Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0318800 |
| Transcript ID | LotjaGi5g1v0318800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.2 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|K7N3E1|K7N3E1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0318800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63627762..63631675) extracted from Lotus japonicus Gifu genome v1.2.
AACCCAATAGGTTTGCTTTAATTAAATCTGATTGTTAAAAATTTGCTTTAATTAATCTTTTCCACCCACCTAAACATGAA ATTATTGGACTTGAAAGTTTGCTTTAATTAATCTGCTTGAGTTAAAAGTCCTTCCTATATGGCATAATTCAATGTGATTC TGCATTTTGTCAATTTAATCACCCCTAGCCCTTCTAGATTTCAAGTGGCTGACACACTCTACATCTGGTCCAAAAATACT AGGCTCTAAAGCAACACTAGTACAAACCTTTCTCCAAATGAAGATGCCTCCTTCCAAGTACTCTGTAGTTTCTCCTGTTT TCTTCTCCCTCTTTAGCTTCCTATTCTTCCCAACAGAATCATCTCCAATCTACAGTTCTCATTGCTGCACAGACTCCATC AAGTACCAACCAAACAGCACCTTCCAAACCAACCTCAACCTCCTCCTCTCTTCCCTCTCTTCCAACGCCACCGGAGGCAG CCGTTTCCACAGAGCAGTAATCGGCAGCGAAACCTCCAACATCGTCAAAGGTCTCTTCCTCTGCCGCGGTGACACACTCG CGGCCGCCTGCCACGACTGCGTCACCGCGGCATCCAGAGACCTTAAACGCCGCTGCCCGGTTCAAAAAGAGGCCATAATC TGGTACGACGAGTGCATGGTTCGCTACTCCAATCAATCTTTCCTCAACAACATAGTTCCCGGAGTAGACCTCTCTGATAC GAAGAGCGTGGCTCCCGGAGAACTCAACCGCTTCAACGAACTCCTCGCTGGGCTGCTGAATGCTCTGGCGACGAAGGCTG CGAATTCTGTTGATGAGAAGTTTGCAACAGGGGAAGTGAACTTCACGCGCTCCGTGACGCTCTATGGATTGGTGCAGTGT ACGCCGGAGTTGTCGTTGTTTGATTGTAACATGTGCTTCAGAAGCGCCATTGCTTCTGTTCCGAATTGCTGTGATGGGAA ACAAGGAGCCAGGGTTTTGCTTCCTGGTTGCAATATCAGATATGACATCTACCCATTTTACAGTAGCAGCAATAATTCAC TGACACCACCGGTTCCTGTTGTTCAATCTCGCACTTCAGGTACAGTATTAGTCCTGACTGTGTCAAATGTCGGTTAGGTT AGTTCTGGCCCGATGTTTTATCTAAACAGGATTAACTTGACTGACATTTGACGAGATGCAGGCCCTAGGCTAACACTGAG TTTGAGCATTCATTTTTGTTTGTATTTTTTTCTTTTTGCATTCATTATGGGGTTTTTCTGATTACTGATGTTGGATCAGG ACGGACTCGTGTTGAAGTGATCCTTGCATTTGTAATACCTATTGTTGCTGCCATGGTGCTTTTCACTTTTGGCATTTGTT CTGTCATGAGAAAGCAAGCGAGAAGTATGATATTGTTATGGAGGAAAACGGTAATGAGATGAAATCATAATCTATTACTA GTAACTTGCTTAGTTAGGTGTTAGGTTGCTGATTTTTCCTTTTTGCTTGAAAAACAGGATGTTTCTGAGATATAGATGAT GAGACTGATGCATGCTGGAAACATTCAAGAATCAAGTATCAGGATAATTCACTTAATGCTGAAGACCAAGCTATGAAGAC TTGTTTCTTTTTAGTATGCTTAATTTGGAAGTGCTTAATGCGAGCAAAACTACTTGGAAGCGTTGGAAAGACTTCTGGTG CATCCCTCTTTGATTTGTTTCGTTTAGAGAGATCCTACAATCTCAGGAAAGAGGATATAGTAGTTGCTACGAGCGTACAG