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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0348300 |
| Transcript ID | LotjaGi5g1v0348300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | D-glycerate dehydrogenase/hydroxypyruvate reductase; TAIR: AT1G68010.1 hydroxypyruvate reductase; Swiss-Prot: sp|P13443|DHGY_CUCSA Glycerate dehydrogenase; TrEMBL-Plants: tr|I3S3H0|I3S3H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66425362..66430548) extracted from Lotus japonicus Gifu genome v1.2.
CAAGTATCAGCCAGAGCCACCAACAATATTATCCATTAACGAGAGGCCCAAAGTGTTACCCTGATCATCTCTTATCTGAA ATCCCATAGCCATCACCATCAAACATTGTAAGGTCAAGTTGTCACCAGTCAAAGTCTTAACCATGCATGCAGCAATGTCA TTGGTCAGAAAACTCTATGGTCCTGTGCTACGCCGCTACACCATATCATCATCACCAATCTCTTACAATAATAAAACCAG ACATCATCATTTTTCAGAGCTAGTTCACTCCATGGCGAAGCCAGTGTCCATTGAGGTGTGGAACCCAAGTGGCAAATACA GAGTTGTCAGCACTAAACCAATGCCTGGTACTCGTTGGATCAACCTTCTCATCCAGCAAGATTGTCGCCTTGAAGTAATC AACTATCTTTATCTATTATTATCATTTTTTTTCTGGTTGATGATGAAGAGAATTTGATTTTTTCAACTTTGTCTCATTTT TACTATGCTCAGATATGTACTGAGAAGAAAACAATACTGTCAGTTGAAGATATCATTGCTTTGATTGGTGAAAAGTGTGA TGGAGTTATAGGACAGGTAATTATTGATGACTTGAATTGCATGATGATGATGATGATTATGATCAATTAGCACCCACAAT GAAATAATTGATTAGAGCATCATCAAATTACAATTTGACAAACAAAATCTAGACTTTTTTTGGGTTACCATGTGGGTTTT TAGGGTGGTTTTTTTCTTGCTTGTGGTGTGTGATTGAGTTTTTAATCCTATTACAGCTGACTGAAGACTGGGGAGAAGAG TTGTTCTCTGCCTTGAGCAGGGCAGGAGGGAAAGCTTTCAGTAATATGGCTGTTGGTTACAATAATGTGGATGTCAATGC TGCAAATAAGTATGGTGTTGCTGTTGGAAATACCCCTGTAAGCTATCTCTTTCCCCCTTTCTGTTTGTAAAAATGTTTAG CAAATACTGTAGACACCCAATATTACAAGGATAAATGATAGATATGATATATGGTGTAGTGTGACAGGAAGAAAGATATA GAGAAAATTGGAGGGGGTCTATAGGAGGTGGATTGACCATTTGATTGTTCAAAAATCATGATTGTTTTATTTAACACAAT TGTGACAAACTTTACATCTTAAATTTTTCCTGTGGTTTTTCCTATTGTATATTGTAAAGTTAACATTTATGCTTGGAAGA TTTTCTTTTAGAACATAAAAGGTACTGCAAAGACTACTAGCAGTATATGCATGCTCTCAGGTTTGATGCTTAAGTGGTTT TAGTTATGTTGTGTGTGTTGTACGAGAAATAGTGATGGACTTGAATAGTCAGTATTAACTCTAACAATAGTTTCATTACT TATTTGGTAGGGAGTTCTCACAGAGACAACAGCAGAACTGGCAGCTTCACTGACTTTGGCAGCTGCGAGAAGGATAGTTG AGGCAGATGAGTTCATGAGGGCAGGATTATATGATGGATGGCTACCTCATCTGTATGAAAACTACTGCATATTCTTTTCA TTTTTTTTCTGCTATGAGTAATGTTAAATGCTATGGATATGAAAGTTTTTCTTTCTAAGAGTAGTCATATACTCACTTTT