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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0329200 |
| Transcript ID | LotjaGi5g1v0329200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kynurenine formamidase-like protein; TAIR: AT4G35220.1 Cyclase family protein; Swiss-Prot: sp|Q2S2F5|KYNB_SALRD Kynurenine formamidase; TrEMBL-Plants: tr|I3SIK3|I3SIK3_MEDTR Kynurenine formamidase-like protein; Found in the gene: LotjaGi5g1v0329200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64626777..64630279) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGTTCGGAGCATTGTTAGTGGCGGTGTGCGCCTTAACCGTCGCGGTTTGTGCGGAGGCACTGCCCGGCGACGAGAA CCTCGTCCCTCCCCGGCGGGAAGTGTACGACGGCGGGCGAATATTCGACATCAGTCACCGGTACCACCCGGACATGCCGT CATGGGAGTCTGACGACGGCATAGGGCAGTTCCTGTGGCTTCCGAAGAGCATGAAGAACGGTTCCATCGCTAACAACTCC AAGATGAAGCTCCCGACCCACACCGGCACCCACGTCGACGCCCCTGGCCACGTCTTCGACCACTACTTCGACGCCGGGTT TGATGTCGATTCACTGGACTTGCACATCCTCAATGGTAACCCTTCTCAAATCACTTCTGTTTGGAATAGCTTGGTTCAAT TTGAGTCACTCATGGTAGCTGTTTGGTTGTTGATTGATTAAGCTTGTTTTGTTTCTGTGTGAATACAGGTCCTGCTCTGC TAGTTGATGTTCCAAGAGATAGTAATCTAACTGGTATGCATCTTTTCATTCATTTCTGCTTACAAAATAAGGCTGCATTT GGGTATAGAGTTCAATTCACCTAGCTTAAACACTTCACTTATTCATAAGCTAATTTGAGAAGCGTAATTTAGTAAGGTTT AAATAGTTTATAAGTGCTTATTCATAAGTTAGTAGGGGTAGTTTATGAAAATAAGATAAAAAAAAAATAGGTTAAGAGCT ATTTTTATTAGTTAAACCAAACACTTCCATAAACATTGTACTATATGAAAGCTCAAATCAGCTAATTCCAAATGCAATTT CAGTTTTTGTTTGTTTGGCAATTAAAGTAAAGAGTGCTAGACTTTCTATTCTTAACAACAGCTGATCAAATGACAATGTT TTTTTTTTACTTTTCCAGCTGAAGCCATGAAGTCATTAAATATTCCAAGGGGTGTGAAGCGTGTGCTTTTCCGAACGTTA AATACTGACAGGTAAGGCGTGCAAGTTAAAATGATTGATGGGGATATTGCTCTATAGGGAGTATCACAACATTTTGTTAA TGTAAGGCCTATTCAAATAGCACTGCTGATAGTTACAAATTTAATGGATTTGAAGAAACAGCTTTGCAATGCATTTATTG ACATTCCTGAAGCTACTGCATATGTTTATCTAAAATATGTTTTTGAAGTATTGGCAGCATTAAATTTCAATGCAAGGGAA CAGATTACTTTTATATATATATACTTCTTCAGTCTTTGAATGATTCTTCTCAACACTTTGTCAGCTATTGTTGGCCCTGT ATGTGTGAGACTGATTGTAGTAAGCTAGTTATAGTTTTACTCATTGTACTTGTATCAATGGTTATATTCAAAGCCGAGGT GGATGTTAAGCTAAGGAAGTATTTAGTAATGATTTATGAGTTCTGATAACTATTGATCATGTAGACATTGCTATTGCTAT CCACATGAATGGTTGAGCAGATTTGACGTCAATGACCTAGCTTTAATATCATTTTCAATTTTTCATTGTTTTTGAACTTC ATGGCACGTTTAAAGCCAAATGAGAAACTAAAATTTGTTAAACTTTTAGGCGGCTTATGTTTAAGAAGGAATGGGACACA AGCTATGTGGGATTCACGAAGGATGGAGCAAAATGGCTAGTGGAGAACACTGATATCAAGCTTGTTGGTAGGCGTAAATT GTTTTTCTACATTCTGGACTGTTTTTTTTTTCCCATGGCATCCTTTCAGTCATTTGTCCTCGTCTAGTGGCTGGTTCTAG TTTTGCACTTGTAGACTGCTACACTTTAAGATTTTTGCTTTGACTTCAGTCTTCGTTGGTGTCTCACACATGTCATGCAA TATAACTAGATAAAGAGAAATATTTGGTACAGTTTTTGCTTTTTAATTAGTTGAATAGCTATAAAAAAATTATTAACTAA GATCAGGCCGCATAATTGAGTAGTTGTTGAAAGTTAGTGATCTGGAGTCTAGACATGATGTGAACTCATCTTTTTGGTGC CTCTATCTGTTACATTATTTTCCACTTGAAGCATAGCATTGTAATTAGTTTGTACTATAAAACTTTGAAGTGTCTGCCTA AACCTTAACAGCTTGACTGGGTGTTTCACCATTTCATTTGCTGATGGTATTGATATAAGACAATAATGGACAGTAGAGTA GTTTCAGAGGATCACTTTGAATCTTGATCTCCATCCCCTTTAAGGTCTAAGTCACTATGGTGCTCTAATTTTTGCATATT TAGTGTATGTTTTGCAGAGACACACCACCCCCTTTATTTCTTGTTCAACTCTTCACATTCTTTTCTTTTCTGCTCAATCA TATTGCCTTACATATGTTTCTGTGCTGCAATGCAGGAATTGATTACCTATCTGTTGCTGCTTTTGATGACTTGATTCCAT