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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0320400 |
| Transcript ID | LotjaGi5g1v0320400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanine nucleotide-binding protein subunit beta-like protein; TAIR: AT1G40087.1 Plant transposase (Ptta/En/Spm family); Swiss-Prot: sp|Q5XI57|TTL10_RAT Protein polyglycylase TTLL10; TrEMBL-Plants: tr|I3SJY9|I3SJY9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0320400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63787477..63792076) extracted from Lotus japonicus Gifu genome v1.2.
CAATTTCACACAAATTTGGCCCAAACCTAAGATTTCACTTTCCCTCTCCCAATTTTACTTTCCCTCACTTATTTTAATTT CCCCAATTTTACTTTCCCTCTTGTTAAAAAAAAAAAAGAAACTACCGATCCCTAAAACCCCAATTTTACAATTTCACGTT CTGTTCTTCTTTGTTCCCTTGCTTCAGCGTCTGCAGCGTAGGGTTCTTCAGCGTCTTCTCCTTTCCTCTCTTCTCTTCTC CTTTCCACTCCTCTCCTCTCTTGTGTCTGGTTTCACTATTTTACAATCCTTAATTTTGATTTCTTCGTGTTTGTTCAGGT TGATGTTCATCTCCTCTCTCACTACTGGAATTGGAACGTCTTTCTTGTGTTCGTATTTTATTATCCCTAGGTATTAACTC CAATACTTCCTTTCTAAATTTAGAAATACATGAAATCTGCCAATGAACTATTTTAAAAAATTGATAAGTTCTGTGTGTCC AGTGTGTACATGCTCCACCTATTTTTATTGTTGGAAACAAATCTATAACAGACTCAGAGTTGTTTCCTATTTGTACACAG GTTTTTGAGATTACATCCTTTCGTTATTATGTTGATTGAAAATGGTACCACTTTGTTTCCTTAACATATATTTTACTAGG TGAGCAAGCATATGCTGATAAGTTAATTTAATCAATGAATCAGTGATAACCATCATGTATACACCAGGCGCTTATTAAAA AAATAATGTATACACCAGGTTATGAAATTACTGGGAACATCTTAAGAAATTTAATGATTTTTCTTTTACTGTATTTATGC GTTGGTTTGTATTTAGAAGGCATCTAAATACACCACTTGGTGCTAGTTTATATACATCTGGATATATATTTGACTATCCA AGTATTTGCTACCATGTTATATGTATTGTTAAAGAGTCAATTGTCTAAATGCTTATGCTGTTTGCTGAAGGCCCAACAAT GGTGTCATCCCTAACCTTTGAAGTGTGATTAAGGGATACAAGGATCAACTTTTAGATGTCTTTGTTAAGAAGGCTTGAAA TTATGTATGCTAGTGAACCAACAATCCAAAAAACATGTTATATTTACTGTTAAAGAACCAATTATCTAAATGCTTATGCT GTTTGCTGAAGGCCCATGAATGAGGTCATCCCTAACCTTTGAAGTTTGGATAAGGGATACAAGGACCAACTTTTAGACAT CTTTGTCAAGAAGGGCTTGAAACTATGTATGCTTGTGCTCTCTTTTTACTAGTTTAGTTCGTTTGGCTCTTTTTTACTAG TTAGTTGTTTTAATAGGTAGATTTCTTCCACTTCTTTTAGCCTATTATGTTTCTTATTCTGTTATGTATGTTCCTTTGTT GCTTTATCTCACTTGAGAGAGGTTGTTCTCAAGAACTCTTTTATTCTTGTACTTGGACCTTGGTATCCAGAAATAGATTC ACCATTCCATGGCTCTGATCTGACTCAATAGAACCTAATCTAGCCCTAGTAACATTTATATTCCGAGTTCTGAAGACTTA TAAAACTGCCCTATCATTCAACAGTCCTATTGGATATTCTTAGTTATTATACATTGACATAAAACTGCCCTATCATCGCC AGTTTGCCACAAATATAACCTAACAACTCTAGAATCTATCATGCAACCTCAACACTATTCTTGAAGGAAAAGAAGTACAC