AATGATTTCAAATAAAAATGAAACATCCTGTTAAAAAAAAAAGGTACAGGAAATAGAAAAAAATATATATATATACATAT ATATTTAATAAAGCAAAAACTTATAATAATAATAGTTAAAAAAAAAAAAAACAATCTAACCTAACCCCATAACCCACGCA GCCCCACACCCACAATTGCTGAAACCGTAAAAAAAAAAGCAATTCTTTTCTCTCTCTGTGCTCGTTGCTTTCTTTCTTCT CCTGTGCGCAGCTTTGGTTCTTTTCTCTTCTCTTCAATTTTCTTTCTTCTTCAAAGGAAACAAAATACTACACAATACCC CCACCATCAAATAGACGTTGGTGAAGAGAAATTATCTTGCAAGTGGAAAAGATGTTGGGCATGGTTTTGGGAGATAGGGT TTGTGCTAAAGAATGAGAAGAGTACCCACCGCTTCACGATTACTCAGTCGGGTTATTGAGGTATATCTATCACTTATAGA TTTAAAGAATGATATTATAGTATATGTTAGACTTGAGTAGGATTATTTTAGGGGTTTGGGTACATAATTGGGGATTTCAT AGTTGCTCACGGGTAGTACGACATAAGATAATTGTTGCTGAAGGTTTGAAGTTGATTTTTGGTGTTCAGATCTGCCGGTT AGTGGTTCGTTTGGTTGTCGCGCAGTTGTGGAGAGCAATCGTGTTGGTTCTTCGTAACTGTGAGTGGTTTTCAACTGCTA TGACATATTTTTAACAGTCTTATAACTGATTTAATTACTTTATCATGTGACCTATTTATCTAAATTGGGGAAACGTGTTT TAGTATGTTTGACTATCATTCTTGAACTCTGAAAGCTGATTTTATGAAACTGATTTTGAGCATGTTTTATGAATTGGTAT GAGAAGAGAATGACATTGGGTTAATTTGGAAATTATGTGAAATTGAGATTGTGAACTTGAAAAGCTTTGATGAGCATTGA AAAGTTGATATTGAGAATGTTATTTTGAAAAGCTTTGATGAGCATTTGAAAATGATTTTGAGACTGTTGATGAGACTTGT ATTGGTTTGAGAAAACGGTTTTGGGGATCCTTGATAAAACCCCGTAGCCGTTAGCGGAGGTAACGGCCTAGGTGCACCTA GCTAGTTTGATTCCGGGAGGAGAGGGCTATCCGTTAGATGAAGCCGCCAGTGCACGGAAAGGGCTATCAACGAGATGAAG CTTCCCCCGATGAGATTGATGAGATATGACATGATTTCGGGTGGAGAGGGCTATCCGTTAGATGGAGCCGCCTCTTGGGT AAGATAATCCTTAAGAGGAAAGGGCTATCAATGAGATGTAGCTTCCCCCGATGACACGATGTGACTTGAGAAAGGAAAGG GCTATCCGCTAGATGGAGCCACCCCTATCGGAGAGGCCATCCCTTAGGAGGAGAGGGCTATCAGCGAGATGGAGTCGCCT CATGGTTCTACATGTGTGACCCTATTAATTATATTTCTGGTTTTATGTTTTTCATATCTGTGCATGATTTTAACTGTATT TATTTGAAATGGTTATTTATGAACTTTATGATTTTTGTCAAGTTCATAGTTGAAATGATTTAAACTGGTATTATTGATGA TATAAATTGTTTATACTGAGCTGAGAGCGAAAAACTCGTGCCTAGTTTGTTTCCCCTTCCTGTTCATGGTGGTTGTTGAC TGCTCACTAAGTCTTTGTGACTTACCTCATTCATTATTTCCCTTCACAGATTTTCAGGCAGCTTAGTAGCAGACTGTTGT CAGATTCAGATCATTCGACTTATTTCCTTTAGCAGGTTGTCATAGTGGTGTCTTTTATTTAATCCTGGTTATCTGCAGCT ATAGGGAGTCCTAGGTGGATTTAGATTTGGGATTGTGATTTATTGTTATATTTTAAGAGTTGGCACTTGAGTGCTCGAGT TGGTTTTATATTTCACTTAAAATACTGGTTATGGAAGAACTTATTGGCAGATGTTGTTAATTTGTAACTATTGGAATTAC AAAAGAGATTCTAGTGTTTTTATATATGTGTACAAAGATATTTTGAATAAATTGTTTGGGAAATGATTCTATGAGGAAGA GGCTTGCCAGGCTAGGGTGGTAGTCTGTGCGCCGGTCACGGCTTAGGATTTTGGGTCGTGACAAAAAATGTGCA
