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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0353700 |
| Transcript ID | LotjaGi5g1v0353700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FTA0|GEML4_ARATH GEM-like protein 4; TrEMBL-Plants: tr|K7LM06|K7LM06_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0353700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66930869..66936761) extracted from Lotus japonicus Gifu genome v1.2.
TGTCAAAATATTATCTTGAATAACTGTCCCTCAAGTTGCCTTTGCAGGCATCTTTATATGAAAAAAAGATAATGGTTGAT GATCTACGGTTGAGTCATCCCACCAATCGCTCAAGATTCACTTCCAAGTTTTCGTCCCTTTAAATACCTCCTTGGAGTTG AAGTGACTGATCAAACTCAATTGAGTGTAGCTTCCTTAGAAATCTAGTATCCCTTCCTCTTCACCTATTACTAGTCCTTT CAATAAAACAGAAACCTTAACTAATCATATTCAACATGCAGACCGCACTTCTTCATGAGCTAGTTGGAACACCAATCATG TCAACAACATATGATCAGGTTCAAAAGTCATTTAACAGATACTTACCTGATCCTGCAACACAGGGGCAATACCGAACCAC AAGATCAAAACAAGGTAAGATTTTCTTTTACTTTAAACACAAACATCTAGTTTCATTAAGAAGTATTGATGGTTTTTCTA ATCTCAAAAGCTTCAATGTTTCAGGGAGAGTATTTTATTCGATTAAGAACAACACTGGAAGGAAGGAACATAATCTTTCA CAAAGTGTCCAAGAACATGGTGAGTATCCCTGTAAGCCTTAGAATCCATTTGAATGCCGGCCGAAACATGGTGAAAATTT CTAATTCTGTTTATATAACTTTGAAATTGCAGTGAGAGTAGGGGCAAATATATCTGAAACTATTAAGAGGAAGTTGAGCT TAGGGGCTCTTATTGTACAAGTTGGTGGAGTGGAGAAAGTCTTTAATCAGAATTTTAGTGTAAAAGAAGGGGAGAAGCTG TTGAAAGTTTCACAGTGCTATCTTTCCACCACATCAGGCCCTCTAGCAGGTCTTCTTTTTATCTCCACTGAGAAGGTTGC CTTTTGCAGTGAGAGATCATTGAAAGTGTTTACTCAGAAGGGTCACATGCGTAGGATCCGCTATAAGGTATATCTATATA TAAACTTCTTCTTATCTCTCAGTTCCCTTAATTCCTGATTTTATGAAATTCTGAATGGTATATATCTCATGTTCATGTAT AGGTTTCCATTCCTCTGAAGAAGATCAAGTGTGTGAACCAAAGTCAAAATGTTGAGAAGCCAAAACAGAAGTACATAGAG ATAGTTACAGAGGACAATTTTGATTTCTGGCTTATGGGTGTCATAAATTATCAGAAAACCTTCAGGTATCTTCAGCAAGC AGTTTCTCAAGCTTAGATGAATGGAAAATCCACAGTTTGAGCATAAAGAGCCAAGGCTTAAAGCTTCATTTGGTCAGGAC ATAAACAAAAACTAAGATACAAAGAGATGATCATAAACAAAATACATAAAGTGGCAGGGACAGGCAGATATAATTGAAGA TATTGGGCTTTGTCTCTGCTAAGAGAGACTTCACTTCCTTCTGTTATCCATCTTGCTGCATAAAACATCTCATGGGACCT TGGTAAGTTTGCTCCCCAATATTGACCTCTGATAATGACTGGATGTGGATCATATCAGAAGACCAGCAGAGTTGGCTGCC