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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0351000 |
| Transcript ID | LotjaGi5g1v0351000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hippocampus abundant transcript 1 protein; TAIR: AT5G42210.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q96MC6|MF14A_HUMAN Hippocampus abundant transcript 1 protein; TrEMBL-Plants: tr|I1NF77|I1NF77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0351000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66669747..66674974) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGGGTTAACAGGGCTGAGCCACCTTTTCGTGACCATGTTTCTTACGGGTTTTGGCGGCGTCATAGCTATTCCGGC GATCACAGATATCACCATGGCTGCACTCTGCCCCGGTCAGGATGAGTGCTCTCTCGCCATTTACCTCACCGGTTTCCAGC AAGCTGTCAGTCCACTCTCTCTCTATATACCCAACTCTCCCTCTCTCTCTCTCTCTCTAATTTCCTGCATTTCAATTTTA ACTTTTGTGGGTTGTGCACTAGTGCATAATGCTCCATTTTTTAATTTTCAATTTTTAAAAATAAGAAAACATACTATATG GTTTGAACTTGTGATTATCAATTCATACTATTATACCTAGTAGTCTTATCAATTCATACTATTATACCTAGTAGTCTTAG TCATTATATGCCATATTTGGGTGTGTGCAGATCTTACAAGCAACCCCCCGGCTTTGCCTTGTCTCAAATATATCTCTAAG AGAAAAAGTTTGATGCACCGACGGTATAAAGTTTTTTTACACCGTCAACCAATCAGATTTCAAGAATGTGAGAAAATTTT TCTTTTCATTTAATTTCTTTAATTGACATGTTACATCCTTGAAATCTGATTGGTTGACGGTGTAAAAAAACTTTACACTG TCGGTGCATCAAAATTAAACTCTATTTTTAATATTCTTTATCTTAGACAAACAATAATAAATTAATTAACTTATATGTAT GTCAACCTCTCCTGCAATTGCGTGTTTTTATATATTGGTATTGAGTTACTGATTTGCCAACAAGCATTTTTTGTTGCATT ACCCAATCAATTCAAATCAGTTTACTTTTTAATCACCAAATTCAAGTTAATTTTTGCATGCATAAATCACAACCTTACAA TTAATTGATGGGAAGTCACTTCAATATAATAGAACACCCAAAATTAAGAGATGTGTATGTCTCTTTTTGACTTTTTACAA GCATTACTTCTTTTTCCCGTGCAAGCTACGTTAGTTACGCTTTATAGATGTTCCGTTTGCATCACACACATATGTGATTG CACCAAATTCTAGTGAGTAGCTTAAAGTGCATAGTTTCATCTTGTCACTATAGTATATAGTTGATGCACTTTAGTTTTAC GGTTTATAGTTTACATCTTATTGCACAAGAAACAAAATTCGTTCAACCAACCAACACTGTAATTTATTTCTTACGCTCAT AGCTTGGCAAATATACATTATGAACTCTATATACTAAATTAATCTGTGAAAAATATATTCGATTGGAAAACATTAATATG ATTTTGGGGGTGAATATGTATTGCTGCAGATGATTGGAGTGGGGTCAGTGGTGACGACGCCATTAATAGGGAACTTGTCC GACCGATACGGTCGAAAAGCCTTACTCACACTTCCTCTTACTGTGTCGGTCATTCCTCAAGGTCTGTACATATTATTATA TGCACATACATTGTTTCTTTGGTTTTCATTATTTAAAAACTCTTTAATTTAGGAACATTTTTATCATAGACGATTTTACA CGTAATGGATCAATCAATTTATATACACATAACATAATTAGTTACTCCACGCTTGGAGGTTTTTTTTTCTTTCTGAAATT GGTTTGTTGTTAAGAGAGGCCTGTGATTGAGAGCCCAGTCCCACAAAGTATGGGCCCAGCTGTACCATGCTGTGTAGTGG ATGGCTACTATCGTTTTCGTGTGTTTTGTTTTCTACAATTTTGTAGTAACAACAATCATTACCCGTGGATTTAGTGAGGA TAAAATAGGTGGTATTGCATAATCACTTCTATATAAGTTCTTATGTTCTCATCATGGGAAGCCTAATCATGAATGATTCA