GTCTTTTGAGTACCATCATCTTCTGAAGGCTGGAATAACTGCTTTAGTTTTGTTTCTCTGGCAGATTTGTTGGAAACTTG CTCAAGGGACAAACAGTTGGTGTTATTGGAGCTGGCCGCATTGGATCAGCTTATGCAAGAATGATGGTAATTTTCCATTA AATATCTGTCTCAGATTGAATGTCTCTCCAATGTTTACTTCGTTGAGTAGAATTTGTTAAGTACTTGGTTTCTGACTACT TAGCATAAAAAGGGTCTTTGACTCTTTGTCCTTCTCAAAAGTTCTCTTAATCAGAGTTAGAGTCTTAGAGATCTAAGACA AGTTCAAATAAAATCTTAACTTGAGTCTTTCTTATATATTTCACTTTGAAAGAACATGTCAGCTGTGATTTATTTAGTTG GTGATAACTGAATATATGTGATTATCCATATGATCTTCAGATTCTTACTTTGCTGATGTAAATGACTTAAAGTTGATTAT TCATATGATGAAAGAGAAACAAAATTCTTTTTGTGCTGTATCAGGTTGAAGGGTTCAAGATGAATCTAATTTACTACGAC CTCTACCAGTCTACACGACTAGAAAAGTTTGTGACAGGCATGTTCCTACCAAGTCATATTCATAAATCAAATTACTGTGA GGTGTGAACTAATGGTTCTCTTATCCTTATTGCAGCTTATGCTGCATTCTTGAAAGCAAACGGTGAAACACCGGTGACTT GGAAAAGGGCATCAAGCATGGATGAGGTCCTCCAGGAGGCTGATATAGTAAGAAGATGATGCAGAGAATTTAATTTACTA CCCATAACTTAACAGGATTTGATTATTCCAAAATAATTCGGATTATTATGGGTGCTTTTGTAGATTAGTCTTCATCCTAT CTTGGATAAAACCACCTATCATCTAGTCAACAAGGAAAGGCTAGCTAAGATGAAGAAGGTGAGAGTTTAAGGAACAAAGT TTCACTGTAAACTATCCATGGTACCAATTGATGCAAATTGCTCTGTGGTAGTGATAATATCTCTATTACAGGAAGCAATT CTTGTGAACTGCAGTAGAGGGCCTGTTATTGACGAAGCTGCACTTGTAGAGCATTTAAGGCAGAACCCAATGTTTCGAGT AGGACTTGATGTGTTTGAGGTAATTGAACGTTCTAATTTCTTATGCAGTTTGAGTTGGTCTTGCATGCCTTCTCTGTTTA TGAAATTTCGGACTTGTCATTACAAAACGACATTTGTGAACTTTTATTAGGAAGAGCCCTACATGAAACCTGGGCTTGCA GAGTTGAAGAATGCTATTGTGGTACCTCACATTGCATCTGCTTCCAAGGTAATCCTGACCTGCACTTTATGCTAAATGTT TTCAATATTAAAAGTCTTTTATGGGTGACTCTCCTTCAAAAGTAATCAATTATTTCATATGCATGTTTTTTGCAGTGGAC CCGTGAAGGAATGGCTACACTAGCTGCTCTAAATGTGCTGGTATATCTCTATCCATCTTGTATTTTATTTTGATAGAAAT ATAAATCCATTCATGTGTCTTCTTCTAACAGTGTAAGCTTTTGGATTATTTGGTTGGTATTAACCAAATCATTTGAATTT GGATCCATATTGCCCATTATCTAATGAAAAAAGTTGAATTTAAGCACAAATGTAGATGGCTTGTGCATTGTACATGCAAG AGTCAACTGGGCCGGTGCCAGAGCTTACACTAGTGAACTCTTGCGTGAGCCGTGAGGGGGCTTGATAGAAGTCTAGTATA GAATCACTTATGTCTTCTCCTAATAACTTAAGCTTTTGGGATAGTTAACTCGTTAATATAATATAACGCCATTCATATTT CTATGATCACTGTGAATTCTCAGTGACTTGTAAAACTGATGATAATCATTGCAAAATACAGGGAAAGATTAAGGGCTACC CAGTTTGGTTTGATGCTAATAAGGTGGAACCCTTCCTTGATGAGAATGCTCAACCTCCGGCTGCAAGCCCAAGCATTGTT AACGCAAAAGCTCTGGGTAATAACATCTTAAAGGGAACTACTATTCATTCCGCGGATTTCTCTCCCAGCACGAGCCACAT