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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR006139
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We have found 36 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.542s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0067359.1
n.a. PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356521735|ref|XP_003529507.1| chr0 23894504 23898568 -
2 domain predictions
3 GO terms
Lj0g3v0130969.1
n.a. PREDICTED: d-3-phosphoglycerate dehydrogenase-like isoform X2 [Cicer arietinum] gi|502127464|ref|XP_004499721.1| chr0 59523838 59531472 -
2 domain predictions
3 GO terms
Lj0g3v0310809.1
n.a. n.a. chr0 162335920 162338147 +
2 domain predictions
3 GO terms
Lj0g3v0310819.1
n.a. PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356521735|ref|XP_003529507.1| chr0 162336032 162338258 -
2 domain predictions
3 GO terms
Lj0g3v0361499.1
n.a. n.a. chr0 190426431 190427656 -
2 domain predictions
3 GO terms
Lj2g3v1014170.1
n.a. formate dehydrogenase [Lotus japonicus] gi|211970690|emb|CAR98204.1| chr2 15490871 15493564 +
2 domain predictions
3 GO terms
Lj2g3v1014180.1
n.a. formate dehydrogenase [Lotus japonicus] gi|211970690|emb|CAR98204.1| chr2 15491102 15493609 +
2 domain predictions
3 GO terms
Lj2g3v2002800.1
n.a. Glyoxylate reductase [Medicago truncatula] gi|357468403|ref|XP_003604486.1| chr2 30493824 30494768 +
2 domain predictions
3 GO terms
Lj2g3v2002820.1
n.a. n.a. chr2 30499557 30500840 -
2 domain predictions
3 GO terms
Lj2g3v2002820.2
n.a. n.a. chr2 30499557 30513356 -
2 domain predictions
3 GO terms
Lj2g3v2002840.1
n.a. PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2-like [Cicer arietinum] gi|502147592|ref|XP_004506841.1| chr2 30510304 30513177 +
2 domain predictions
3 GO terms
Lj3g3v0235170.1
n.a. PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2-like [Cicer arietinum] gi|502081028|ref|XP_004486744.1| chr3 1431588 1433474 -
2 domain predictions
3 GO terms
Lj3g3v2720150.1
n.a. PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cicer arietinum] gi|502157767|ref|XP_004510901.1| chr3 33318625 33320602 -
2 domain predictions
3 GO terms
Lj3g3v2720150.2
n.a. PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cicer arietinum] gi|502157770|ref|XP_004510902.1| chr3 33323807 33325759 -
2 domain predictions
3 GO terms
Lj4g3v2917540.1
n.a. PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2-like [Cicer arietinum] gi|502147592|ref|XP_004506841.1| chr4 38809033 38810328 +
2 domain predictions
3 GO terms
Lj5g3v2113470.1
n.a. PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356536156|ref|XP_003536605.1| chr5 30449031 30452111 +
2 domain predictions
3 GO terms
Lj5g3v2113470.2
n.a. PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356536156|ref|XP_003536605.1| chr5 30449031 30452111 +
2 domain predictions
3 GO terms
Lj5g3v2242500.1
n.a. peroxisomal hydroxypyruvate reductase [Glycine max] gi|167963236|dbj|BAG09374.1| chr5 32472817 32476713 +
2 domain predictions
3 GO terms
LotjaGi2g1v0247200.1
n.a. formate dehydrogenase; TAIR: AT5G14780.1 formate dehydrogenase; Swiss-Prot: sp|Q07511|FDH_SOLTU Formate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|B6VPZ9|B6VPZ9_LOTJA Formate dehydrogenase, mitochondrial; Found in the gene: LotjaGi2g1v0247200 LjG1.1_chr2 71260014 71263167 +
2 domain predictions
3 GO terms
LotjaGi2g1v0428400_LC.1
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|A0A151SH67|A0A151SH67_CAJCA Glyoxylate reductase; Found in the gene: LotjaGi2g1v0428400_LC LjG1.1_chr2 92584416 92590258 +
2 domain predictions
3 GO terms
LotjaGi2g1v0428400_LC.2
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|A0A151SH67|A0A151SH67_CAJCA Glyoxylate reductase; Found in the gene: LotjaGi2g1v0428400_LC LjG1.1_chr2 92584417 92586691 +
2 domain predictions
3 GO terms
LotjaGi2g1v0428600.1
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|G7JJF7|G7JJF7_MEDTR D-glycerate dehydrogenase/hydroxypyruvate reductase; Found in the gene: LotjaGi2g1v0428600 LjG1.1_chr2 92606231 92609560 +
2 domain predictions
3 GO terms
LotjaGi2g1v0428600.2
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|G7JJF7|G7JJF7_MEDTR D-glycerate dehydrogenase/hydroxypyruvate reductase; Found in the gene: LotjaGi2g1v0428600 LjG1.1_chr2 92606249 92609197 +