TACACCTACAAAGCCAGCCTAGCAATCGAAAAAAGTACACATTATTTCAAACTATGTTAATGGATTACTCTGCTATTTAT TTCCCATTACTTTATCCAATCCAAGTTAGTCCTACCAAACTTAAAGCCCAACCAAAAACATAAACTAGTTGCTGTGAAAT AAAATTTGACAGCTGATTTGTTAAACTATCAAGAACATGTTTACATAACTGCTTGAAATAAATAGCAGAAATGCAAAAGA GAGGTAGAGGGGTACTCAGAGATAGAGAGAGAGAAATAACAAATTATGCAGCAGGGAAGATACATTAATATACACCAATG CATGTGTGTAAATTAACATAAATAATTTACTAACTGGTTTTTTGTTATTTGAAGAACCAACCGCCCCAGTTGCACATGCA TCCTTTATAGGCAATGCTTTTGTCTCCAAAGGTTGTTTTGCTGTAGCAGCAATTAGCAATAGTAACAAAACCATGTCAGA TGCTAAGAAAAAGAAGAACTAGAAGACATCATTAGAGCAACAAGGAGATCTGATAGCATGTGTGGACCTTATTGGTATGC GATTCATTTCTTAACACTTTCTGACTATGCAATATTTTCATTACCTTATATTTTGTCACAAATAAAATTGTTCATATTTT ACTTGCAGATGATGAGGGGGCTATTACGGTTCATAGTTTACTATGCGATGATTTGAAGTTTGATCTTCCAGGAGGTAGGA AAATTGTTGTACAATGGGATGAGCTTGGTCGACCTGTTGGAAATGGTGCTGGAGTTTTGGGAGTATTTTTAGGGGTACTT GCATCTTGTGCTTCTAAATTGCCAATCACCTATGAGAGATGGCCAAAAGTTGCTGCAATACACAAGAATCAGGTTTGGGC TACTATAAAGCTATGAATCATAATAAATTATAATTTTTGCTTATTGACATTATCTAATACACTTTACTAAATGAATTTAT TTTTGTAGGAAAAATTTCAAGTCAATGAGGATGGACATAAAAAAGTCATAATGGAAAGTCTTGGGAAGAAATGGAGGGAT AATCGTAGTAGAATGTTTGTTGAATGTTATGATGACAAACAAACTTGGGAAACAAATCTTCAGGAACGCCCAGAAGGTGT TCCGTTGGATCAATGGGTCTCTTACCTACACTATAAATTGTCTGATAAAGGGAAGGTAATATCATTAAATTGTTTTGGTT CTTAATCTCATGTTTCAGCACCTTATTTTCTCCGTGAACATGTACTGGTTTTAGTTTCTTCATAATGATATCATGTACTG GTTTTAAGATTCTTGATATTTGCTACTGTCAATGAAGAAGGCAGCCAATTTTCTTTGTGGTGGAAGACAACTAACATTAT TATTATTTTGTCAATGTAGTCTTATTCTGAGAAGAACACTGCTAACCGACGCAAGCAGAAGATCCCTCATACACTCGGGT CTAAATCTATTGCAAGGAAACAATATGAGTTGGTATAGTCTGTTTACAATTTTTTACACTTGATTACTAATTTTGTACTA GTTTCATACTTTGTAATCTTAAATCTAAAGTTATTATTTCATTAGATTACTAATTTCATGCTTTGTAATAGGAATCTCAA ACTGATAGACCATATAGTAGGTTAGAAATGTACACTATTGCCCACAAGAAGAAAGATGGATCATTTGTGAACGAAGAGGC TAGACAACAGATTGTGAGTACAATGTTGTTTATGAGTTTCTATTTTAATTTACAACCTTACAAAATTCTGTTTTAACATT GTACATGTTTAATTTTTATATAGGAACAACTTGAAATGGAAGTTGATAACAATGCTTCTGAAGAAGATGCATTCATAACT GTAATTGGGAAAGAGCATCATGGATATGTACGAGGCATGGGTTTCGGTGTTTGCCCCTCTAAAGTCTTCAAAGGTTATGG GAGCACATCAACCAATGGTTCTTCTGCACAAGTTAACAAGCTTCAATTAGAATTGGAAACAGAGCGTGCCAGAGTTGATA CTTTGGTACAAGAAGTTGAAAGATTTAAAGGCTTAGAAGAAAAGCTTGCATTTGTTATGCAACAATTGGCTGGCCAAGGA TTTAATAGGGTAAGAAACTGAATTTGCAATTAATTGGCTGTTCAATAATGTGTGCAAGATAAACTAAGGCTACTTGATTA TCTTGGTTAAGACTGAGCAAGATAAATTCTGGTTATATTATAGTGGTTTACTTGTTCTGTTTTACTGGTTTTGGTTATGT