GCTTCTGGTACGGAAATTAATTTCCGGAAGCATGTAATCTATAGGTGCGGGAGAGAAAGACGCGGTTTAAGTAGTAATCT CTCATCTTGAAAACTAAGGTTAAATATTGTTGTAAACCTAAACAAATTCACTAACATGTTTTCTTTCTAATGCCAGGTTT GCCAGTTTCAACTTCAAAGCTATAGGCATACTTGCTTGTATCCTACACAAGGGCCTTCAATTGCAAAAGTACCTATTTTT GTGTGTTGAGTTGGGCTCTGTTGGCATGGAAATGTGGAGTATACCTGAGCTATATGGCTAGTCCATGCTTTTGTATATGT AGAGTGCTGGTGGAAGCATGAATAATATAGTCTTTAGATACTGTCTCGTTAATATTAGCATCATGTGAATTTAATTAAAC ATGTGGTTTGAATTTTTATTCAAAATTAATGAACTTATACCTGAGGATTCATCTCAATTTACTTAGACCGCTTAAAAACA AGAGGTGAAATTTTGCCTTGTTTCATAAAAAGTCTTTTTTTTTTTAATATCTGAAAACCTGTTTGCTTCTAACATTTTCC TCCTTTTATTAGAGCTAAGCTTTCTAATTAAATTAAGCACCATAATATATTCAGCATTGTAATTATTATCATTAGTAAGG AAACATACAGTGATATGGGCAAATTGATCATTACCTTCTCTTGGCTCTTGGGAGCTTCCATCGGTAGAAGTTTGCCTTAG CTACTTCCTTTGGGCTTGACTCTGTTTGGGAAGGATGCGCACTTTATGCTCTTTGGAATAGTAAAGTGGCTAGGTTTGAG ACTGGATCTTCAATGCTTTGAATCTCTCCTCAGGTTTGGTTATGCTTTGAATCATGAGATTCTACAAACGTGGTCTCCAC TCTTCTTACCATTGGCCCTAATTTTGCATGTGAGGGGCATGTAGGAAGGAGAAGCCTTCTATTGTTTTTCACTCCAAGAG AAGTTTGGGTGATTCCTACATCTAGGATTATAAGTGTTAGGGAAAGGATGAAGGATCTCCCTAAGTCTTGTTTTGAGTTC CCACAAAGTTTATCTCATTAACAAATTTAGAAAAGAACGGTTCATATGAAAATTCTTGTTCTCATGTCAACCCCTCCCCA TACTAATCACAAACTAGTGTAAGAGATGGTTGCGTTTCAACTACACACACGCAAATAAGAATAAGTGCATTTGATTGCAA ATGTAATATACGAAAGAAGTCTTAACTATCGAACCCAACTGACGACTAACTCTTGAGATGAACTCATTGTCTAAGAATTG TTTGTTGTGATCATGCAAGTGAAATAAGAATGAAAATTAGATAAAAGAGTTCTGAGATTGCTTAGTATTCCTATCCTTGG AATTTATATATTGTACCTAAAAATCATGTATGAGCCAACTCTACTTCTCAAGTGTCAAATGCGTCGCCAAGATATACTAA ACTACTACCAAAGGACACTACCTAGTCGCGACCGTCATGCAAGTATGATTGCTTGAATAGGAGTTAA
CDS sequence (LotjaGi5g1v0348300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGCAGCAATGTCATTGGTCAGAAAACTCTATGGTCCTGTGCTACGCCGCTACACCATATCATCATCACCAATCTC TTACAATAATAAAACCAGACATCATCATTTTTCAGAGCTAGTTCACTCCATGGCGAAGCCAGTGTCCATTGAGGTGTGGA ACCCAAGTGGCAAATACAGAGTTGTCAGCACTAAACCAATGCCTGGTACTCGTTGGATCAACCTTCTCATCCAGCAAGAT TGTCGCCTTGAAATATGTACTGAGAAGAAAACAATACTGTCAGTTGAAGATATCATTGCTTTGATTGGTGAAAAGTGTGA TGGAGTTATAGGACAGCTGACTGAAGACTGGGGAGAAGAGTTGTTCTCTGCCTTGAGCAGGGCAGGAGGGAAAGCTTTCA GTAATATGGCTGTTGGTTACAATAATGTGGATGTCAATGCTGCAAATAAGTATGGTGTTGCTGTTGGAAATACCCCTGGA