AGCATATTGCAGAAAAATGGTGTGAATGCAATAATTCATCATTTGGTGCCTGTTTCGTTGCAGAATTCAAGCCATATTTA TTCATTAATTGGCTTGCAATTCTAAGGACCAGACCACTTTTGCAGAAGGTATAACCCAATCTATGATCCATCAAGGGACA GGCCTATTTTACAGCTCTGTAAATAAAGATTATGGTCATGCGTAGAAGAAATTATTGAAGGAAAACAAAATAGTGAATGA GAGGATTCAACAATCACGGGATCCCAAGAGCAAGGAATTCCAATGTTACATATTGGTGTATATATTTTCTTTAAGCCTTG TTGTTTCAGGCTCCATTACTTGTGGATTCATTATGTAAAAGTTTTAAGGAATCAGAAATTTTACTTCAGATTTTATCCAT ACCATCCAACTCTTTGACAAAAATTGTGTCTAATTAATTAATATGATTCTGTTTTAATCAATTAGTGTCAATTATTAACA GAATGCATGATGGATTACATTGATAAATGAACACTTATGATGTAATATGTTAAATACTTTTCATTAAACCACTATTAATT AAAATTCTTACTACAGTTAGTCACAGTGGACTGGTATTGGATTAAATAAACTAGTTTTTGTTAAAGTAATTGATCTCAAT TGACTGGAAACATCTCATAAATGAGGATTGCTCCAACTGTGGACTGCATCCAAAATGGATAAAGTTTAGATAGCCCAAAT GATAACAAACATGGCCTTGTTTTGTGTCTGAATTGTGGCAATGTGAAATCACCTTTCCTAACTGGAGTTGGAGGAAAGAG AATCCAACATCCTAATCTGCTAACTTCTATCGTTATTCTCGTTTCATTAAATGCAAAAGGCTATTCCCCAAGACATGTAT GTGGCTATGGCCAAATACTTCAATCTCAGTTTGGTGACAGGAACTTCAATCATCAGTGGATTTGGTTTACACCTTCTTGC TCTTTATCCATTCTCTTTCGTTTTTTACAAACCATATATTATTCATAATTTTCTAAGACAATAAATTCTATGTGTTGATA TTAATCAAGAAATTCAATCTACAAAAGAAAATATGATGGTGTGAATTTGATAGCAATTGTAGTTTAGTGTTTCTATCCTT TTCAAAACTCAAAAATAGGAAGTTATTAGAAATTAAGGACCTTTTACTGTGTCAGCATTACATGTTGGGCATGATGTGAG AATGATTTGGCAATTCCCTTTCCATAAAACATTGTAGTATGTTGAAGAACATTCTTCCTTCTTGCTCCCAGAACACAATG CCACTTTCCATTTCTAACTTAAAACAATTTCATTTTCCTTGTTATTCATCCCAGTCAGCCATCTCACTTTACAACATACT TTGACCCAACATGTGATAAAGCATGAGCACCCTCTCTTAGAATGAAATGTTTTTGGTCTTCTCTTACAACTCAAATTCTT CAAAGCTGACTCAGCCATTCCAAAACAACACAATAAACTGATATATCTAGTTATATACATTCCTCATTAACAGGAAAAGC AATAGGTTGTGTTGCTTCCCACGTCCTAAACTCACCAAGTGTGCTATCACAGGTATAAGAAGTAGCATATTTCTCCTTTT CATTTTAAAGCTCTCTAACAAAGAGAGAGGATGAAACAAGCAAGCTCTTACTATCCTGATTTACCTTTCAACCATGCACA GAAAGTGAAAATGAGGTTAAGCAGAAACTTTGATTTGCTATTTGCAAACAGTGACAGCCACATGGGAGTGTATAGGATAT ACGTCACCATCTCTTTACTTTTTCTAACCTTCTTGCTAGAGGATTTAATGAAGGCTGACATCAGAAAGTTAAAAAGCCAG CTCAAAAAGCAATATAAGAAAAGGTTGTGGCAACACTCGACATCTGAGTCTATTTCAATTATGTTTATAAATAATAAACA