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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0335800 |
| Transcript ID | LotjaGi5g1v0335800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Octicosapeptide/phox/Bem1p family protein; TAIR: AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein; Swiss-Prot: sp|Q8ILR9|YPF17_PLAF7 Protein PF14_0175; TrEMBL-Plants: tr|A0A072VQ77|A0A072VQ77_MEDTR Octicosapeptide/phox/Bem1p family protein; Found in the gene: LotjaGi5g1v0335800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65292772..65296141) extracted from Lotus japonicus Gifu genome v1.2.
TACTATAAGAGCATTAAATAGCAAGAATTAGTCCCTCTTTTTATATTTTGCGCAGCAGCACACAATAATCCACCACCAAC CTCTTTCGTAACCACCATGGAGGCGCCGCCGCAACCTCCAACACCTTCCGCTGCTCCGCCGCTATCATCAGTTGCTCCGC CGCCTCAACCACCGCCTCATCTCAATTACGCTGACTCCGTGGACTCCTCCCCCCGCTCTCGCAACACCGACTCATGGGAC GACCCCTTCCCTCCGACGTCAAAGCTCCGTCTCATGTGCAGCTACGGCGGCCACATCGTCCCCCGCCCTCACGACAAGTC TCTCTGCTACGTCGGCGGCGATACCCGCATAGTGGTTGTTGAACGCGCCACCTCACTCGCTGACATCTCCACGCGCCTCT CCAAAACGTTCCTCGACGGAAGACCCTTCACTCTGAAGTACCAGCTTCCGAACGAAGACCTCGATTCTCTCATCTCCGTC ACCACCGACGAGGACCTCGAGAATATGATCGATGAGTACGATCGAACCACCACCACCACCGCGTCCTCCATCAAACCCTC GCGAATTCGCCTCTTTCTGTTTCCGACGAAGCCTGAGTCCGCTCACTCTATCCCGCCGCAAATCCTCGATTCGTCGGCGA AGTCCGACGACTGGTTCCTCGACGCGCTTAACGGCGCTGGATTGCTCAACCGTGGATTCTCCGATTCCGCTTCTGTTAAC TGCCTTTTGGGACTCGACGACGTCGTCGCCGGAAACAACAACAACATCGAGCAAGGTGGTAGGGAAGGTGTGGAGGCTGG TGGTGGTGGTGGTGGTGGTGCTTCGCTGCCTGGATCTTTTGCGAATTGCAAGAATTCGAAGCAGGATGTTTCGTCTGTGC CGGATTCGCCTATGCTGGAGACTTCATCGTCTTTTGGGTCTACTTCCTCGTCGCCGGCGCTGGCCAATTTGCCGCCGATT CGGACCCATGCTGAGGACGGTGGTGGTGGTGGGGTTAGGGTGCAGCAGCAGGATCAGAAGGTGCTGGGGATTGAGGAGCA GTTTGCTCAGTTGGGTGTTGCTGCTGGTGTTGGTGTTGGACAGAAGCAGGATGAGGGGTTTGTTGTGATCACTTCTCCTC CGCCGCCTCCTGTGCCGACGACTCTCTCCGCCCCGGCTATGGGTGTGCCGATCAATTCTGCGGTGGTTTCCGGTGATTAC CAGAACCGGGTCTTCTCCGATGATGAGAGATCGGATCATGGGGTGCCTGTGGGATATAGAAAACCACCCACACCAACACC ACAGCAACAGGCACAGCAACAATTACATACACAGACTCAGTCACAGTCACATCCTGCTCAATTTCAACAGAGGTCAAGTG GCGGCACTGATTTGCCTTCTCCTGATTCAGTTTCAAGGTATTTTCAATTCACTATCTGGTTTTGGTTTAGACTTGTTTCT