GTTCTCACAGAGACAACAGCAGAACTGGCAGCTTCACTGACTTTGGCAGCTGCGAGAAGGATAGTTGAGGCAGATGAGTT CATGAGGGCAGGATTATATGATGGATGGCTACCTCATCTATTTGTTGGAAACTTGCTCAAGGGACAAACAGTTGGTGTTA TTGGAGCTGGCCGCATTGGATCAGCTTATGCAAGAATGATGGTTGAAGGGTTCAAGATGAATCTAATTTACTACGACCTC TACCAGTCTACACGACTAGAAAAGTTTGTGACAGCTTATGCTGCATTCTTGAAAGCAAACGGTGAAACACCGGTGACTTG GAAAAGGGCATCAAGCATGGATGAGGTCCTCCAGGAGGCTGATATAATTAGTCTTCATCCTATCTTGGATAAAACCACCT ATCATCTAGTCAACAAGGAAAGGCTAGCTAAGATGAAGAAGGAAGCAATTCTTGTGAACTGCAGTAGAGGGCCTGTTATT GACGAAGCTGCACTTGTAGAGCATTTAAGGCAGAACCCAATGTTTCGAGTAGGACTTGATGTGTTTGAGGAAGAGCCCTA CATGAAACCTGGGCTTGCAGAGTTGAAGAATGCTATTGTGGTACCTCACATTGCATCTGCTTCCAAGTGGACCCGTGAAG GAATGGCTACACTAGCTGCTCTAAATGTGCTGGGAAAGATTAAGGGCTACCCAGTTTGGTTTGATGCTAATAAGGTGGAA CCCTTCCTTGATGAGAATGCTCAACCTCCGGCTGCAAGCCCAAGCATTGTTAACGCAAAAGCTCTGGGTTTGCCAGTTTC AACTTCAAAGCTATAG
Protein sequence (LotjaGi5g1v0348300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHAAMSLVRKLYGPVLRRYTISSSPISYNNKTRHHHFSELVHSMAKPVSIEVWNPSGKYRVVSTKPMPGTRWINLLIQQD CRLEICTEKKTILSVEDIIALIGEKCDGVIGQLTEDWGEELFSALSRAGGKAFSNMAVGYNNVDVNAANKYGVAVGNTPG VLTETTAELAASLTLAAARRIVEADEFMRAGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL YQSTRLEKFVTAYAAFLKANGETPVTWKRASSMDEVLQEADIISLHPILDKTTYHLVNKERLAKMKKEAILVNCSRGPVI DEAALVEHLRQNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPVWFDANKVE PFLDENAQPPAASPSIVNAKALGLPVSTSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 44 | 413 | 370 | 1.0E-226 | – | |
| PANTHER | 44 | 413 | 370 | 1.0E-226 | – | |
| CDD | 59 | 389 | 331 | 9.33606E-124 | – | |
| SUPERFAMILY | 60 | 199 | 140 | 2.84E-22 | – | |
| Gene3D | 64 | 389 | 326 | 7.5E-96 | – | |
| Pfam | 78 | 389 | 312 | 1.2E-17 | ||
| Gene3D | 161 | 364 | 204 | 7.5E-96 | – | |
| SUPERFAMILY | 163 | 366 | 204 | 1.47E-50 | ||
| Pfam | 172 | 365 | 194 | 2.5E-47 | ||
| ProSitePatterns | 211 | 239 | 29 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP. | ||
| Molecular function | NAD binding | Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0348300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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