGGCATATGAGAGGAAATCCAA TGATAGATGTCTTGAAATACCATCACAGCACAGCATTCCCCATTCCTCTCAAAAAATTCGTTCCCATTTCTTTCATTTTA ATTTTGAAGTTTGTAATGTTTGTTGATTGTCAATTACATTTTATAGATTAAAACACTTTTATGACCAGATTCTGTTCTAT TAATATTGTATGGCTATTAAGCAGACTTGAACTTATTTGTGCATGATCTGATTCTGTACACAACACATGCAGAATGTTGT AGTCGACCAAATACTTGAACCAGGAAGAAGAGTTACTGTCGCCATGGGTGCCAACCGCAATTTGGATTCTGGTAATGAAT TTATATCTTTTTAATTTAGTTCTGCAGTTCTGAATTCCTCCATTTTAGTTTGTCTTTTATTTGAAGTTTATGCTACATGG TCTGCAAAATATTTTCATGAAACAATTGTATCAATAGCTATCCTATATTTGTTGTGCATGTCAAATCAATGTTTCTTAGC TTACTAACTTAAGGTCTATTCTTATGAACCTAATTGCATTTGACTACATCTTAAACATTAATGAATAAATTCCATTTATG ACAAGAGGACAGTAAAGTATGGGGTGATCACTGAGGAAGTGTAGCCATAAAGTTACTGACTATGTGAATTTTAGCTGATC TGCTATGCTGTACTTCATCTAGATTTGCCACGTCAAGTTGTCTCATCATTGAAGCCTAGGGAAGACGGAACATATTGGGG ATATCAAGTTCGTTATGCGCATAATATTAGCTCAGTATGTAAGGATTCTACATTCGAGGTATCCTTCCATCTCCTAGACA CACGAAATGTGCGCATTTTAGTATCCATATTCTAATATTCCTTGTTCTACTCATGAGCCTTTCTTCTATTGATTTGTTAT ATTGACAGGGTGGCTATGATTATATAATCGGTACCTCTGAGCATGGTCAGATTATCAAGTCATCTGATCTTGAATTACCT TCTTTTAGGTATTCGCTTTATGAAGTCAACTGCAATATTACTATTAGTTGGTTTAGGTGCTGATTTCAACCTTCCTTTAG GAACCTGTTTTAAGTGGGTTCTTTGGTGTATCATTTATGAAAATGGTTTCTTATCATCATAATATGGACATTTGCAACTA TGAATGTGATGTTGTATAAAGACCTCCAGTTATAGGTTTTCTTTTCTTTGTAACTTCTACGTACTTCGAGCTTCACTTAC TGACTAAATTTGAGATGTGAAATTTAACAAATTATGTCTGTGATGATGCAAGGCATTTTATTCTGAATTGATTTATTTCG TTCCACTGAATTGGTAGGCATTTATTGATTACCTTTGGTGGACTGGCTGGGTTGGAAGAGAGTATTGAAGAAGATGATAA CTTGAAGGTATTGCATTGTTCAGTTAGTTATTTTTGTGAGATCTTAATTGCGGTTCCCTTTTTAAGATTATTCCCAATCA GAGGTTCCATAAATTTGCCAGAAATTTGGGCTACATGCCTTTTTCTGTTGTCACATTTCTGTCTGGTATGCTAATTAGAA GTCGAAAACTCTACAGGTTTTAATCCTGGATATATTTGAGGGTTTCCACCTACGTGTTTGGGATCTTTTTTTCTATGGAA TACTTGTCTTTCTTAGGTTATATAATGTCATTTTAAATGTACTGTTTTCATTCAAGAAATTTGTGCATGGATTGTAATAT TGAGCATTTCTGGATACATCTCTTTTTAAAGTCTAAAGAAAGGAAGAAGTATGGTACTGAATATAAATTTTCTTGCCAAA ACATGCAGGGTAAAAAGGCACAGGACGCTTTTAATTTGTATTTAAATACATGTCCAAATCAGGGTAGCCGAACAATTCGG ACAGAGGTACTATCTGCCTGATCTTTAGTCAATTTGTATTATGTAAATTAATGTCTATCTAGGTTTTAGTGATTTCTTAA TTCTCATCTTTTTTGTGTAGGAAGCTATTTTTATCTCTCTTCAGTATTTCCAAGAACCAATCAGCAGAGCATTGCAGGGT TGAGTATTGTTGTAGTCTTTAAATTCATATACTTCAGGCATTGTTTCTCCAAATTATGGCTGAAACTGAGACACGAACAA TATTAGTTCAAAAGCAAAATTAGAAATTGTCCGTCTAGGCGTCTACGGTCTACCTCATAGCAAACTGGCCATGAGTTTAT AGGATTCTTCTTCACGACTAATTTTGTAAGTGGTGACACTTTCTGTTTACCTTGGTTGTAGAATTTGCAAACAGTATTCG ATCTTAATATGTAAGTGAGAAATTAGAAGTGCTAATGTATGAGTATCTGTTGGATAACTGCTATTGCATCCAAAGGGATA