TTGACTGCAGCATGCTTTTGTTTCACTTGTTGGTTGTTCAGACTTTAGATATGACAGTATGGAGACTATTTCCTTACTAA GGCTGAGATATTTTAGGGTGATTGTATTAATTGCTTGGTGGGCTAAGGCCATTGTAAAGATAGTATATTCTGAGATGGCT AGCTAGTACCATCCTTGTTTTTTCTCTCATTGTTATTTGGTTTGTAGTACACCTAGTACTTCTCTATTATATATATTTTT GCCATTGTGCATTTAGCTGAATATTAATAAAAATTAACTACTTGCAGGTTACTGATTCAGGCTCTCCAAACGAACCAAGG CCATCTTCGTCCGCTAGTCATAATCCCGGAAACAATGGACCGTCTTCTTAGCTTCATGTAGGATTGGGGGAATGATTTAA GACTGAGCTTTTTTTGAATTATTCTACTGAACTTGTCACTTTAGTAGTTGGATCTAGTGTTTCTTATGCTGATGTTAATG TTGGACCATTTACATGTTTGTACTGAATTTAACATTTTAGTAGTTGGATTTATGTTGAATGCAAATGAATGAACTTATTT TTACCTATTTGTTTTTCACATGTACAAGTTATAATAATTTTAACAGAATCAGGGTCGATCTAGAAAACAGGTATGATGGT AGTAAATTTCATTTTTTATAAAAAACAAAAAAAAAAGCAA
CDS sequence (LotjaGi5g1v0320400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGTCTTGGGAAGAAATGGAGGGATAATCGTAGTAGAATGTTTGTTGAATGTTATGATGACAAACAAACTTGGGA AACAAATCTTCAGGAACGCCCAGAAGGTGTTCCGTTGGATCAATGGGTCTCTTACCTACACTATAAATTGTCTGATAAAG GGAAGTCTTATTCTGAGAAGAACACTGCTAACCGACGCAAGCAGAAGATCCCTCATACACTCGGGTCTAAATCTATTGCA AGGAAACAATATGAGTTGGAATCTCAAACTGATAGACCATATAGTAGGTTAGAAATGTACACTATTGCCCACAAGAAGAA AGATGGATCATTTGTGAACGAAGAGGCTAGACAACAGATTGAACAACTTGAAATGGAAGTTGATAACAATGCTTCTGAAG AAGATGCATTCATAACTGTAATTGGGAAAGAGCATCATGGATATGTACGAGGCATGGGTTTCGGTGTTTGCCCCTCTAAA GTCTTCAAAGGTTATGGGAGCACATCAACCAATGGTTCTTCTGCACAAGTTAACAAGCTTCAATTAGAATTGGAAACAGA GCGTGCCAGAGTTGATACTTTGGTACAAGAAGTTGAAAGATTTAAAGGCTTAGAAGAAAAGCTTGCATTTGTTATGCAAC AATTGGCTGGCCAAGGATTTAATAGGGTTACTGATTCAGGCTCTCCAAACGAACCAAGGCCATCTTCGTCCGCTAGTCAT AATCCCGGAAACAATGGACCGTCTTCTTAG
Protein sequence (LotjaGi5g1v0320400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESLGKKWRDNRSRMFVECYDDKQTWETNLQERPEGVPLDQWVSYLHYKLSDKGKSYSEKNTANRRKQKIPHTLGSKSIA RKQYELESQTDRPYSRLEMYTIAHKKKDGSFVNEEARQQIEQLEMEVDNNASEEDAFITVIGKEHHGYVRGMGFGVCPSK VFKGYGSTSTNGSSAQVNKLQLELETERARVDTLVQEVERFKGLEEKLAFVMQQLAGQGFNRVTDSGSPNEPRPSSSASH NPGNNGPSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 186 | 185 | 7.3E-46 | – | |
| PANTHER | 2 | 186 | 185 | 7.3E-46 | – | |
| Pfam | 40 | 156 | 117 | 7.5E-23 | ||
| Coils | 113 | 133 | 21 | - | – | |
| Coils | 177 | 197 | 21 | - | – | |
| MobiDBLite | 220 | 249 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0320400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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