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LotjaGi5g1v0319000.2

Overview

Field Value
Gene ID LotjaGi5g1v0319000
Transcript ID LotjaGi5g1v0319000.2
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|V7BBH0|V7BBH0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0319000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:63648843..63652029) extracted from Lotus japonicus Gifu genome v1.2.

CCCAGGGCCTCCAAAATGTCGGGACCGGCCCTGATGGTGTGGTACTTGAACCGCTCAATATTTCGACTCGTGGAAACTCA ACCTACATATTGGTTGGTCTACGAAAGAAATGTAACTGGGCAGGTGAATGAGTTCAATCAACTACTGAGTAACTTGATGA AAAATCTGAAAGACAAAGCTGCATCAGGTGACTCTCGTCGCAAGTACGCCACTGATAACGTCGTGATCTCAAATTTTACA ACCGTGTATGGCTATGTGCAGTGTATGGCTGATTTGACAGGGGTTCAATGCAATGACTGCTTGGAACAAGCTATCTCTGA CATCCCAAGTTGTTGTGATGGCAAGATAGGGGGAAATGTTCTTAAACCCAGTTGTCGTCTTAGATTTGATCCCTACCGCT TCTACAATCAAACCACCATAATAGACCCTGTTCAACCTCCTTCATCGTTCACCAATAACACTTCTTCACAAGGTATTTAG TAAATATTAGAAATTTTAAATGTTTTTTTAGAAGTCTCACATTACATTGGTTAAATATATAGCTAAACAAGTATATATAA AGGGTAGAGCAACCTTCAACTCTTAAACTAGTTTTTGGGTTGAGTTAGGCCTCTCTAACTCTAACATGAGATACAAGAGA ATTTTTTTTTTGAGATCTCTTGCAGGTTTTTCAGCGTACACCAATTGTTCGGGTGGTGTGCTGGTACACTGTTTGACAAT GTGAAATTGAGTTTGTAACTAAAAAAAATGACGGTAAAATTGTGAACAGCTGACAAATAGCTACGAATTCTAATTTGGTG CAGGAAAGAGCAACAAAGCAAGAACTGTCATCGATCGCCATAACAGTGCCAGTTGTTATTATTGTTCTGGTGGTGCTCAG TTTTATTTGCATCTGTTCAATACTCAGAAAGCGAAGAATTATGTTTCCATGTAAGTCAAGTCTAACTGCTCTAAGATTGA TTTATCGTCACTTGTTTGTTATCCACTATGCAGCATGATGACAAAACTTTTAATATTATTTCTATATTTAACAAAACATT AGTTATTTCCTTTTGGTTTCATATTAGTTTAGAAATTATATATATCTCTAAATTGTTCTGTTTCTAGTGCATTTATCTTA TCTCTGACTAGTTTAACCCGATTTCACATGTGAAAGTTAAAAACGGACAAGATCATGATGAAGATGAAATCACTATTGCT GAGTCATTGAAATTCAATTTTGACACCATACGAGTTGCTACTAATGACTTCTCTGATTCTAATAAACTTGGAGAAGGCGG ATTTGGAGCTGTTTACTGGGTAAGATAACAATTGTTTCATTCATAAAAATGTCAACTCCTATTCAAATTTATACCATTAT AACTTGGCCAATAAAGAATTCATAGCCCATACCAGTGTTATATTTTCAGGGTGAGTTATCGAATGGGCAAGTTATTGCTG TCAAAAGGTTATCATGGAATTCTAACCAAGGAGATACAGAATTTAAAAATGAAGTGCTTTTAGTGGCCAAACTTCAACAC CGCAATTTAGTTAGGCTACTTGGTTTCAGTATGGAAGGGAGAGAAAGACTACTTGTCTATGAATTTGTTCCTAATAAAAG CCTTGACTACTTCATATTTGGTAGGTCTCAAGATCAACACAAAATGATTGTTACTGTATTGCTTACAGTTCAGGTTCAAG AAAAAGACTAATTAAGTACTAATTAACATAGTTCTAAAATTCATATGCCTTTGTTGTATATATGTAGATCCTATCAGGAA AGCGCAACTGGTTGGTGAAATGCGCTATAACATCATTAGGGGTATTGCTCGAGGCCTTCTTTACCTGCATGAAGATTCTC GACTGCGCATAATTCACCGTGATCTAAAAGCAAGCAATATTCTCTTGGATGAAGAGATGAATCCTAAGATAGCAGATTTT GGCATGGCAAGATTGTTTGTTATGGATCAAACTCAAGAAAATACAAGTAGAATCGTCGGAACCTAGTAAGTAAAGCAATG TGCTTGAGTATGCTAATTGTTATTTAAGAGCTTAATTTGAATTGAGTTAATTTTTTGCATTGTTACTCAATCATGTATTG ATAAACTAGACAAAGACTTTGATGCTTTAAGTAGTTGTTATGAGAGTCAAACTCTTTTAAAACTGGCTTAATGTAAAAGT GGTAGTAATACTTTAACCCTGATATGAAATCATAACTAGAACTTTGTTATATATAAATACCATTGACCATACATATCAAC TGAAATGATGAAGATTTTACTACTGTGAAAGGAGATATGATTTTTGTTAACTAATTAAGCACGTTCATATTCGCACGCAG TGGATATATGGCGCCTGAGTATGCAATGCATGGACATTTTTCAATGAAATCTGATGTCTTCAGTTTTGGAGTAATAGTCC TTGAAATTGTAAGTGGCCTGAAAAACAATAAGGGCATTAATCATGGTGAGGATGTGGAATATCTACTGAGCTTTGTAAGT CTTATATTTCTCATTATTATTACTTTCTTGCCATTAAAAGCTATTAAAAGATTACATGCTCCTAAACATTATTGTAGAAG TTGACTCAGTGGCCCAACAGTACCTGGTTATCTAAAATTTAGCAAATTCTTACAGGCATGGAGAAACTGGAGGGAGGGGA