AATTTCCATTTACACTAGTTCATTCAATCATTTCATTGTTATTATACAATTTGGTTTGATTATGTATGTATGGGGTGCTG AATTTTGTTTATCAGTAGTAGTTTATGAATTAGGTTCTTAGTGTTTGCTTGTTTTGATCATATGCAGTGATAGTAGTCTT GCGAATGCAATGTCGCGTCAAAAGCCTGTGATCTATCAAGAGCAAGTTCTGATTCAATCTGGAACTACAAGGGTTCCTAC TCATAGTAACCCTGTGGATCCAAAACTTAATGTGTCTGATCCACAAAGTCGGATCCAGGTGCAGCAGCATCATGAGCAAG GATATTTGTTGCAACAGCAATTTGATCAGCAACAGCATTTGTTGCAACAGCAATTCGATCAGCAACAACACCAGCAGCAA CAACACCAGCAACAACAACACCAGCAACAACAACACCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGTATATACATGG CACACAATTCATTCATCATAATCCTGCAAATGCAATTCCTGCATATTATCCTGTATATCCTTCCCAGCAACAGACTCATC CCCAGCATGCCCAAGTTTACTATGTACCTGCAAGACAAGCCCAAGCTTACAACTTGTCTATGCAGCAGGCTAATATGGGT GAATCTGGAAAACCGCAAACTCCTCCAAATCCTACTACATTGGTTCCTCAAACTGCAGCTTACAACAACCCCATGAGAAA TGCTCCTTTACCTAAAACTGAAATGACAGCAGCAGGTTACAGAACTGCAACTGGAGGTAGCCCTCAATTAGTTCAGGTTC CCGCAAATCAGCTTCAGCATCAGCAGCAATATGTGACTTACTCCCAAATCCATCATCCATCTCAGTCCATAGCCCCAAAT TCTGCTCCACCGGCTAATTATGCTTATGATTATGTGGATCCTGCTCATGCTCAAATATACTACTCTCAACCTCTGGCGCC CACAATGCCTTCACAGTATCAGACCATGACGGCTGCTGCTATGGTGCTGCCGGAAGGTTCTTCTGCTCAGCTTCCCTCTG ATGGCATGAAGCAGCAGACAAGACCCTCATAGCCATTATAATTTATAAACTAGTCCTACAAAAAAGAAACAATTTTGAAG AATTTGGTTTGCTTTTCCATTTTAAGTTTTTATGTGTAGTTCCTGTCTGTCATGTTTGGTACCTATTTGCAGTATGTTAT TTGCCATAGAAAATAAAAGAAAAAACTGTGATCATCTTTGTACTCTTTCTTTGTGTGTCATAATTTTATAGGAAAGGAAA TTGGTCCGAGGTTATTTTTATTATACTGTAAAATTTCATGTCTGAAACCTTGTATTTGTGAAGTTCAATTATCGATTCCT GAATTGGTTGTCATATATATTGGCGGGTATTGTTTCTTGCTTCTTGCTCTGGTCCTTTGTACGACCACAGCTATGAAGGA CCACAAAGTGGCTTGTGCCTAGTCATGAATTGTTAACACGTTTAGCTGGCATTTTTACCTCTTGTTTGTTTCCTATGGGA AAATCACATTTCAACTGATTGGCTACATTTTGCTGCCAATGACCAGACAAAATTGTCCTTGCCAATGTTGAGTTTGATTC TCCTTAATGAAATCTACTTCATGAATCATCACCAGCATGCCAAATTTGAAATGCATTGCCGGGAGAATGATTCTTCCCTT TTTGCTTCTCTATGATCAAGTAGGATCCTTTATTATCATTTCAAGCTGCAGAGTATGACTTCATACAAAGATCAAACAAG AAAAAGTGCAATTATCTCAGATCCATGTTTGGTTGCATGTTTGAAATTGCATTCTGACACCAAAATTATGTTCATATAAC AGGTAGTTTGTGTTAGTTTGTGTTTGAATACCAGTTGAATGTAATTTGACTTTCATTTCAATTCTTAAAGGTAAGAAAAG TTTCATTTTG
