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IPR029752 is a D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1.
<p>A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related [[cite:PUB00000187], [cite:PUB00000212], [cite:PUB00002643], [cite:PUB00003316]]. All these enzymes have similar enzymatic activities and are structurally related.</p> <p>This is a glycine-rich conserved site located in the central section of these enzymes, which probably corresponds to the NAD-binding domain.</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356521735|ref|XP_003529507.1| | 15 | ||
– | 17 | |||
– | PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356521735|ref|XP_003529507.1| | 22 | ||
– | 13 | |||
– | Ubiquitin-like modifier-activating enzyme [Medicago truncatula] gi|357465057|ref|XP_003602810.1| | 11 | ||
– | Ubiquitin-like modifier-activating enzyme [Medicago truncatula] gi|357465057|ref|XP_003602810.1| | 11 | ||
– | Formate dehydrogenase [Lotus japonicus] gi|211970690|emb|CAR98204.1| | 24 | ||
– | Formate dehydrogenase [Lotus japonicus] gi|211970690|emb|CAR98204.1| | 24 | ||
– | 13 | |||
– | 13 | |||
– | PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2-like [Cicer arietinum] gi|502147592|ref|XP_004506841.1| | 13 | ||
– | PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2-like [Cicer arietinum] gi|502081028|ref|XP_004486744.1| | 13 | ||
– | PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cicer arietinum] gi|502157767|ref|XP_004510901.1| | 13 | ||
– | PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max] gi|356554814|ref|XP_003545737.1| | 20 | ||
– | PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356536156|ref|XP_003536605.1| | 18 | ||
– | PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356536156|ref|XP_003536605.1| | 29 | ||
– | Peroxisomal hydroxypyruvate reductase [Glycine max] gi|167963236|dbj|BAG09374.1| | 13 | ||
– | PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max] gi|356549501|ref|XP_003543132.1| | 20 | ||
– | Ubiquitin-like modifier-activating enzyme 5; TAIR: AT1G05350.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O23034|UBA5_ARATH Ubiquitin-like modifier-activating enzyme 5; TrEMBL-Plants: tr|I3S0U0|I3S0U0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0338800 | 11 | ||
– | Formate dehydrogenase; TAIR: AT5G14780.1 formate dehydrogenase; Swiss-Prot: sp|Q07511|FDH_SOLTU Formate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|B6VPZ9|B6VPZ9_LOTJA Formate dehydrogenase, mitochondrial; Found in the gene: LotjaGi2g1v0247200 | 24 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|A0A151SH67|A0A151SH67_CAJCA Glyoxylate reductase; Found in the gene: LotjaGi2g1v0428400_LC | 12 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|A0A151SH67|A0A151SH67_CAJCA Glyoxylate reductase; Found in the gene: LotjaGi2g1v0428400_LC | 12 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|G7JJF7|G7JJF7_MEDTR D-glycerate dehydrogenase/hydroxypyruvate reductase; Found in the gene: LotjaGi2g1v0428600 | 13 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|G7JJF7|G7JJF7_MEDTR D-glycerate dehydrogenase/hydroxypyruvate reductase; Found in the gene: LotjaGi2g1v0428600 | 13 | ||
– | D-3-phosphoglycerate dehydrogenase; TAIR: AT1G17745.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O04130|SERA2_ARATH D-3-phosphoglycerate dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7IRI9|A0A1J7IRI9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0001700 | 28 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|A0A1J6ILY2|A0A1J6ILY2_NICAT Glyoxylatehydroxypyruvate reductase a hpr2; Found in the gene: LotjaGi3g1v0018000 | 13 | ||
– | D-3-phosphoglycerate dehydrogenase; TAIR: AT1G17745.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O04130|SERA2_ARATH D-3-phosphoglycerate dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr|I1KG47|I1KG47_SOYBN D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi3g1v0343100 | 29 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|G7JJF7|G7JJF7_MEDTR D-glycerate dehydrogenase/hydroxypyruvate reductase; Found in the gene: LotjaGi3g1v0366700 | 13 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q65CJ7|HPPR_PLESU Hydroxyphenylpyruvate reductase; TrEMBL-Plants: tr|I1KGN9|I1KGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0366700 | 13 | ||
– | Glyoxylate reductase/hydroxypyruvate reductase; TAIR: AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein; Swiss-Prot: sp|Q9LE33|HPR3_ARATH Glyoxylate/hydroxypyruvate reductase HPR3; TrEMBL-Plants: tr|A0A1J7I1B8|A0A1J7I1B8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0429500 | 13 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|I3SGU0|I3SGU0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0041200 | 13 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A0K8WMD6|A0A0K8WMD6_9FABA Cinnamyl-alcohol dehydrogenase 2; Found in the gene: LotjaGi4g1v0041200 | 19 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A0K8WMD6|A0A0K8WMD6_9FABA Cinnamyl-alcohol dehydrogenase 2; Found in the gene: LotjaGi4g1v0041200 | 19 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A0K8WMD6|A0A0K8WMD6_9FABA Cinnamyl-alcohol dehydrogenase 2; Found in the gene: LotjaGi4g1v0041200 | 19 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|I3S2Q2|I3S2Q2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0041200 | 18 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|I3S2Q2|I3S2Q2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0041200 | 14 | ||
– | D-3-phosphoglycerate dehydrogenase; TAIR: AT4G34200.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O49485|SERA1_ARATH D-3-phosphoglycerate dehydrogenase 1, chloroplastic; TrEMBL-Plants: tr|I1LEI9|I1LEI9_SOYBN D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi5g1v0327800 | 29 | ||
– | D-glycerate dehydrogenase/hydroxypyruvate reductase; TAIR: AT1G68010.1 hydroxypyruvate reductase; Swiss-Prot: sp|P13443|DHGY_CUCSA Glycerate dehydrogenase; TrEMBL-Plants: tr|I3S3H0|I3S3H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348300 | 13 | ||
– | D-glycerate dehydrogenase/hydroxypyruvate reductase; TAIR: AT1G68010.3 hydroxypyruvate reductase; Swiss-Prot: sp|P13443|DHGY_CUCSA Glycerate dehydrogenase; TrEMBL-Plants: tr|I3S3H0|I3S3H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348300 | 13 | ||
– | D-glycerate dehydrogenase/hydroxypyruvate reductase; TAIR: AT1G68010.3 hydroxypyruvate reductase; Swiss-Prot: sp|P13443|DHGY_CUCSA Glycerate dehydrogenase; TrEMBL-Plants: tr|I3S3H0|I3S3H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348300 | 13 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A151R322|A0A151R322_CAJCA Putative cinnamyl alcohol dehydrogenase 1; Found in the gene: LotjaGi6g1v0348000 | 19 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A151R322|A0A151R322_CAJCA Putative cinnamyl alcohol dehydrogenase 1; Found in the gene: LotjaGi6g1v0348000 | 19 | ||
– | Alcohol dehydrogenase, putative; TAIR: AT1G72680.1 cinnamyl-alcohol dehydrogenase; Swiss-Prot: sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A151R322|A0A151R322_CAJCA Putative cinnamyl alcohol dehydrogenase 1; Found in the gene: LotjaGi6g1v0348000 | 19 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd05283 | CDD | 1 | 2.33 |