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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0358800 |
| Transcript ID | LotjaGi5g1v0358800.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C-like protein; TAIR: AT1G43900.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11; TrEMBL-Plants: tr|I3T109|I3T109_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0358800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67330427..67334157) extracted from Lotus japonicus Gifu genome v1.2.
TTGTTGAAGAATGATCTCAGACACAGAACCTGAAGAACACGCCAACGCGGCCACCGTTGCCGGAAAATCCTCTGCCGGTT TTTCCTTTGATGATCATCTCGCACCGCCGGCAGCTCCAAACATTGTCATGTCCTCCAAGGATCACGATTCTCTCTTCAGT GGTGGCGGTATCAGGTTGCTATTTGGATTGCTTGATTCTGAGCTATTCTTTCTCTTGATTCTCTTTTCTATTCATTTCTG GATGTTTGAATTCATTGAATTGATCATAGAAATGAACGGTGTCGTTTGTTCTTAAGATGGTTAGGAAATTAAGATAGCTG ATTCCTGAAATTGGTTTCTGAATTGCATTGTAAATTTTCAATGTCATCGTTTAGACTATATATAATTATGTGTTATGATA CGACTATGTATACTTTGATATTTTTATGAATTATATACTTATATGTTATGACTATCTCATACTAGTTTTTGAATGATTGG CATTTGGTCTGCTCCTTCTTGCTATTGAAAAATGTTGAGAATGAATGACATTTTAATTTCTATATGTATGTTGCAGTTAG TTAGGTATTACCTTTTATGGCTTTACCATGCATCTTTCCTTTTATAAAGTAGGGTTGTCATAGCGCGCTAAAGCAGCGCT TTATGTAGCGGTGCCAGTGATTACTCCTAGTCGTTGTGTAGCGGGGCAGTTTAGTGTAGCACGATCTTTGCGGCCGCTTA AGTGGAGGAAATTACGGGCAGCGCTATTTGGCGGGATTGATGAAAACCCAAAATATGCCCTCACAAAGTTAATGTTTTGG CATTTTTGGGAAGTGTTCACTCAGTTGAATGATTATTTGATATATACAGCATAATCTTTTCGGAACAGGGAAAATATCAT GGAAAAGTGTGATGATGACATAACTGTTTGCTTACTATTAACTGTCAATAATAGGAATCTTTTTATTAAATTTCTGTGAA GAAAAACCTGGGACTTGTGAAATTTTGTTGCTGGACCGAGTGTAGTAACTTGGTAAAAACAATGGCTAATGGCAAGAATT TGTGCCAGACCTAGCTTGAGAGGCTGCACCAATTATAGGTGTCATAGGCTGGGGTGTTGAGCATAGTGAATCCTTGAGGT GAATTAAGCTGAACCCCCCCAACCCCCGAAGTGCGTTGTTGTCCCTTTTGTGTTATATAACAGCCTTCCAACTTTCAAAT ATTTAAAAATTTGAAAATGAGTAACTTGCATTTATTTCTGTTTAGCCTTCTGTCTGGAAGTCGAAATGGAAGGTTCAGCT ATGGATATTCCAGTTTCAAGGGTAAAAGATCTTCAATGGAGGATTTTTTTGAGACCAGAATATCAGAAGTTGATGGTCAG ATGGTTGCCTTTTTCGGTGTTTTTGACGGTAAGTTTTAGGTTTTTATTTTGCATCCCTTAAAATTAATCCTTTAGCCTCC CCGCTCCCCAATTTTGTTTGATGGGCTTGATGATTCTGTTTCCCTTTTGGTTTTCTGCCATCTTTATTGTCTTTGCTATT GGGTTTATTCTATTGGTGCGATTCTTTCTGTCATAGGATCATTTGTGACTATAAGACTCTCTAAAGTAAACAAGGGTGTA TTCCCAATTTAGATAATTTTATGTGTATAATTATGTTAACACACTAAATTTTGTGGGTTGATATGCCCTTGTTCATGTAA TAGATAAACTCACTTTAAAAGTCATTTTCAATATGTTATGGGTTTATGGTGGCTATTGTGTAGGTTTTGAATTTGTTGAG GGAGGGGTTTAAGGTTCCGTGATTAGGTTAGAAATTTAGAAGTGACAGAATAGCAGAAATAGGCATGATAGATGATCGCC CGTTGGAATTATTAGACAGAAGCAGAAATAGGACTTGTAGATTGAGGAAAAGGAATTTATATAGCGGCTGATGATATGGC TTATGGTTCCTGATTAGACAAGCATTCCTATAAAATTGGGAGAAGAAAATCAAATTACTCATAACAATGATTGTATCCAA TCATTTTATGATCAGAAAATGAAAGAAAGTCGCCAATGCTCAATACAGCAAAGATGGAGCTGTAATACCCAAACCTTTTT GGGGTTGATTTTCAATTCCGTAATAAAATTGGAAAGCATGTAGGTTATTTCATATTGGCATGTCCGTTTCGTGCATATCT TTGACGTTATTTATTTATTTTAATCTTTTTAGGTCACGGAGGTTCTCGGACTGCAGAATACCTGAAAAACAATTTGTTTA AGAATTTGAGTAGCCATCCCGATTTTATCAAAGACACCAAGACCGCAATTGGTAGGAGCTTCATTTATCTAAAATTATAT ATGTAGTGAAATTCTCATATAACATTATAGTTGTGTGGTTTGTTACCTGGATGGTCTAAATATGAACATATGTTTGTTCT AATTGTTTGTCTTGTTACAGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAAGGACATCAAAGGG ATGCTGGGTCCACTGCATCAACAGCTGTATTGTTGGGTGACCGCATTCTTGTTGCAAATGTTGGCGATTCCCGAGTAGTT GCGAGTAGAGCTGGTTCAGGTTGGTGCCATGTGAATTAGGGGTGAAAGAATTAGATTTACATTGGGCAGGATATGCATTT