CDS sequence (LotjaGi5g1v0335800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCGCCGCCGCAACCTCCAACACCTTCCGCTGCTCCGCCGCTATCATCAGTTGCTCCGCCGCCTCAACCACCGCC TCATCTCAATTACGCTGACTCCGTGGACTCCTCCCCCCGCTCTCGCAACACCGACTCATGGGACGACCCCTTCCCTCCGA CGTCAAAGCTCCGTCTCATGTGCAGCTACGGCGGCCACATCGTCCCCCGCCCTCACGACAAGTCTCTCTGCTACGTCGGC GGCGATACCCGCATAGTGGTTGTTGAACGCGCCACCTCACTCGCTGACATCTCCACGCGCCTCTCCAAAACGTTCCTCGA CGGAAGACCCTTCACTCTGAAGTACCAGCTTCCGAACGAAGACCTCGATTCTCTCATCTCCGTCACCACCGACGAGGACC TCGAGAATATGATCGATGAGTACGATCGAACCACCACCACCACCGCGTCCTCCATCAAACCCTCGCGAATTCGCCTCTTT CTGTTTCCGACGAAGCCTGAGTCCGCTCACTCTATCCCGCCGCAAATCCTCGATTCGTCGGCGAAGTCCGACGACTGGTT CCTCGACGCGCTTAACGGCGCTGGATTGCTCAACCGTGGATTCTCCGATTCCGCTTCTGTTAACTGCCTTTTGGGACTCG ACGACGTCGTCGCCGGAAACAACAACAACATCGAGCAAGGTGGTAGGGAAGGTGTGGAGGCTGGTGGTGGTGGTGGTGGT GGTGCTTCGCTGCCTGGATCTTTTGCGAATTGCAAGAATTCGAAGCAGGATGTTTCGTCTGTGCCGGATTCGCCTATGCT GGAGACTTCATCGTCTTTTGGGTCTACTTCCTCGTCGCCGGCGCTGGCCAATTTGCCGCCGATTCGGACCCATGCTGAGG ACGGTGGTGGTGGTGGGGTTAGGGTGCAGCAGCAGGATCAGAAGGTGCTGGGGATTGAGGAGCAGTTTGCTCAGTTGGGT GTTGCTGCTGGTGTTGGTGTTGGACAGAAGCAGGATGAGGGGTTTGTTGTGATCACTTCTCCTCCGCCGCCTCCTGTGCC GACGACTCTCTCCGCCCCGGCTATGGGTGTGCCGATCAATTCTGCGGTGGTTTCCGGTGATTACCAGAACCGGGTCTTCT CCGATGATGAGAGATCGGATCATGGGGTGCCTGTGGGATATAGAAAACCACCCACACCAACACCACAGCAACAGGCACAG CAACAATTACATACACAGACTCAGTCACAGTCACATCCTGCTCAATTTCAACAGAGGTCAAGTGGCGGCACTGATTTGCC TTCTCCTGATTCAGTTTCAAGTGATAGTAGTCTTGCGAATGCAATGTCGCGTCAAAAGCCTGTGATCTATCAAGAGCAAG TTCTGATTCAATCTGGAACTACAAGGGTTCCTACTCATAGTAACCCTGTGGATCCAAAACTTAATGTGTCTGATCCACAA AGTCGGATCCAGGTGCAGCAGCATCATGAGCAAGGATATTTGTTGCAACAGCAATTTGATCAGCAACAGCATTTGTTGCA ACAGCAATTCGATCAGCAACAACACCAGCAGCAACAACACCAGCAACAACAACACCAGCAACAACAACACCAGCAACAAC AACAGCAGCAGCAGCAGCAGCAGTATATACATGGCACACAATTCATTCATCATAATCCTGCAAATGCAATTCCTGCATAT TATCCTGTATATCCTTCCCAGCAACAGACTCATCCCCAGCATGCCCAAGTTTACTATGTACCTGCAAGACAAGCCCAAGC TTACAACTTGTCTATGCAGCAGGCTAATATGGGTGAATCTGGAAAACCGCAAACTCCTCCAAATCCTACTACATTGGTTC CTCAAACTGCAGCTTACAACAACCCCATGAGAAATGCTCCTTTACCTAAAACTGAAATGACAGCAGCAGGTTACAGAACT GCAACTGGAGGTAGCCCTCAATTAGTTCAGGTTCCCGCAAATCAGCTTCAGCATCAGCAGCAATATGTGACTTACTCCCA AATCCATCATCCATCTCAGTCCATAGCCCCAAATTCTGCTCCACCGGCTAATTATGCTTATGATTATGTGGATCCTGCTC ATGCTCAAATATACTACTCTCAACCTCTGGCGCCCACAATGCCTTCACAGTATCAGACCATGACGGCTGCTGCTATGGTG CTGCCGGAAGGTTCTTCTGCTCAGCTTCCCTCTGATGGCATGAAGCAGCAGACAAGACCCTCATAG