TGAATTATGAGAATAATTAGTGAATTAGTTTCAATCATCATTATTAATTAATCTTATATTTTATTTTAACTAGTTATTGT AGAACAATATTTGACTTGTAAAACTTAAGTTGGTCAATAGGGATTGCCATACGTGTTGGTAAATGATATATCCTTGTTTT GTATCTTATAGTATGAGTATAACTTCTGATATATACGTGTTGGTTTCTGAATCCAGAATCTAGTCCTTATGTAATGGCTG CTATGTCCAAAAATTCCGTTGATTTGTTTCACTTTCTTGCTTTGAAGCTAGTCTATTAATTGGGCAATAAAAATTCTCTG TACCATGTTTTTCAAAACTGTTTCTGACATAGAGGTTTTATTTCCTTATTTCAATTAACCACTATGAAATCTTGCTCCTG AAGATATATAAACCTCTCTCTATGCCTCTAAAAACTAGCCCTATGAAGGTTTTCTTTTTTAAGTTTTATAAAAGTTGACA TGGATATCTCTGTAGCATCTTTTTCTAAAAGCAACCAAACAATCCATGATGTCAAAATATTATCTTGAATAACTGTCCCT CAAGTTGCCTTTGCAGGCATCTTTATTTGAAAAAAAGATAATGGTTGATGATCCAAGGTTGAGTCATCCCACCAAAGGCT CAAGATTCACTTCCAAGTTTCCATCCCTTTAAATACCTCCTTGGAGTTGAAGCGACTGATCAAACTCAATTGAGCATAGT TTCCTTAGTAATAGAGTAGCTCAGGCAATTCCTCTTCACCATAAAACAGAAACCTTAACTTAGCATATTCAACATGCAGA CCTCACTTTTTCATGAGCTAGTTGTTGGAACTCCAATCATGTCAACAACATATGATCAGGTTCAAAAGTCATTTAACAGA TACTTACCTGATCCTGCAACTCAGGGTCAATACCCAACCACAAGATCAAAACAAGGTAAGAGTTTCATTTACTTTAAAGA AAAACATCTAGTTTCATTATAAAGCATTGAAGGTTTTTCTAATCTCAAAGGCTTCAATGTTTCAGGGAGAGTATTTTATT CGATTAAGAACAAGACTGGAAGGAAGGAACATAGTCTTTCACAAAGAGTCCAAGAACATGGTGAGTATCCCTGTAAGCCT TAGAACTAGTTTGAATGCAGGCCGAAACATGGTGAAAGTATCTAATTCTATTCATATAAATTTGAAATTGCAGTGAGAGT AGGAGCAAATATATCTGAGACTATTAAGAGGAAGTTGAGCTTAGGGGCTCTTATTGTACAAGTTGGTGGAGTGGAGAAAG TCTTTAATCATAATTTTAGTGTAAAAGAAGGGGAGAAGCTGTTGAAAGTTTCACAGTGTTATCTTTCCACCACATCAGGA CCTCTAGAAGGTCTTCTTTTTATCTCCACAGAGAAGGTTGCCTTTTGCAGTGAGAGATCATTGAAAGTGTTTACTCAGAA GGGTCACATGCGTAGGATCCGCTATAAGGTATAAACTTCTTCATATCTCTCAGTTTCCCTTAATTCCTGATTTTATGAAG TTCTGAATGGTGTATGTCTCATGTTCATGTACAGGTTTCCATTCCTCTGAAGAAGATCAAGTGTGTGAACCAAAGTCAAA ATGTTGAGAAGCCAAAACAGAAGTACATAGAGATAGTTACAGAGGACAATTTTGATTTCTGGCTTATGGGTGTCATAAAT TATCAGAAAACCCTCCGGTATCTTCAGCAAGCAGTTTCTCAAGCTTAGATGAATGGAAAAATCCACAGTTTGAAGCATAA AGAGCCAAGGCTTGAAGCTTCATGTGGTCAGGGAAAAAACAAAAACTAAGATACAAAGAGATTATCAGAAAAAAAAACTA TATAAAGTGGCAGTTGCAGCTAAAATTGAAGATATTTGGCTTTTTCGGTGATAAGAGGGACTTCACTTCCTTTGATATTG