CTGCTACAAAAGTTATAGATCCATCATTAAACAACATTTCACCAAATGAGATGATGAGATGTATCCACATCGGTTTACTC TGTGTTCAAGAAAATTCAGCTAATAGACCAACCATGTCTAACGTTGTACTGATGCTTAATAGTAATTCTGTAACTCTCCC AGTACCTTCAAAACCTGCATTTTTCATGGACAATTCAACTAGAATCCTTACAGACATGCAGTTGTTGGAAGATAACTCAC GGGCAACAAGATCAAGTCAATCCACGAGTAAATCAGCTCAAGGATCTGTAAATGACGTTTCAATTACTGAGTTATCCGCT CGCTAGATTCTAGTCATAGGAGGGTGATATCATAATTTATCATCGATGTTTTTATCACTACTCCATGCCTTACAACCTGT AATTGTAATTTGCAAGTACTCTAGTTTACATAGGCCATAAATCGTATTTGTATACACCTGGATAAAATCTGTAATATAAA ACTTTATAGGTATTGAAGTGTATGGTTTGACTATTATTCTATTAGTGCGACTTGGTATTCTTTCCAC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0319000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTCCATTTAAAAACGGACAAGATCATGATGAAGATGAAATCACTATTGCTGAGTCATTGAAATTCAATTTTGACAC CATACGAGTTGCTACTAATGACTTCTCTGATTCTAATAAACTTGGAGAAGGCGGATTTGGAGCTGTTTACTGGGGTGAGT TATCGAATGGGCAAGTTATTGCTGTCAAAAGGTTATCATGGAATTCTAACCAAGGAGATACAGAATTTAAAAATGAAGTG CTTTTAGTGGCCAAACTTCAACACCGCAATTTAGTTAGGCTACTTGGTTTCAGTATGGAAGGGAGAGAAAGACTACTTGT CTATGAATTTGTTCCTAATAAAAGCCTTGACTACTTCATATTTGATCCTATCAGGAAAGCGCAACTGGTTGGTGAAATGC GCTATAACATCATTAGGGGTATTGCTCGAGGCCTTCTTTACCTGCATGAAGATTCTCGACTGCGCATAATTCACCGTGAT CTAAAAGCAAGCAATATTCTCTTGGATGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGATTGTTTGTTAT GGATCAAACTCAAGAAAATACAAGTAGAATCGTCGGAACCTATGGATATATGGCGCCTGAGTATGCAATGCATGGACATT TTTCAATGAAATCTGATGTCTTCAGTTTTGGAGTAATAGTCCTTGAAATTGTAAGTGGCCTGAAAAACAATAAGGGCATT AATCATGGTGAGGATGTGGAATATCTACTGAGCTTTGCATGGAGAAACTGGAGGGAGGGGACTGCTACAAAAGTTATAGA TCCATCATTAAACAACATTTCACCAAATGAGATGATGAGATGTATCCACATCGGTTTACTCTGTGTTCAAGAAAATTCAG CTAATAGACCAACCATGTCTAACGTTGTACTGATGCTTAATAGTAATTCTGTAACTCTCCCAGTACCTTCAAAACCTGCA TTTTTCATGGACAATTCAACTAGAATCCTTACAGACATGCAGTTGTTGGAAGATAACTCACGGGCAACAAGATCAAGTCA ATCCACGAGTAAATCAGCTCAAGGATCTGTAAATGACGTTTCAATTACTGAGTTATCCGCTCGCTAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0319000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFPFKNGQDHDEDEITIAESLKFNFDTIRVATNDFSDSNKLGEGGFGAVYWGELSNGQVIAVKRLSWNSNQGDTEFKNEV LLVAKLQHRNLVRLLGFSMEGRERLLVYEFVPNKSLDYFIFDPIRKAQLVGEMRYNIIRGIARGLLYLHEDSRLRIIHRD LKASNILLDEEMNPKIADFGMARLFVMDQTQENTSRIVGTYGYMAPEYAMHGHFSMKSDVFSFGVIVLEIVSGLKNNKGI NHGEDVEYLLSFAWRNWREGTATKVIDPSLNNISPNEMMRCIHIGLLCVQENSANRPTMSNVVLMLNSNSVTLPVPSKPA FFMDNSTRILTDMQLLEDNSRATRSSQSTSKSAQGSVNDVSITELSAR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
4 110 107 6.8E-36 –
PANTHER
PTHR27006:SF207
16 342 327 6.7E-140 –
PANTHER
PTHR27006
16 342 327 6.7E-140 –
SUPERFAMILY
SSF56112
21 336 316 3.24E-80
IPR011009
ProSiteProfiles
PS50011
35 313 279 37.078
IPR000719
SMART
SM00220
35 306 272 1.9E-25
IPR000719
Pfam
PF00069
36 302 267 4.6E-45
IPR000719
CDD
cd14066
41 307 267 1.59289E-93 –
ProSitePatterns
PS00107
41 63 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
111 313 203 1.9E-57 –
ProSitePatterns
PS00108
156 168 13 -
IPR008271
MobiDBLite
mobidb-lite
339 368 30 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0319000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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