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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0353700 |
| Transcript ID | LotjaGi5g1v0353700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8; TrEMBL-Plants: tr|A0A072W2G8|A0A072W2G8_MEDTR GRAM domain protein/ABA-responsive-like protein; Found in the gene: LotjaGi5g1v0353700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66930869..66933091) extracted from Lotus japonicus Gifu genome v1.2.
GTAATGGCTGCTATGTCCAAAAATTCCGTTGATTTGTTTCACTTTCTTGCTTTGAAGCTAGTCTATTAATTGGGCAATAA AAATTCTCTGTACCATGTTTTTCAAAACTGTTTCTGACATAGAGGTTTTATTTCCTTATTTCAATTAACCACTATGAAAT CTTGCTCCTGAAGATATATAAACCTCTCTCTATGCCTCTAAAAACTAGCCCTATGAAGGTTTTCTTTTTTAAGTTTTATA AAAGTTGACATGGATATCTCTGTAGCATCTTTTTCTAAAAGCAACCAAACAATCCATGATGTCAAAATATTATCTTGAAT AACTGTCCCTCAAGTTGCCTTTGCAGGCATCTTTATTTGAAAAAAAGATAATGGTTGATGATCCAAGGTTGAGTCATCCC ACCAAAGGCTCAAGATTCACTTCCAAGTTTCCATCCCTTTAAATACCTCCTTGGAGTTGAAGCGACTGATCAAACTCAAT TGAGCATAGTTTCCTTAGTAATAGAGTAGCTCAGGCAATTCCTCTTCACCATAAAACAGAAACCTTAACTTAGCATATTC AACATGCAGACCTCACTTTTTCATGAGCTAGTTGTTGGAACTCCAATCATGTCAACAACATATGATCAGGTTCAAAAGTC ATTTAACAGATACTTACCTGATCCTGCAACTCAGGGTCAATACCCAACCACAAGATCAAAACAAGGTAAGAGTTTCATTT ACTTTAAAGAAAAACATCTAGTTTCATTATAAAGCATTGAAGGTTTTTCTAATCTCAAAGGCTTCAATGTTTCAGGGAGA GTATTTTATTCGATTAAGAACAAGACTGGAAGGAAGGAACATAGTCTTTCACAAAGAGTCCAAGAACATGGTGAGTATCC CTGTAAGCCTTAGAACTAGTTTGAATGCAGGCCGAAACATGGTGAAAGTATCTAATTCTATTCATATAAATTTGAAATTG CAGTGAGAGTAGGAGCAAATATATCTGAGACTATTAAGAGGAAGTTGAGCTTAGGGGCTCTTATTGTACAAGTTGGTGGA GTGGAGAAAGTCTTTAATCATAATTTTAGTGTAAAAGAAGGGGAGAAGCTGTTGAAAGTTTCACAGTGTTATCTTTCCAC CACATCAGGACCTCTAGAAGGTCTTCTTTTTATCTCCACAGAGAAGGTTGCCTTTTGCAGTGAGAGATCATTGAAAGTGT TTACTCAGAAGGGTCACATGCGTAGGATCCGCTATAAGGTATAAACTTCTTCATATCTCTCAGTTTCCCTTAATTCCTGA TTTTATGAAGTTCTGAATGGTGTATGTCTCATGTTCATGTACAGGTTTCCATTCCTCTGAAGAAGATCAAGTGTGTGAAC CAAAGTCAAAATGTTGAGAAGCCAAAACAGAAGTACATAGAGATAGTTACAGAGGACAATTTTGATTTCTGGCTTATGGG TGTCATAAATTATCAGAAAACCCTCCGGTATCTTCAGCAAGCAGTTTCTCAAGCTTAGATGAATGGAAAAATCCACAGTT TGAAGCATAAAGAGCCAAGGCTTGAAGCTTCATGTGGTCAGGGAAAAAACAAAAACTAAGATACAAAGAGATTATCAGAA AAAAAAACTATATAAAGTGGCAGTTGCAGCTAAAATTGAAGATATTTGGCTTTTTCGGTGATAAGAGGGACTTCACTTCC TTTGATATTGACCTTTGATAGTCATTGGATGTGGATCATATCAGAAGACGAAGCAGAGTTGGCTGCGAGCATTTTGTGGG AAGATGTTGTGAATGAAAGAGTTCAACATCTGGTGCTTGCTTTGTTAGACAACTCCCTATGATCCATCCAGAGACAGGCC TATTTTTGCCCTCTATGAAGGGAGATAATGGTTATGGTACAAGATCATATTGAAGGAAAAATACATAGTGAAAGAGTGAA TTGAATTTTCACAAGGAAATCCAATGTGTATATATTTGTGTATATAGTTTTCTTCAAGCCTTGTTGCTGATCTGTATAAG TTTCAGGCTCCATGTGGATTTATTTTTCATCATGTAAATGTTTTTAGGAATCAGAAAGTGTATTTCAGATTGTATCCACA ATTCCATACCATCCAACTCCTTGAAAAAATGTGTGATTAGTCAATTTGATTCTGCTTTAATTAGTGAGTTTAAATAATTA ACAAAAAGCATGATAGATTACATTGATAAATGAACACGGTAAGGGATATGATTTTCAGTAAAC
CDS sequence (LotjaGi5g1v0353700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGACCTCACTTTTTCATGAGCTAGTTGTTGGAACTCCAATCATGTCAACAACATATGATCAGGTTCAAAAGTCATT TAACAGATACTTACCTGATCCTGCAACTCAGGGTCAATACCCAACCACAAGATCAAAACAAGGGAGAGTATTTTATTCGA TTAAGAACAAGACTGGAAGGAAGGAACATAGTCTTTCACAAAGAGTCCAAGAACATGTGAGAGTAGGAGCAAATATATCT GAGACTATTAAGAGGAAGTTGAGCTTAGGGGCTCTTATTGTACAAGTTGGTGGAGTGGAGAAAGTCTTTAATCATAATTT TAGTGTAAAAGAAGGGGAGAAGCTGTTGAAAGTTTCACAGTGTTATCTTTCCACCACATCAGGACCTCTAGAAGGTCTTC TTTTTATCTCCACAGAGAAGGTTGCCTTTTGCAGTGAGAGATCATTGAAAGTGTTTACTCAGAAGGGTCACATGCGTAGG ATCCGCTATAAGGTTTCCATTCCTCTGAAGAAGATCAAGTGTGTGAACCAAAGTCAAAATGTTGAGAAGCCAAAACAGAA GTACATAGAGATAGTTACAGAGGACAATTTTGATTTCTGGCTTATGGGTGTCATAAATTATCAGAAAACCCTCCGGTATC TTCAGCAAGCAGTTTCTCAAGCTTAG
Protein sequence (LotjaGi5g1v0353700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTSLFHELVVGTPIMSTTYDQVQKSFNRYLPDPATQGQYPTTRSKQGRVFYSIKNKTGRKEHSLSQRVQEHVRVGANIS ETIKRKLSLGALIVQVGGVEKVFNHNFSVKEGEKLLKVSQCYLSTTSGPLEGLLFISTEKVAFCSERSLKVFTQKGHMRR IRYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVINYQKTLRYLQQAVSQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 219 | 216 | 8.6E-94 | – | |
| PANTHER | 4 | 219 | 216 | 8.6E-94 | ||
| Gene3D | 98 | 220 | 123 | 1.8E-5 | ||
| SMART | 101 | 179 | 79 | 1.6E-15 | ||
| Pfam | 102 | 220 | 119 | 4.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0353700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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