CDS sequence (LotjaGi5g1v0318800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATGCCTCCTTCCAAGTACTCTGTAGTTTCTCCTGTTTTCTTCTCCCTCTTTAGCTTCCTATTCTTCCCAACAGA ATCATCTCCAATCTACAGTTCTCATTGCTGCACAGACTCCATCAAGTACCAACCAAACAGCACCTTCCAAACCAACCTCA ACCTCCTCCTCTCTTCCCTCTCTTCCAACGCCACCGGAGGCAGCCGTTTCCACAGAGCAGTAATCGGCAGCGAAACCTCC AACATCGTCAAAGGTCTCTTCCTCTGCCGCGGTGACACACTCGCGGCCGCCTGCCACGACTGCGTCACCGCGGCATCCAG AGACCTTAAACGCCGCTGCCCGGTTCAAAAAGAGGCCATAATCTGGTACGACGAGTGCATGGTTCGCTACTCCAATCAAT CTTTCCTCAACAACATAGTTCCCGGAGTAGACCTCTCTGATACGAAGAGCGTGGCTCCCGGAGAACTCAACCGCTTCAAC GAACTCCTCGCTGGGCTGCTGAATGCTCTGGCGACGAAGGCTGCGAATTCTGTTGATGAGAAGTTTGCAACAGGGGAAGT GAACTTCACGCGCTCCGTGACGCTCTATGGATTGGTGCAGTGTACGCCGGAGTTGTCGTTGTTTGATTGTAACATGTGCT TCAGAAGCGCCATTGCTTCTGTTCCGAATTGCTGTGATGGGAAACAAGGAGCCAGGGTTTTGCTTCCTGGTTGCAATATC AGATATGACATCTACCCATTTTACAGTAGCAGCAATAATTCACTGACACCACCGGTTCCTGTTGTTCAATCTCGCACTTC AGGACGGACTCGTGTTGAAGTGATCCTTGCATTTGTAATACCTATTGTTGCTGCCATGGTGCTTTTCACTTTTGGCATTT GTTCTGTCATGAGAAAGCAAGCGAGAAGTATGATATTGTTATGGAGGAAAACGGATGTTTCTGAGATATAG
Protein sequence (LotjaGi5g1v0318800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMPPSKYSVVSPVFFSLFSFLFFPTESSPIYSSHCCTDSIKYQPNSTFQTNLNLLLSSLSSNATGGSRFHRAVIGSETS NIVKGLFLCRGDTLAAACHDCVTAASRDLKRRCPVQKEAIIWYDECMVRYSNQSFLNNIVPGVDLSDTKSVAPGELNRFN ELLAGLLNALATKAANSVDEKFATGEVNFTRSVTLYGLVQCTPELSLFDCNMCFRSAIASVPNCCDGKQGARVLLPGCNI RYDIYPFYSSSNNSLTPPVPVVQSRTSGRTRVEVILAFVIPIVAAMVLFTFGICSVMRKQARSMILLWRKTDVSEI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 13 | 13 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 13 | 315 | 303 | 1.6E-112 | – | |
| PANTHER | 13 | 315 | 303 | 1.6E-112 | – | |
| Phobius | 14 | 24 | 11 | - | – | |
| Phobius | 25 | 28 | 4 | - | – | |
| Gene3D | 29 | 135 | 107 | 1.0E-26 | ||
| Phobius | 29 | 273 | 245 | - | – | |
| ProSiteProfiles | 31 | 135 | 105 | 19.612 | ||
| Pfam | 37 | 133 | 97 | 3.9E-22 | ||
| ProSiteProfiles | 139 | 247 | 109 | 20.3 | ||
| Gene3D | 144 | 247 | 104 | 2.8E-25 | ||
| Pfam | 157 | 244 | 88 | 1.6E-13 | ||
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 274 | 297 | 24 | - | – | |
| Phobius | 298 | 316 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0318800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…