TCCATAAGCGACCAAAAAATATCTTCGGGTATCTACTAGTAGTACTACCATTTCATGAGATGTCCAAATCTTTCATCTCT TGCATTTGTGACTCTACAAAGAAAGATTCCCATACTGTTTGGCACTCAAACCAACCCTATCAATTGATCCAAACTTTGAC CACAAAAAAAAATCATCAATTAATCTTATCAAACGATCCAAACTTAGTTACCAATAATTTAATAATTTATCTCTTATTGA CATATCTTTAAAATGTTACTGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAACTCAGAAGT TATTTGTACAAAACAAAAAATACTAATTTACTATATATACCTTCAATTACGTGAATCGACATTTATGCATGTGGAGGATA CTAACTTGTATAAGGTTAATTAGCAACGCTAACTACATATAGTAATGTGGTATTACATCTGCAGTGATATTGGCATATAG CAGGGATACCAAGTTCTTCTATGTGTACTATGTGGTCAGAACTCTTGCTGCCATTGCAGGCGAAGGCAGCTCCCATTGCC TAGCTCTTGCATATGTGGTACTTCCCAATCTCATAAACCTTATCAATGAGGCTCATACACTCACACAAATGCTTCATAGC TACTCAATTAATTGGTTCAAATTAGAGTTTAATATCTACGCACTTATAGAGTAACAAATCTTCAATCAGGATTACTATTT TTCCATAACAAACCTTCAATGCCAGTCAAGATATGATTGAATGTTACACATGTTGGTGTATATAAATTAATTCCTTCAGA TTATAACATATATTGGCATTTTGATGTGGTCATATTAGGCAGACAAGGTTCCAGATGGGAGAAGGACAACAGCATTTGGA ATACTTGCTGGTGTAGGATCAGCAGCATTTGTTGGTGGTACATTAGCTGCTCGTTTCCTACCCACTGCTTTGATATTTCA GGTTACAGGGTCAAACTTTCTGTCTATGGTTCTTCATCATTGTTTAAATACTTAAGAATTTCTTAGCATGCTGCTAGTTG TTTCTCATACCCCTTTTCTTATTTTCCTACATTTGTAATTGGTTTATTCAGGTTTCTGCAGTCTTCTCAATGATTGGTTT GGTATACATGAGAATTTTCCTTAAGGATAGTGTACCTGGTGGTGGCATGAGGCAGCCATTATTGAAGGAGGCTGAGGAAC CATGTCTTGAACAGTGTGCGGATGATTCATCGAACAGGACAACAGGAACATTTAAGAAACTGCCTTCGTTGGGGGATGTA ATTTGTTTGCTGAAGTGCAGGTACCTTACACAGAAATGCCTCTTGAATTTGGCCACGATTGAAATAGATTGTTTAAGATT ATCTTATAGCAAAAACAATTATGCAAATGTTTAGGTAATCTTATGAAAAGAATTTGTGACATACCTACAAACTGTTTTGA GTTTATTTTTCAAAATCTGCTCAGATCAGCTTATGAATAAGCGCTTACACCTGCTTATCTGTTTTGAACTTATTTCACTC AAATTAGCTTATGGTTGTTTACACAAACACTAAGAAGTGCTTATGTGATGAGCACTTGTGGCTGTTTAGTGTTTACCCAA ACACACCATTAGTATAGATTAAGGGCATTAATACTTTTTTCACAAAATCTCTTTGTGGCTACCTATTACCAACTCAAGCA ACGTATTTGAAAGAGTTGTTGATCATGCAAGCTTCATGTTTGCAGCCCCACATTCTCACAAGCAGCGGTTGTTTTTCTCT TCAATAGTCTTGCAGATGGTGGCTTGATGTCTATATTGCTGGTAAATTATTCATTACTTTCAAATAAATACATTAGAGTC AAATTCTGTTACTAATTAAATTTCCCACTACATGCAGTACTATTTAAAGGCGCGTTTTCAGTACAACAAGAACCAGTTTG CTGATTTGATGATGATTACTGGGATTGGAGCAACTCTCTCACAAGTAGGCCTTAGTTCTAAGTAGCTGTTTTGTTATTTT GAATTTTTTATGTGTTGTGAAATTTATTCAACTAACATTTTCACTTTCAGTATCCGTAAATGTCACTACAAATGTTAATG ACTAACTTTTTGTGGTTGGTTTTGTGTATTTGCAATTCCTTTTCCCAGCTAGTTTTCATGCCCATTTTAGTACCTCTAGT AGGAGAGGAGAAGTTACTCTCAACAGGGCTCCTAGTTAGCTGCATAAATGTAAGTTCAAGCCTCACTCTTCTCAAGATTT CTTATCTGAACTTAGAAGGCATGCAAATATGATATGATGGTAGTATTAGAGGTATTACTCAAAAAAAAAATCTAATTATA