TTAATTGGGTGGTGAATGGAGGGATATGCAACATATTTCCTTTCCCTGTAGTACACTGTCAAACATGGTTTTTGGTTATG TCAGTTTTGCTAAGTTACGGGCTTCATGCTTTTGCAACATACACTAAAATTTCAAATTGCTTTTAGTAGTTTTTTTGTTG AGATCCTACATCGACTAGAAATATGACTGAAGTATATCTTAGCTAGGACATTGGGTCTATGGGTTTCTAATCTTTTATCT AGCTCATTGCTAACCAATGTGGGCTTCAAGCTCACACTTGAGTTCCCAACACAGCTCAAGAAGCAATATAATTTCCTATA TCCGTCCCTCCTTTCCCCCTATTATCTGATATAAATGTTTGTGTTTCACTGCAGCTGTTCCTTTGTCCGTTGATCACAAA CCTGATAGATCTGATGAGCGTCAAAGGATTGAGCAGGCTGGGGGATTCATAATTTGGGCAGGTAAATGTCCATCCTTTAT GGGTGTTTCCTATTTTTTATGGTTCATAGTAAATTACTTTCTCTATTGCTGGTTAATCCAGGAACCTGGAGGGTTGGTGG TGTTCTTGCTGTTTCTCGTGCATTTGGAGATAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGTTGCCT AAGATCTTAAGTTTTGTCACCCTTTGCCATACCTGTGTTGTTATAGATCTTCTATCCGCTAACTTATCCCCCTTTTTGGC ACTGGTTTGGCCCAGGAGGAAGAGATTGATGGTGTAGATTTTATAATAATAGCTAGTGATGGTCTTTGGAATGTCATATC AAACAAGGTGAGGCTGGAAGTGTTTATTTTGAAATTTAAATTTGTGTTCTCGATTTTATTAGTTATTTTTTAGGCCTATG AATGTTAACATTTTAAAGTAATTTGGGAAAAAATTCTTCAATGGAACCTAAGCATCTGATTATGCCATCCCTGCCTTTTC AGGAAGCGGTGTCTTTGGTACAAAATATCACAGATGCGGAAGTGGCATCCAGAGAACTAATTAAAGAAGCATATTCACGA GGAAGCTCAGACAACATCACTTGTGTTGTTGTTCGATTCGATCTATCCTGA
CDS sequence (LotjaGi5g1v0358800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCTCAGACACAGAACCTGAAGAACACGCCAACGCGGCCACCGTTGCCGGAAAATCCTCTGCCGGTTTTTCCTTTGA TGATCATCTCGCACCGCCGGCAGCTCCAAACATTGTCATGTCCTCCAAGGATCACGATTCTCTCTTCAGTGGTGGCGGTA TCAGGTTCCTTCTGTCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGATCTTCAATG GAGGATTTTTTTGAGACCAGAATATCAGAAGTTGATGGTCAGATGGTTGCCTTTTTCGGTGTTTTTGACGGTCACGGAGG TTCTCGGACTGCAGAATACCTGAAAAACAATTTGTTTAAGAATTTGAGTAGCCATCCCGATTTTATCAAAGACACCAAGA CCGCAATTGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAAGGACATCAAAGGGATGCTGGGTCC ACTGCATCAACAGCTGTATTGTTGGGTGACCGCATTCTTGTTGCAAATGTTGGCGATTCCCGAGTAGTTGCGAGTAGAGC TGGTTCAGCTGTTCCTTTGTCCGTTGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAGCAGGCTGGGGGAT TCATAATTTGGGCAGGAACCTGGAGGGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGAGATAAACTTCTTAAGCCA TATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAGATTGATGGTGTAGATTTTATAATAATAGCTAGTGATGGTCTTTG GAATGTCATATCAAACAAGGAAGCGGTGTCTTTGGTACAAAATATCACAGATGCGGAAGTGGCATCCAGAGAACTAATTA AAGAAGCATATTCACGAGGAAGCTCAGACAACATCACTTGTGTTGTTGTTCGATTCGATCTATCCTGA
Protein sequence (LotjaGi5g1v0358800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISDTEPEEHANAATVAGKSSAGFSFDDHLAPPAAPNIVMSSKDHDSLFSGGGIRFLLSGSRNGRFSYGYSSFKGKRSSM EDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGS TASTAVLLGDRILVANVGDSRVVASRAGSAVPLSVDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKP YVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYSRGSSDNITCVVVRFDLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 313 | 294 | 4.5E-156 | – | |
| PANTHER | 20 | 313 | 294 | 4.5E-156 | ||
| SUPERFAMILY | 56 | 313 | 258 | 2.09E-78 | ||
| SMART | 57 | 310 | 254 | 4.1E-93 | ||
| Gene3D | 62 | 314 | 253 | 1.5E-86 | ||
| CDD | 66 | 312 | 247 | 2.0925E-93 | ||
| ProSiteProfiles | 67 | 312 | 246 | 52.025 | ||
| Pfam | 68 | 305 | 238 | 3.3E-62 | ||
| ProSitePatterns | 98 | 106 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi5g1v0358800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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