Protein sequence (LotjaGi5g1v0335800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAPPQPPTPSAAPPLSSVAPPPQPPPHLNYADSVDSSPRSRNTDSWDDPFPPTSKLRLMCSYGGHIVPRPHDKSLCYVG GDTRIVVVERATSLADISTRLSKTFLDGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTTTTTASSIKPSRIRLF LFPTKPESAHSIPPQILDSSAKSDDWFLDALNGAGLLNRGFSDSASVNCLLGLDDVVAGNNNNIEQGGREGVEAGGGGGG GASLPGSFANCKNSKQDVSSVPDSPMLETSSSFGSTSSSPALANLPPIRTHAEDGGGGGVRVQQQDQKVLGIEEQFAQLG VAAGVGVGQKQDEGFVVITSPPPPPVPTTLSAPAMGVPINSAVVSGDYQNRVFSDDERSDHGVPVGYRKPPTPTPQQQAQ QQLHTQTQSQSHPAQFQQRSSGGTDLPSPDSVSSDSSLANAMSRQKPVIYQEQVLIQSGTTRVPTHSNPVDPKLNVSDPQ SRIQVQQHHEQGYLLQQQFDQQQHLLQQQFDQQQHQQQQHQQQQHQQQQHQQQQQQQQQQQYIHGTQFIHHNPANAIPAY YPVYPSQQQTHPQHAQVYYVPARQAQAYNLSMQQANMGESGKPQTPPNPTTLVPQTAAYNNPMRNAPLPKTEMTAAGYRT ATGGSPQLVQVPANQLQHQQQYVTYSQIHHPSQSIAPNSAPPANYAYDYVDPAHAQIYYSQPLAPTMPSQYQTMTAAAMV LPEGSSAQLPSDGMKQQTRPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PRINTS | 1 | 23 | 23 | 9.1E-5 | ||
| MobiDBLite | 1 | 51 | 51 | - | – | |
| PANTHER | 5 | 739 | 735 | 5.2E-291 | – | |
| PANTHER | 5 | 739 | 735 | 5.2E-291 | – | |
| MobiDBLite | 34 | 50 | 17 | - | – | |
| ProSiteProfiles | 56 | 164 | 109 | 12.313 | ||
| CDD | 60 | 162 | 103 | 5.49133E-48 | – | |
| SMART | 71 | 164 | 94 | 3.5E-29 | ||
| Pfam | 72 | 163 | 92 | 2.2E-17 | ||
| SUPERFAMILY | 72 | 172 | 101 | 2.65E-22 | – | |
| Gene3D | 76 | 161 | 86 | 1.8E-6 | – | |
| MobiDBLite | 227 | 283 | 57 | - | – | |
| MobiDBLite | 247 | 283 | 37 | - | – | |
| MobiDBLite | 373 | 440 | 68 | - | – | |
| MobiDBLite | 392 | 440 | 49 | - | – | |
| PRINTS | 458 | 482 | 25 | 9.1E-5 | ||
| MobiDBLite | 459 | 489 | 31 | - | – | |
| MobiDBLite | 506 | 542 | 37 | - | – | |
| Coils | 520 | 540 | 21 | - | – | |
| PRINTS | 666 | 687 | 22 | 9.1E-5 | ||
| MobiDBLite | 722 | 741 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0335800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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