TTCAGTTGAATCAATTTTCAGATTTAATTTAACAACTGTTCCGATTCAAATTGAACAGAACTCAAATGCATATACATAAT TTTATGAAGATACTGATGATGGTTCATAATATGTAATGTTGTGCAGATCTTTATTTACAGCATATCGTGGTCAGGATGGG TAATTATCTTCAAATACATTCTTAATTGTTTATATCTTTTCAAAACAAGCCTTCAAGACTTTTGAAAACCATGCAGGTTC CTTATGCTCTAGCAGGTTTCTCTGTTTTTGGTGTTTTTGTGCGTCCAAGTGTAAGTTTCTTGTGTCCGCTGCCCTTCCTA CTGGAATTGGTTTTGTTCAACTACAATGAAATAGTACTCTAATCTCTCACGTTTCATATTTGCCACAGATATGCAGCATT GCATCGAAACAAGTTGGACCTACTGAACAGGTATCCCTAATGAGAAAATGGATTTCCTGCAGTGTAACACATTCTTAAAC TGTATTTTCAGAATGTTCAGATTATAACATTGAAAACTGATACAATAAATCTGTTGTTAAATCTATTTTGCAGCATTGAG GGACAACTTAATCTTTATATGTGTGAATTTATATCCTTTTGCTTTTAGCCTAACTCATCAGCCTTTGATTTAGGGGATGG TTCAAGGATGCCTTTCAGGAATTAGTTCTATTGCCAACATTATTGCTCCGTTAATTTTCAGTCCAATGACAGGTACAACC ATAATTAGGAGCAAAGTCCAAGGACATATTATATATATATATATATATATAGTACCACTGAATTGAGAAGAAAAACATCA GAAACTAATAAGCTTCTCCATGGTGTGCAGCCTTGTTCCTGTCAGAAGAAGCACCATTTAACTTTCCCGGCTTCAGTCTA ATGTGCCTCGGGCTAATACTGGTAAGATGATTCTTCCATCTCAAGATCCAAGATTTATAGCATGTTTGGATTAGCTTATT TTTTCTCAAAATCAAATTTGGTTCTCAAAAACTACTCGTAGAAGTTTCTCCCTAAAATCATTTTGGCTTTAGAATCAATA ATAGAGTGATTTCCAAACATGCTACTAG
CDS sequence (LotjaGi5g1v0351000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGGGTTAACAGGGCTGAGCCACCTTTTCGTGACCATGTTTCTTACGGGTTTTGGCGGCGTCATAGCTATTCCGGC GATCACAGATATCACCATGGCTGCACTCTGCCCCGGTCAGGATGAGTGCTCTCTCGCCATTTACCTCACCGGTTTCCAGC AAGCTATGATTGGAGTGGGGTCAGTGGTGACGACGCCATTAATAGGGAACTTGTCCGACCGATACGGTCGAAAAGCCTTA CTCACACTTCCTCTTACTGTGTCGGTCATTCCTCAAGTGATATTGGCATATAGCAGGGATACCAAGTTCTTCTATGTGTA CTATGTGGTCAGAACTCTTGCTGCCATTGCAGGCGAAGGCAGCTCCCATTGCCTAGCTCTTGCATATGTGGCAGACAAGG TTCCAGATGGGAGAAGGACAACAGCATTTGGAATACTTGCTGGTGTAGGATCAGCAGCATTTGTTGGTGGTACATTAGCT GCTCGTTTCCTACCCACTGCTTTGATATTTCAGGTTTCTGCAGTCTTCTCAATGATTGGTTTGGTATACATGAGAATTTT CCTTAAGGATAGTGTACCTGGTGGTGGCATGAGGCAGCCATTATTGAAGGAGGCTGAGGAACCATGTCTTGAACAGTGTG CGGATGATTCATCGAACAGGACAACAGGAACATTTAAGAAACTGCCTTCGTTGGGGGATGTAATTTGTTTGCTGAAGTGC AGCCCCACATTCTCACAAGCAGCGGTTGTTTTTCTCTTCAATAGTCTTGCAGATGGTGGCTTGATGTCTATATTGCTGTA CTATTTAAAGGCGCGTTTTCAGTACAACAAGAACCAGTTTGCTGATTTGATGATGATTACTGGGATTGGAGCAACTCTCT CACAACTAGTTTTCATGCCCATTTTAGTACCTCTAGTAGGAGAGGAGAAGTTACTCTCAACAGGGCTCCTAGTTAGCTGC ATAAATATCTTTATTTACAGCATATCGTGGTCAGGATGGGTTCCTTATGCTCTAGCAGGTTTCTCTGTTTTTGGTGTTTT TGTGCGTCCAAGTATATGCAGCATTGCATCGAAACAAGTTGGACCTACTGAACAGGGGATGGTTCAAGGATGCCTTTCAG GAATTAGTTCTATTGCCAACATTATTGCTCCGTTAATTTTCAGTCCAATGACAGCCTTGTTCCTGTCAGAAGAAGCACCA TTTAACTTTCCCGGCTTCAGTCTAATGTGCCTCGGGCTAATACTGCAAATTTGGTTCTCAAAAACTACTCGTAGAAGTTT CTCCCTAAAATCATTTTGGCTTTAG