GATGTTCTTTAGAGCAATCCTGTATGACTTGGAATGTAGTGTAACTACGTACTTTCATAAGCATAAAATTACATTGCTCA CTAATGAGCTCTGGATTTGGCACCCCAGGGCTTAGAAATGCCACCCCACTTAAAAGTGGGGAAATACTATTATGCCCCTC CGTGTTTTATTTCGGACTACCAATGTCCGAAATATTTCGGATATATCGATTCCGATATGCATCGGATGGTAAAGTTCCGA ACACTGTTACTATTAAATCCAAAACACGGGCTCATTTCTCATTTCATTCCGAAATCCTTCTTGAACTTCCATTTCCGAAG CCCTCCAAACCTTCACAGCCTTCATCGAGCTCGCCTTCATCAGAGCTCTCTCTTCATCATCTTCTTCGGAGCTCTCTTCT TCGTCATCTTCTTCGTCAACTGCAATAGAGGTAATCTTCGTCATCTTCTTGTTAGGGTTAGGGATTCGAATGGGTTTTAG GGATTCTTGAAATTAATTTGTGGATTTAGGGCTTTAGCGATTTGAAGATGTCTGATTGTTGGGTGAAATTGTTGGGTGAA ATTGTTGGGTGAAATTGTTCATGAACGGGCACCATGTTTTCACACCCCAGAACGAATTGAAATCCACATCCCTTTCACTG TTTGTTATCTACCCTGAGTTTTGAGTTCTGGAAGCTGCATTTTCTCACCTGTTATCTACCATGTTTGCATTTATTTTTCT TAACATTGATCCATTAGTTTTTATTGATAGGCAAGCAGTTGAAACTGTGAAATTCCCCTCTGAACTTAAGAACTTGAGCA AAAAGATTTGATTGAGCACAAAGGGAGAACTTGACTTATCTTGTTTCAGGTACACTTACTCTCAATCTCATGAATAATTG AGACAGAACCATTACTCTTTTCTAGCATAACTTTTGATTTGCATGAAATGGTAGCTGTGGAACAATAAATATAGGAAGTA TGTATACGTGTGTCATCATTGAGAAATCATGCTAATGGGACTAAATGATAGACAAGTTAAAGTTGAAATTCATGTAATTA TACCTGAGACTCAAGACACCAAGTCAGTAGCTGCATAGCTGCATATATTTTTTGTAAGCAGTAGCACTATCCTTCAAGTT TCTAATACTATCCAATTTATATTGCCTAGTTTGATTACTATGTCTTTTTCCCAATGTATTTTCTATTATAACAAAAACAT TAAGGAAGAAATCATTCAGTACTAATACCATGGAGTATTTGGGTCCCAAAATATTACCATTATCTCAATCTTTGGTCTGT AACAAATCTGATCCTATCTCACCTGCCCAGATCCTATCTCAATCTTTGGTCTGTAACAAGTCAGTAGCTGCATATATTTT TTGTAAGCAGTAGCACTATCCTTCAGGTTTCTAATACTATCCAATTTATACAAATCCTGTGACCAGACTATACCATGTTA ATGGAACAATAACCAGACCTCTGTTTGTTTTACTATGTGCAAATATTTTGATGCCATATTTGGTATCTTTGGTGCTGCTG TGTAAAATTAGCTACCATTGACTCATCTATTGACTCCAATTCCAGTTATCTACATAATTATGCATGATTAATGACAGAAT GTTATGGAGTTAGCTACCATTGAAAGTCTGGGAGAATTGCTCTAGAGTTGTGCATGATTTAATGACAGAATTGCTCTAGA GTTAATGACAGAGTTATGCATGATTTAATGACAGAATTGTTCATGAGTTAATGACAGAATTGCTCAATAGTGATTGATTT CACCACTAGAACACATTTAAATTCTTGTGGGATGTTGGTTCTTGGTGAGAGAAGAAAGGGGGTGAAAGAGATGTATTATA AATAGAGGGACAGTACTAGTCTCATGTTGATGTTATCAATAGGAGTTAAGCTCAAAATCTTATGTATCAACACAGCTGAT CATGTCAATAATGCTAACATTCACTAATCACATTTCAGCTAGGGTATAGTCACCAAGTGTTAAACCAACCTCCAACAATA ATTGAAGATAATGGGCTGATGTAACCAGATTTATATAGTATGCTTGCATTGTATCAGCTTATGAACTCCAAATGATGTAA CCAGATTTATATAGTATGCTTGCATTGTTCCACTTCTGTTTGTTTCTTTTAATATTGATCATGTTTAAAGAAAAGTTGAT CTAAACATCCTCAACATACTTGATAATCTGTCTTGGTACATATCTCTTGCTGATTGCATGAATATTCAGTTATAAAGCTC ATCAATTGGTACTTTTACAATTATCTGATTAGTATTATTTTTTAATAGATGGCTAAGAGGAAGAGCCAAGGGCGCAGGAA ATCACATGTTGCTGGGAGCTCCCATGATGCCACGGAGGATGTTGAGGATCGCCACACAGCCCCGGATGATGTTGAGGATC GCCACAGACGGCTGCATGCTTCTTTTCGTAGAGTCAGAGGCAGATTTGGTGAGGACCAGGATGTTGGTGGGACATCAAAT GAGGAGCGTCGAGACCCTTGTGAGATGATTCCTGAGCCTTCTCCGCCTTCTCCGCCTTCTCGTCAGACGACTCCCGAGCC TTCTCCGCCTTCTCGTCAGATGACTCCTCAGAGTTCGACAGAGAGTGAGCATGAGGTTGATGTGGAGCATGAGGTTGATG TGGAGCTTCAGGTTGATGTGGAG