2 domain predictions
3 GO terms
LotjaGi3g1v0001700.2
n.a. D-3-phosphoglycerate dehydrogenase; TAIR: AT1G17745.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O04130|SERA2_ARATH D-3-phosphoglycerate dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7IRI9|A0A1J7IRI9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0001700 LjG1.1_chr3 241134 243956 -
2 domain predictions
3 GO terms
LotjaGi3g1v0018000.1
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|A0A1J6ILY2|A0A1J6ILY2_NICAT Glyoxylatehydroxypyruvate reductase a hpr2; Found in the gene: LotjaGi3g1v0018000 LjG1.1_chr3 1887497 1889736 -
2 domain predictions
3 GO terms
LotjaGi3g1v0335100.1
n.a. D-3-phosphoglycerate dehydrogenase; TAIR: AT1G72190.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|O29445|SERA_ARCFU D-3-phosphoglycerate dehydrogenase; TrEMBL-Plants: tr|A0A0B2QT46|A0A0B2QT46_GLYSO D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi3g1v0335100 LjG1.1_chr3 70526661 70534622 -
2 domain predictions
3 GO terms
LotjaGi3g1v0335100.2
n.a. D-3-phosphoglycerate dehydrogenase; TAIR: AT1G72190.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|O29445|SERA_ARCFU D-3-phosphoglycerate dehydrogenase; TrEMBL-Plants: tr|A0A0B2QT46|A0A0B2QT46_GLYSO D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi3g1v0335100 LjG1.1_chr3 70527220 70534336 -
2 domain predictions
3 GO terms
LotjaGi3g1v0343100.1
n.a. D-3-phosphoglycerate dehydrogenase; TAIR: AT1G17745.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O04130|SERA2_ARATH D-3-phosphoglycerate dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr|I1KG47|I1KG47_SOYBN D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi3g1v0343100 LjG1.1_chr3 71886314 71892538 +
2 domain predictions
3 GO terms
LotjaGi3g1v0366700.1
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|G7JJF7|G7JJF7_MEDTR D-glycerate dehydrogenase/hydroxypyruvate reductase; Found in the gene: LotjaGi3g1v0366700 LjG1.1_chr3 75286722 75291235 -
2 domain predictions
3 GO terms
LotjaGi3g1v0366700.2
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|I1KGN9|I1KGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0366700 LjG1.1_chr3 75287816 75291218 -
2 domain predictions
3 GO terms
LotjaGi3g1v0429500.1
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q9LE33|HPR3_ARATH Glyoxylate/hydroxypyruvate reductase HPR3; TrEMBL-Plants: tr|A0A1J7I1B8|A0A1J7I1B8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0429500 LjG1.1_chr3 84081985 84088299 -
2 domain predictions
3 GO terms
LotjaGi3g1v0429700.1
n.a. Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q9LE33|HPR3_ARATH Glyoxylate/hydroxypyruvate reductase HPR3; TrEMBL-Plants: tr|A0A072TNE4|A0A072TNE4_MEDTR D-isomer specific 2-hydroxyacid dehydrogenase domain protein; Found in the gene: LotjaGi3g1v0429700 LjG1.1_chr3 84090953 84093261 -
2 domain predictions
3 GO terms
LotjaGi5g1v0327800.1
n.a. D-3-phosphoglycerate dehydrogenase; TAIR: AT4G34200.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O49485|SERA1_ARATH D-3-phosphoglycerate dehydrogenase 1, chloroplastic; TrEMBL-Plants: tr|I1LEI9|I1LEI9_SOYBN D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi5g1v0327800 LjG1.1_chr5 64507654 64511991 +
2 domain predictions
3 GO terms
LotjaGi5g1v0348300.1
n.a. D-glycerate dehydrogenase/hydroxypyruvate reductase; TAIR: AT1G68010.1 hydroxypyruvate reductase; Swiss-Prot: sp|P13443|DHGY_CUCSA Glycerate dehydrogenase; TrEMBL-Plants: tr|I3S3H0|I3S3H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348300 LjG1.1_chr5 66425362 66430548 +
2 domain predictions
3 GO terms
LotjaGi5g1v0348300.2
n.a. D-glycerate dehydrogenase/hydroxypyruvate reductase; TAIR: AT1G68010.3 hydroxypyruvate reductase; Swiss-Prot: sp|P13443|DHGY_CUCSA Glycerate dehydrogenase; TrEMBL-Plants: tr|I3S3H0|I3S3H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348300 LjG1.1_chr5 66425633 66428557 +
2 domain predictions
3 GO terms
LotjaGi5g1v0348300.3
n.a. D-glycerate dehydrogenase/hydroxypyruvate reductase; TAIR: AT1G68010.3 hydroxypyruvate reductase; Swiss-Prot: sp|P13443|DHGY_CUCSA Glycerate dehydrogenase; TrEMBL-Plants: tr|I3S3H0|I3S3H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348300 LjG1.1_chr5 66425633 66428580 +
2 domain predictions
3 GO terms