CTCACCTTGTTTTTTTAAAAGACAGGGTAAGAAAAAAAGTATTTTATGATTGATACTTGATGTTGTTGAGAAGTTCCACG TTGACTAGAGATATGGCCTAGATAGCCCTTATATATGAGAAGGCAATCCTTACCTCTGAGCTAGCTTTTGGGTTGAGTTA GGTCTCCCATATTCTAATAGATGTGTTGTCAGTTTTAGTTAACCAATTATACCCTACCCTTTTTCATGGGTTAAAGTATA TTACTTGTCCGTAAACGGATGTTTAACTTTACAAGTACCACTAAAATGATTTTCAATCTCTTCATCATTCATTGTGGTTG CCTGGTAATTATATACAGAACTGGGAACTTTGGTTTTTATTACCTGTGATCTTTGTAACTTTGAACAACCACTTGGTGTT TCCACTCTAGATAGATATAGATACTAGATACCATGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCA CTCTCACTCTCACACACACACACACGTTTTAACTATAATATCCACTTGTCCAACTGATAACTGGTAAGTATTTAGTTCTG TCAGCAGACCTCTTGAACATTTTTGGAAGTTTTTAAAACTGGGTGAGCAGCTTGTTGCTGGTCTATTTGCCGTAGTCCTA CCTCTGTCTATGAGCCCGTTTGGATACGGACTTATCGGAGCTTATCTAATAGAAAAAGCAAGATAACCTCCGATAAGTGC TCTTTAGTTTGCATCCAAAAAGGTTCTATATCTATCCAAATTTGTGGTTGATTTGGTGGCTTCTTCAAATAAAATATTTA ACTTCATAGTTTTAAAGATAATTGCCAATTAGTTGGTACTTGGTGGAGTTTGAAATGAGACTGCTAGTTGTCTTCAGATT TCCTTGTATAAACAAGGATTGAATAAGTTTAATCTTCTGTTTGAATAAGAAACAGTATCGACATGACATGAACTAACAAC TCCAATTACTTCAGGAAATCATTCTTGTTGAAGCCCTCAAGCTTGATGATGTCCCAGCAGGATTATATTCAGTCCATTGC TTGCCTCTTAGATTGGCTGGTGCTGAGGGATCACCAATCCGATGCATTCTGATTAAGAATTAG
CDS sequence (LotjaGi5g1v0329200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTCGGAGCATTGTTAGTGGCGGTGTGCGCCTTAACCGTCGCGGTTTGTGCGGAGGCACTGCCCGGCGACGAGAA CCTCGTCCCTCCCCGGCGGGAAGTGTACGACGGCGGGCGAATATTCGACATCAGTCACCGGTACCACCCGGACATGCCGT CATGGGAGTCTGACGACGGCATAGGGCAGTTCCTGTGGCTTCCGAAGAGCATGAAGAACGGTTCCATCGCTAACAACTCC AAGATGAAGCTCCCGACCCACACCGGCACCCACGTCGACGCCCCTGGCCACGTCTTCGACCACTACTTCGACGCCGGGTT TGATGTCGATTCACTGGACTTGCACATCCTCAATGGTCCTGCTCTGCTAGTTGATGTTCCAAGAGATAGTAATCTAACTG CTGAAGCCATGAAGTCATTAAATATTCCAAGGGGTGTGAAGCGTGTGCTTTTCCGAACGTTAAATACTGACAGGCGGCTT ATGTTTAAGAAGGAATGGGACACAAGCTATGTGGGATTCACGAAGGATGGAGCAAAATGGCTAGTGGAGAACACTGATAT CAAGCTTCATAGAATTGATTACCTATCTGTTGCTGCTTTTGATGACTTGATTCCATCTCACCTTGTTTTTTTAAAAGACA GGGAAATCATTCTTGTTGAAGCCCTCAAGCTTGATGATGTCCCAGCAGGATTATATTCAGTCCATTGCTTGCCTCTTAGA TTGGCTGGTGCTGAGGGATCACCAATCCGATGCATTCTGATTAAGAATTAG
Protein sequence (LotjaGi5g1v0329200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFGALLVAVCALTVAVCAEALPGDENLVPPRREVYDGGRIFDISHRYHPDMPSWESDDGIGQFLWLPKSMKNGSIANNS KMKLPTHTGTHVDAPGHVFDHYFDAGFDVDSLDLHILNGPALLVDVPRDSNLTAEAMKSLNIPRGVKRVLFRTLNTDRRL MFKKEWDTSYVGFTKDGAKWLVENTDIKLHRIDYLSVAAFDDLIPSHLVFLKDREIILVEALKLDDVPAGLYSVHCLPLR LAGAEGSPIRCILIKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 256 | 237 | - | – | |
| PANTHER | 24 | 255 | 232 | 2.8E-132 | – | |
| PANTHER | 24 | 255 | 232 | 2.8E-132 | – | |
| Gene3D | 36 | 256 | 221 | 8.4E-53 | ||
| SUPERFAMILY | 39 | 254 | 216 | 1.96E-52 | ||
| Pfam | 43 | 197 | 155 | 2.3E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Arylformamidase activity | Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine. | ||
| Biological process | Tryptophan catabolic process to kynurenine | The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine. |
Expression pattern of LotjaGi5g1v0329200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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