CDS sequence (LotjaGi5g1v0316800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGAAGAAGAAGAAGGAGGGAACAGATTCCGATGTCGAACCAGAACTCAACGCCGCCAACAATGGCAACATCGA CGACTCTCACCACAAGAAGAAGCATAAGAAGAAGAAGAAGATGAAGAAGACAAACCAGTTACCCACAGTCAGCATAGCTG TTCCTGGTTCCATCATTGACAACGTCCCAACCCTCGAGCTCGCTACCCGGTTGGCTGGTCAAATCGCTCGTGCTGCAACG ATTTTTCGAATCAATGAGGTGGTTGTGTTTGATAATAGTGGTAACCTGGATGAAGATACCATGCTGGATAATGCAGATGA TGAAAGTGGTGCTGCTTTTCTCATCCGAATTTTGAAGTATCTTGAGACACCTCAGTATTTGAGGAAGGCTCTCTTCCCAA TGCATAACAGTCTAAGATTTGTGGGACTGTTGCCGCCCCTTGATGCACCGCACCATCTGCGCAAACATGAATGGGGTTCG TATAGGGAAGGTGTTACGATAAGACAAAGAGATTCAAACTCTGCGGCAACACTAGTTGATGTTGGTTTAGCTAAGAATGT TGTAGTCGACCAAATACTTGAACCAGGAAGAAGAGTTACTGTCGCCATGGGTGCCAACCGCAATTTGGATTCTGATTTGC CACGTCAAGTTGTCTCATCATTGAAGCCTAGGGAAGACGGAACATATTGGGGATATCAAGTTCGTTATGCGCATAATATT AGCTCAGTATGTAAGGATTCTACATTCGAGGGTGGCTATGATTATATAATCGGTACCTCTGAGCATGGTCAGATTATCAA GTCATCTGATCTTGAATTACCTTCTTTTAGGCATTTATTGATTACCTTTGGTGGACTGGCTGGGTTGGAAGAGAGTATTG AAGAAGATGATAACTTGAAGGGTAAAAAGGCACAGGACGCTTTTAATTTGTATTTAAATACATGTCCAAATCAGGGTAGC CGAACAATTCGGACAGAGGAAGCTATTTTTATCTCTCTTCAGTATTTCCAAGAACCAATCAGCAGAGCATTGCAGGGTTG A
Protein sequence (LotjaGi5g1v0316800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKKKKKEGTDSDVEPELNAANNGNIDDSHHKKKHKKKKKMKKTNQLPTVSIAVPGSIIDNVPTLELATRLAGQIARAAT IFRINEVVVFDNSGNLDEDTMLDNADDESGAAFLIRILKYLETPQYLRKALFPMHNSLRFVGLLPPLDAPHHLRKHEWGS YREGVTIRQRDSNSAATLVDVGLAKNVVVDQILEPGRRVTVAMGANRNLDSDLPRQVVSSLKPREDGTYWGYQVRYAHNI SSVCKDSTFEGGYDYIIGTSEHGQIIKSSDLELPSFRHLLITFGGLAGLEESIEEDDNLKGKKAQDAFNLYLNTCPNQGS RTIRTEEAIFISLQYFQEPISRALQG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 4 | 344 | 341 | 4.3E-146 | ||
| MobiDBLite | 30 | 44 | 15 | - | – | |
| CDD | 49 | 336 | 288 | 3.92705E-72 | – | |
| Pfam | 49 | 335 | 287 | 9.7E-101 | ||
| SUPERFAMILY | 49 | 337 | 289 | 1.05E-50 | ||
| Gene3D | 50 | 334 | 285 | 1.1E-95 | ||
| SUPERFAMILY | 150 | 231 | 82 | 1.46E-13 | ||
| Gene3D | 156 | 221 | 66 | 1.1E-95 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0316800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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