Protein sequence (LotjaGi5g1v0351000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGLTGLSHLFVTMFLTGFGGVIAIPAITDITMAALCPGQDECSLAIYLTGFQQAMIGVGSVVTTPLIGNLSDRYGRKAL LTLPLTVSVIPQVILAYSRDTKFFYVYYVVRTLAAIAGEGSSHCLALAYVADKVPDGRRTTAFGILAGVGSAAFVGGTLA ARFLPTALIFQVSAVFSMIGLVYMRIFLKDSVPGGGMRQPLLKEAEEPCLEQCADDSSNRTTGTFKKLPSLGDVICLLKC SPTFSQAAVVFLFNSLADGGLMSILLYYLKARFQYNKNQFADLMMITGIGATLSQLVFMPILVPLVGEEKLLSTGLLVSC INIFIYSISWSGWVPYALAGFSVFGVFVRPSICSIASKQVGPTEQGMVQGCLSGISSIANIIAPLIFSPMTALFLSEEAP FNFPGFSLMCLGLILQIWFSKTTRRSFSLKSFWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| PANTHER | 4 | 420 | 417 | 2.7E-200 | – | |
| PANTHER | 4 | 420 | 417 | 2.7E-200 | – | |
| ProSiteProfiles | 6 | 434 | 429 | 12.016 | ||
| Gene3D | 6 | 419 | 414 | 3.1E-39 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 7 | 25 | 19 | - | – | |
| CDD | 10 | 415 | 406 | 1.97216E-56 | – | |
| SUPERFAMILY | 10 | 425 | 416 | 2.88E-38 | ||
| Pfam | 10 | 384 | 375 | 3.8E-24 | ||
| Phobius | 26 | 44 | 19 | - | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Phobius | 45 | 68 | 24 | - | – | |
| Phobius | 69 | 79 | 11 | - | – | |
| TMHMM | 79 | 98 | 20 | - | – | |
| Phobius | 80 | 98 | 19 | - | – | |
| Phobius | 99 | 103 | 5 | - | – | |
| Phobius | 104 | 130 | 27 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 131 | 141 | 11 | - | – | |
| Phobius | 142 | 161 | 20 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| Phobius | 162 | 166 | 5 | - | – | |
| Phobius | 167 | 188 | 22 | - | – | |
| TMHMM | 169 | 188 | 20 | - | – | |
| Phobius | 189 | 246 | 58 | - | – | |
| Phobius | 247 | 268 | 22 | - | – | |
| TMHMM | 247 | 269 | 23 | - | – | |
| Phobius | 269 | 279 | 11 | - | – | |
| Phobius | 280 | 299 | 20 | - | – | |
| TMHMM | 284 | 306 | 23 | - | – | |
| Phobius | 300 | 310 | 11 | - | – | |
| Phobius | 311 | 330 | 20 | - | – | |
| TMHMM | 311 | 330 | 20 | - | – | |
| Phobius | 331 | 335 | 5 | - | – | |
| TMHMM | 334 | 353 | 20 | - | – | |
| Phobius | 336 | 356 | 21 | - | – | |
| Phobius | 357 | 367 | 11 | - | – | |
| TMHMM | 366 | 388 | 23 | - | – | |
| Phobius | 368 | 387 | 20 | - | – | |
| Phobius | 388 | 398 | 11 | - | – | |
| Phobius | 399 | 419 | 21 | - | – | |
| TMHMM | 403 | 420 | 18 | - | – | |
| Phobius | 420 | 434 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0351000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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