ACCTTTGATAGTCATTGGATGTGGATCATATCAGAAGACGAAGCAGAGTTGGCTGCGAGCATTTTGTGGGAAGATGTTGT GAATGAAAGAGTTCAACATCTGGTGCTTGCTTTGTTAGACAACTCCCTATGATCCATCCAGAGACAGGCCTATTTTTGCC CTCTATGAAGGGAGATAATGGTTATGGTACAAGATCATATTGAAGGAAAAATACATAGTGAAAGAGTGAATTGAATTTTC ACAAGGAAATCCAATGTGTATATATTTGTGTATATAGTTTTCTTCAAGCCTTGTTGCTGATCTGTATAAGTTTCAGGCTC CATGTGGATTTATTTTTCATCATGTAAATGTTTTTAGGAATCAGAAAGTGTATTTCAGATTGTATCCACAATTCCATACC ATCCAACTCCTTGAAAAAATGTGTGATTAGTCAATTTGATTCTGCTTTAATTAGTGAGTTTAAATAATTAACAAAAAGCA TGATAGATTACATTGATAAATGAACACGGTAAGGGATATGATTTTCAGTAAAC
CDS sequence (LotjaGi5g1v0353700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGACCGCACTTCTTCATGAGCTAGTTGGAACACCAATCATGTCAACAACATATGATCAGGTTCAAAAGTCATTTAA CAGATACTTACCTGATCCTGCAACACAGGGGCAATACCGAACCACAAGATCAAAACAAGGGAGAGTATTTTATTCGATTA AGAACAACACTGGAAGGAAGGAACATAATCTTTCACAAAGTGTCCAAGAACATGTGAGAGTAGGGGCAAATATATCTGAA ACTATTAAGAGGAAGTTGAGCTTAGGGGCTCTTATTGTACAAGTTGGTGGAGTGGAGAAAGTCTTTAATCAGAATTTTAG TGTAAAAGAAGGGGAGAAGCTGTTGAAAGTTTCACAGTGCTATCTTTCCACCACATCAGGCCCTCTAGCAGGTCTTCTTT TTATCTCCACTGAGAAGGTTGCCTTTTGCAGTGAGAGATCATTGAAAGTGTTTACTCAGAAGGGTCACATGCGTAGGATC CGCTATAAGGTTTCCATTCCTCTGAAGAAGATCAAGTGTGTGAACCAAAGTCAAAATGTTGAGAAGCCAAAACAGAAGTA CATAGAGATAGTTACAGAGGACAATTTTGATTTCTGGCTTATGGGTGTCATAAATTATCAGAAAACCCTCCGGTATCTTC AGCAAGCAGTTTCTCAAGCTTAG
Protein sequence (LotjaGi5g1v0353700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTALLHELVGTPIMSTTYDQVQKSFNRYLPDPATQGQYRTTRSKQGRVFYSIKNNTGRKEHNLSQSVQEHVRVGANISE TIKRKLSLGALIVQVGGVEKVFNQNFSVKEGEKLLKVSQCYLSTTSGPLAGLLFISTEKVAFCSERSLKVFTQKGHMRRI RYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVINYQKTLRYLQQAVSQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 218 | 214 | 2.0E-92 | – | |
| PANTHER | 5 | 218 | 214 | 2.0E-92 | ||
| Gene3D | 97 | 219 | 123 | 1.4E-5 | ||
| Pfam | 100 | 219 | 120 | 3.1E-14 | ||
| SMART | 100 | 178 | 79 | 3.0E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0353700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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